Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20culicifacies_20[genbank_20GCA_5F000473375.1_202013-09- 30] 16,162 sequences; 202,998,806 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2 98.7 1e-15 >seq2 Length=295332 Score = 98.7 bits (108), Expect = 1e-15 Identities = 322/494 (65%), Gaps = 10/494 (2%) Strand=Plus/Minus Query 109961 CCTTGAAAC-TCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCC 110019 |||| | || ||||||||| || || ||||| |||||| | || || || || Sbjct 211495 CCTTCATACGTCTCGTACGGACCGTCCCGTTCGGCTAACTCGCAACTCGCTTCCAGCGCA 211436 Query 110020 GCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAG 110079 ||| || || || ||||| || || ||||| | | |||||| | ||| | Sbjct 211435 CCATAGTAAATGGTTTCAAATATTTGTTGATTCAGCTTTTGGGCCTCTTCGCTTTCGTAC 211376 Query 110080 GGA-AGACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCG 110138 ||| || || || ||| || |||| || | ||| || ||||||| |||||||| | Sbjct 211375 GGATAGCGCATTAA-AATGAATGCATCGGCCATACCTTGCACACCGATTCCAATGGGCCT 211317 Query 110139 ATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCG 110198 || |||||||||||| || ||| || || ||||| ||||| | Sbjct 211316 GTGGCGCATGTTAGAGCGCTTCGCCTCCGGTACTGGATAGTAGTTGATATCGATTATTTT 211257 Query 110199 ATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTT 110258 || ||||| ||||||| |||| | || ||| | || || | ||||| | || || Sbjct 211256 GTTCAGATTGCGCGTCACAATCTTAGCGACTTCCTTAAGCTTTACAAAATCGTAAGTCTT 211197 Query 110259 CGTCT--CCTTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTC 110316 |||| | ||| |||| ||| ||| || | || || ||||| ||||| | | | Sbjct 211196 -GTCTGTCTTTACGAACATGTTTAGGGCGATC----GAAGCCAGATTACACACTGCAATT 211142 Query 110317 TCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCC 110376 |||||||| | ||| || | ||| || || |||||||| || | ||| ||| || Sbjct 211141 TCGTCTTTCGATGAGTACTCTACAATCTCTGTGCACAAGTTAGAGCACTTTATGGTGCCA 211082 Query 110377 AAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCA 110436 | |||| ||||| ||| |||||||||||||| || ||||| || || || Sbjct 211081 ACATTCTGTTGATTGCTTTTACGATTGCATGCATCCTTGTACAGCATATACGGTACGCCC 211022 Query 110437 GTTTCCGTCTGTGA 110450 |||||| ||| || Sbjct 211021 GTTTCCACCTGCGA 211008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588857012123600