Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20culicifacies_20[genbank_20GCA_5F000473375.1_202013-09- 30] 16,162 sequences; 202,998,806 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2 138 1e-27 seq1735 96.9 4e-15 >seq2 Length=295332 Score = 138 bits (152), Expect = 1e-27 Identities = 674/1049 (64%), Gaps = 35/1049 (3%) Strand=Plus/Minus Query 113698 TTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCACATCCTTC-ATCT 113756 ||| |||||||| ||||| || ||||| || ||||| | ||| ||| || | | Sbjct 211940 TTGTGATTGATCAATGAATGCACCTCGATCGGCAGCCATTTTAATG-CATGTTTTTACCG 211882 Query 113757 TGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTT 113816 |||||||||||| ||| |||| |||| || || | ||| || | || ||| Sbjct 211881 AGATTTCCCACACTGTTTTGTACAGGTCACGGATCTCTTTTGGAATTGTTTCTATGCTTT 211822 Query 113817 GGATGGAGCCACCCGCCTTGACCA--TGAGATCCTTCATATCCTTTGACCAGAGACCAAT 113874 ||||||| ||| | ||| | || | ||||||||| ||| || || || Sbjct 211821 GGATGGATCCATTAT--TGGACAAGATGTTGTTCTTCATATCGAGATCCCACAGCCCCAT 211764 Query 113875 CTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCG 113934 | | ||||| | || |||||| | || || || ||||| |||| | || Sbjct 211763 CGCAGTCAGATCTTGCAGGAGATGATGGTTCACCACCTGGAACTCGCCCGACAACACACG 211704 Query 113935 TCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGC 113994 || ||| | || | ||||| ||||| || |||||||||| ||||| ||||| || Sbjct 211703 TCGATTATAAACGTTCGATGTGTACGGCTCGAAAGACTCATTGTTGCCCAATATTTGCGC 211644 Query 113995 GGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTT-TTCCCTAA 114053 || || || || ||||| || |||| || | ||||| | || | || ||| Sbjct 211643 CGTTGAAGCGGTCGGCATCGGAGCCAAAAGTAATGAATTACGAATTCCGTGCTTTGCTA- 211585 Query 114054 TGCGTTCCTTGAGGGCGTCCCAGT--CGTAGTTGAGCTTTGTCTCCCCCTGCCACATATC 114111 | ||| || | || |||||| | ||| | | | | ||| | |||||| || Sbjct 211584 TCTTTTCTTTTAACTCGGCCCAGTTCCATAGATCCG--TCGGTTCCTTGTTCCACATTTC 211527 Query 114112 AAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAAC 114171 |||| | | |||| | | || ||| ||| | |||||||| || || || Sbjct 211526 GTACTGTAATACGCCTTTGCTTACCGGACTTCCTTCATACGTCTCGTACGGACCGTCCCG 211467 Query 114172 CTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGC 114231 || || || ||| | ||||| || || || | | || || || ||||| || | Sbjct 211466 TTCGGCTAACTCGCAACTCGCTTCCAGCGCACCATAGTAAATGGTTTCAAATATTTGTTG 211407 Query 114232 ATTCATTGCCTT--GGCCTCGTCGGAATCAAACGCGAGTCGGCAC-AAAATAAATACATC 114288 ||||| || || |||||| ||| || ||| || ||| ||||| ||| |||| Sbjct 211406 ATTCA--GCTTTTGGGCCTCTTCGCTTTCGTACG-GATAGCGCATTAAAATGAATGCATC 211350 Query 114289 CGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGT 114348 || | |||||| ||||||| ||||| || | || | ||| ||||| || | Sbjct 211349 GGCCATACCTTGCACACCGATTCCAATGGGCCTGTGGCGCATGTTAGAG---CGCTTCGC 211293 Query 114349 CTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTT 114405 |||| || ||||| | || ||||||| | | || ||||| || |||| ||| Sbjct 211292 CTCCGGTACTGGATAGTAGTTGATATCGATTATTTTGTTCAGATTGCGCGTCACAATCTT 211233 Query 114406 TGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCT--CTTCATTGACATACTTA 114463 | || ||| | ||||||| | |||| || | | |||| ||| | |||| ||| Sbjct 211232 AGCGACTTCCTTAAGCTTTACAAAATCGTAAGT-CTTGTCTGTCTTTACGAACATGTTTA 211174 Query 114464 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 114523 || ||||| || |||||||||||||| | | || || || | |||||||| | Sbjct 211173 GG----GCGATCGAAGCCAGATTACACACTGCAATTTCGTCTTTCGATGAGTACTCTACA 211118 Query 114524 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 114583 || || || ||||| || || | ||| |||||||| | |||| |||||| | ||| | Sbjct 211117 ATCTCTGTGCACAAGTTAGAGCACTTTATGGTGCCAACATTCTGTTGATT-GCTTTTACG 211059 Query 114584 -TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAAT 114642 || || ||||||||||| ||||| || || ||||| ||| || || | | || Sbjct 211058 ATTGCATGCATCCTTGTACAGCATATACGGTACGCCCGTTTCCACCTGCGATTCAATGAT 210999 Query 114643 AGCCTTCCAGACATCGGCGGCTGGCACAGTGGCG-TTGGCTCGCCCCTCCTCCTCGTACT 114701 || | ||| | ||| || || || || || ||| ||||||| |||||| Sbjct 210998 TGCATACCACAAATCCTGTGCCCTTAC-TTGTCGAATGAATCGTCCCTCCTTCTCGTAAC 210940 Query 114702 TTGTGTAGAGGGCTTCAAACTCTTCACCC 114730 ||||| || | || |||||||||||| Sbjct 210939 GCGTGTACAGTGTCTCGAACTCTTCACCC 210911 >seq1735 Length=22919 Score = 96.9 bits (106), Expect = 4e-15 Identities = 153/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 171879 TTGTGAAGATGTACCTCGTTTGAGACGCA-TCTTTGCCACCCATGAGACGCGTCCCAAAT 171937 ||||||| |||||||| | || ||| || || || ||| | | |||||| || || Sbjct 7248 TTGTGAAAATGTACCTAGGACTAG-CGCTGTCCTTTCCGCCCGTCAAACGCGTACCGAAC 7306 Query 171938 TGACCACACGGTTCAAGGAGATTGATATTGTTTGAACCCATGTAGTCATTGGCCAACTTG 171997 ||||||| ||| | || |||||||| ||||| || | ||||| | ||||| ||| Sbjct 7307 TGACCACCCGGATAGAGCAGATTGATGTTGTTGCTTCCGACGTAGTTCTGCGCCAAATTG 7366 Query 171998 ACAATCGTATCCGCGAGGGAGACT--TCACCGTGATGGTAGGCCGACTTGTCCGCGACAT 172055 || ||||| | || | |||| ||||| ||||||||||| || || ||||| || Sbjct 7367 ACGATCGT--CGAACAGAGCGACTGCTCACCATGATGGTAGGCAGATTTCTCCGCAACCG 7424 Query 172056 ACGCCGCCAACTGTGCCACCTTCATCTCATCCTTG 172090 | | || | ||| |||||||||| |||| |||| Sbjct 7425 ATCCAGCAAGCTGGGCCACCTTCACCTCACGCTTG 7459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597232919638960