Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20culicifacies_20[genbank_20GCA_5F000473375.1_202013-09- 30] 16,162 sequences; 202,998,806 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq2169 111 3e-19 >seq2169 Length=21917 Score = 111 bits (122), Expect = 3e-19 Identities = 212/310 (68%), Gaps = 2/310 (1%) Strand=Plus/Plus Query 182995 CTCGAAAAGGCAGAAACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGA 183054 || || | ||| |||| || ||| ||| ||||| | | || | |||||| || | Sbjct 3659 CTGGAGACGGCCAAAACGCACGACGATCTGTGGAACTCGGCCCAGCTGCAGATGGTGCGG 3718 Query 183055 GAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACA 183114 ||||| || ||||| | ||| | || ||||||||||| || |||||||| || ||||| Sbjct 3719 GAAGGCAAGATGCACGGCTTTCTGCGGATGTACTGGGCGAAGAAGATACTGGAGTGGACG 3778 Query 183115 AGAACTCCGGAAGATGC-TTTGAGTTATAGTATCTATATGAACAATAAGTACGAACTAGA 183173 | ||| ||||| || || | ||| | |||||| ||||| || |||| || || Sbjct 3779 AAAACACCGGAGGAGGCGCTCGAGACGGCG-ATCTATCTGAACGATCGGTACAGCCTGGA 3837 Query 183174 CGGTACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGATAG 183233 || ||||| ||||| ||||| || || |||||||| || ||| |||||||| Sbjct 3838 TGGGCGCGATCCGAACGGGTACGTCGGGTGCATGTGGTCGATCGCGGGAATACACGATCA 3897 Query 183234 AGCGTGGAAAGAAAGACCTATATTTGGAAAGATAAGATATATGAATTATGAGAGTTCTAA 183293 | ||||| || | || ||||| || || | || ||||| |||||| | | || Sbjct 3898 GGGATGGAAGGAGCGGGAAATTTTTGGCAAAATTCGTTACATGAACTATGAGGGCTGCAA 3957 Query 183294 GAAGAAATTT 183303 | |||||| Sbjct 3958 GCGTAAATTT 3967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903228688352320