Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20culicifacies_20[genbank_20GCA_5F000473375.1_202013-09- 30] 16,162 sequences; 202,998,806 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1793 109 4e-19 >seq1793 Length=24512 Score = 109 bits (120), Expect = 4e-19 Identities = 187/270 (69%), Gaps = 6/270 (2%) Strand=Plus/Minus Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTC---TGG 19604 ||| |||||||| || | |||||| | || || || || || | || | ||| Sbjct 4356 TTTACACATTATCATTTTTGATGAAATTGATGCGATTTGCAAAGCTCGTGGAACGGTTGG 4297 Query 19605 TGTAAAT---GGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGT 19661 || ||| || |||||||| || |||||||||||||| || ||||| | ||||| || Sbjct 4296 TGGCAATTCCGGTGTACATGATACGGTTGTCAATCAACTGTTGGCAAAAATTGACGGAGT 4237 Query 19662 TAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAG 19721 | | || |||| |||||| | ||||| |||||||||||| || ||| | ||||| Sbjct 4236 TGAACAGTTGAACAATATTCTGGTTATCGGCATGACTAATCGAAGGGATATGATAGATGA 4177 Query 19722 CGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATG 19781 || | || || || ||||| | ||| || | || ||||| | | | || ||||| Sbjct 4176 AGCTCTTTTGCGTCCTGGTCGACTAGAAGTACAAATGGAAATCAGCCTTCCGAATGAAGA 4117 Query 19782 TGGACGTGTGGAAATTTTAAACATACATAC 19811 || || ||| ||||||| ||| ||||| Sbjct 4116 AGGTCGAGTGCAAATTTTGTCCATTCATAC 4087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397377711352810