Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20culicifacies_20[genbank_20GCA_5F000473375.1_202013-09- 30] 16,162 sequences; 202,998,806 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq9121 170 3e-37 >seq9121 Length=5000 Score = 170 bits (188), Expect = 3e-37 Identities = 351/520 (68%), Gaps = 4/520 (1%) Strand=Plus/Plus Query 47788 CCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCG 47847 || |||||||| |||||||| || || | || || || | ||| | |||||| || ||| Sbjct 3793 CCCGTGGCAATTACAAAATCTTCCGGCTTGTCCTGCTGCATCATGAGCCACATCGCTTCG 3852 Query 47848 ACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAG 47907 || |||||| |||| || ||||||||||| | ||| ||||| || || | | | Sbjct 3853 ACGTAATCTTTGGCGTGGCCCCAGTCACGTTTCGAATCCAGATTGCCCAGCTCCAGGTAT 3912 Query 47908 TCTTGCTTACCTTCAGAGATTGCTTTT--AATGCTCTTGTAATCTTACGAGTTACAAAAG 47965 ||||||| || || ||| ||| | | | || || || || || |||||| Sbjct 3913 TCTTGCTGTCCG--AGCGATATCTTCGCCACCGAGCGGGTTATTTTGCGTGTGACAAAAT 3970 Query 47966 TTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGT 48025 |||| || || | || || || |||||||| ||||| ||| | || || |||| ||| Sbjct 3971 TTTCCCCCCGGCGCGGCGACTCGTGATTAAACAGAATCCCATTGCAAGCGAACATATCGT 4030 Query 48026 ATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAG 48085 | | ||| |||||||| | || |||||||| || || | || ||| | || || | Sbjct 4031 ACGCTTCGCGATAGTTTATCACAATCCAGTATCCGTACATCTTCGCACAGGCGTACGGCG 4090 Query 48086 AACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTT 48145 | ||||||||||| || || |||| |||| || ||||| |||||| || || || | Sbjct 4091 ACCGTGGATAGAATGGAGTCTTCTCGTTCTGCGGTGTCTCGGCCACCTTTCCGTACAGCT 4150 Query 48146 CACTGGTGGATGCTTGATAGATACGAACCCTATCTTCCATCTCAAGCAAACGGACTGCCT 48205 | ||||||||||| |||| || || | | ||| | | ||| | || | Sbjct 4151 CGGACGTGGATGCTTGGTAGAAGCGGACAGTTTTCTCCTGTCCGACTGTACGAATGGCGT 4210 Query 48206 CAAGCACTCTCAGGGTGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTCAAACG 48265 | |||| | || || || | ||||||| || | || || ||| || || |||| Sbjct 4211 CCAGCAAACGTAGCGTACCGACGGCATCTACCTCGGCCGTGTATTCGCTCAAATCGAACG 4270 Query 48266 AAACCTTTACATGACTCTGTGCCCCAAGATTATAAATCTC 48305 | | ||| || ||||| ||||| | ||||| ||||| || Sbjct 4271 ATATCTTGACGTGACTTTGTGCGGCCAGATTGTAAATTTC 4310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665359953493840