Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20culicifacies_20[genbank_20GCA_5F000473375.1_202013-09- 30] 16,162 sequences; 202,998,806 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 6e-12 >seq2 Length=295332 Score = 86.0 bits (94), Expect = 6e-12 Identities = 215/327 (66%), Gaps = 0/327 (0%) Strand=Plus/Plus Query 93994 CTCAAGGACTGTGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGAC 94053 || ||| | |||||| || ||||||| || || ||||| ||| | | ||| ||| Sbjct 210525 CTAAAGCAGTGTGCGCTGATTTCAAAATCAGCAGGCGGAATTGGGCTGAATGTTCACTGT 210584 Query 94054 GTACGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCT 94113 | || || | ||| | |||||| || || || || | || ||||| | || || Sbjct 210585 ATTCGCGCGAAGGGAACGTACATCTCAGGCACGAACGGGATTTCGAACGGGTTGGTACCG 210644 Query 94114 ATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAG 94173 ||||| || || | ||||||| | || || || ||||| |||||||| | | | Sbjct 210645 ATGCTGCGAGTGTACAACAACACAGCCCGATATGTGGATCAGGGTGGCAACAAACGACCG 210704 Query 94174 GGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTG 94233 || |||| || | || ||||| || ||||| | || || | || | || ||| Sbjct 210705 GGAGCTTTTGCCATATACCTCGAACCATGGCATGGTGATGTATTCGAGTTTCTGGATCTG 210764 Query 94234 CGAAAGAACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTG 94293 || ||| |||||| || || | | || | ||| | ||||||||| | ||| | Sbjct 210765 AAGAAAAACACCGGCAAGGAGGAGGTGCGTGCACGTGACATGTTCTACGCTTTGTGGATA 210824 Query 94294 CCAGACCTTTTTATGAAACGCGTCGAG 94320 || || || ||||||||||| || ||| Sbjct 210825 CCGGATCTGTTTATGAAACGGGTAGAG 210851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494623253545520