Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20culicifacies_20[genbank_20GCA_5F000473375.1_202013-09- 30] 16,162 sequences; 202,998,806 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq2186 84.2 3e-11 >seq2186 Length=26607 Score = 84.2 bits (92), Expect = 3e-11 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 154929 TGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCA 154988 ||| || |||| || | | || || ||||| ||||| || || || || | || || Sbjct 11165 TGTGAGCTCGTACACAAGCACGGCGGCCAGGTGTATCTGGACGGGGCGAACATGAACGCT 11224 Query 154989 CAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACAT 155048 ||||| ||| | ||| |||| | ||| ||||| | ||||| ||| | || Sbjct 11225 CAGGTGGGATTGTGCCGACCGGGTGACTTCGGTAGTGATGTGTCCCATCTGAACCTGCAC 11284 Query 155049 AAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 ||||| ||||| ||||| ||||||||||| ||||| ||| | ||||| || ||||| Sbjct 11285 AAAACGTTCTGCATTCCTCATGGAGGTGGTGGTCCGGGCATGGGTCCGATCGGTGT 11340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579095784534080