Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20culicifacies_20[genbank_20GCA_5F000473375.1_202013-09- 30] 16,162 sequences; 202,998,806 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq1607 89.7 7e-13 >seq1607 Length=23855 Score = 89.7 bits (98), Expect = 7e-13 Identities = 180/262 (69%), Gaps = 4/262 (2%) Strand=Plus/Plus Query 197023 AGATCCTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACATCTGGTTGTCG 197082 ||||| || ||| ||| || ||||||||||| || || | | ||| | ||| ||| Sbjct 666 AGATCTTCATCGGAAAATCCAGTACCGATCTTGCAGATCGTCTGATACTCTTCGTTCTCG 725 Query 197083 GGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTG 197142 | |||||||||||| | ||| | ||||| ||||| || | |||| |||| | | Sbjct 726 TCGTCGTAACAGGCGAGCAGGAATCCACCGTACGTTCCGGTACGCTTT-CCACGTCCACG 784 Query 197143 A-AGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTT 197201 | | || ||||| || |||| ||| || | || | || || | || |||||||| Sbjct 785 ATAACCGCCGATCACGACCAAATCGAGCGAATCACCTACGCCGGTGAGATAGTCTTTCTT 844 Query 197202 CAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGT-CCAGGG 197260 ||| || | |||| | | || | || || |||||||| ||||| | ||| |||| | Sbjct 845 CAGCTTCAACCAGTTGCGGGACCGTTTCGCGATCTCGTACGTTGC-CTCGCGTGCCAGCG 903 Query 197261 TCTTGATCATCAATCCCTCGCA 197282 | || | ||||| |||||||| Sbjct 904 TTTTCACCATCAGCCCCTCGCA 925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676592883702560