Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20culicifacies_20[genbank_20GCA_5F000473375.1_202013-09- 30] 16,162 sequences; 202,998,806 total letters Query= NC_021799.1 Length=57447 Score E Sequences producing significant alignments: (Bits) Value seq13031 158 4e-34 >seq13031 Length=2327 Score = 158 bits (174), Expect = 4e-34 Identities = 170/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 10713 ATGGCTAAGGAATTACCGTATTTTCAGTTTGAACCGGCAGAGTATCTAACTAAAGACGTT 10772 ||||| |||||| |||| |||||||| ||||| || || || ||||| || ||||| || Sbjct 1990 ATGGCAAAGGAACTACCTTATTTTCAATTTGAGCCTGCTGAATATCTCACAAAAGATATT 1931 Query 10773 TCCTTTTGTTCATTAGCGGCTCAAGGATTGTTTATAAATATATGCTCGTATTATTGGCAA 10832 || |||||| | ||| ||||||| ||| | ||||| ||||| ||||| |||||||||||| Sbjct 1930 TCATTTTGTACTTTATCGGCTCAGGGACTATTTATTAATATTTGCTCTTATTATTGGCAA 1871 Query 10833 AGAGAATGTAAACTAAATCACAAGCAGTTTATAAGAAGATTTAATTACCAAGAAGAGTTT 10892 || |||| | || | | | || || ||| |||||||||||| | || || ||| Sbjct 1870 AGGAAATGCGATTTATCTAAAATTCAATTCCTAAAAAGATTTAATTATAAGGAGGAATTT 1811 Query 10893 GACGAGTTAATTTCTGAGGGTGTAATAGATTTAGATGATGATAAA 10937 |||||| | | ||||| |||| |||||||| || |||||| Sbjct 1810 GACGAGCTTTTAAACGAGGGAATAATTGATTTAGAAGAGGATAAA 1766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 183673541918196