Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20culicifacies_20[genbank_20GCA_5F000473375.1_202013-09- 30] 16,162 sequences; 202,998,806 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq78 84.2 2e-11 >seq78 Length=100849 Score = 84.2 bits (92), Expect = 2e-11 Identities = 217/328 (66%), Gaps = 2/328 (1%) Strand=Plus/Plus Query 34403 GGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGAAGCG 34462 ||||| || ||||| || |||||| | || ||||| || |||| || | | Sbjct 92544 GGCCCAGTTTACGGCTTTCAGTGGCGCCATTTTGGCGCAAAGTACAAAACATGCCACGAC 92603 Query 34463 GACTATTCGGGACAGGGAGCGGACCAGCTG-CAGTACGTGATCGACACCTTGAAGCGGAA 34521 || || | ||||||||| |||||| || ||| | ||||| ||| | || || Sbjct 92604 GATTACACAGGACAGGGAATCGACCAGTTGGCAGAA-GTGATTCACAAAATAAAAAACAA 92662 Query 34522 CCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGC 34581 ||| |||| | | ||| | ||| |||| ||||| || || | || ||||| Sbjct 92663 TCCTTATGATCGTCGAATCATCATGAGCGCTTGGAATCCTTCCGACATTCCCAATATGGC 92722 Query 34582 GCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCA 34641 || || || || ||| | ||||| | || || ||||||||||||| ||||| Sbjct 92723 CCTACCGCCTTGTCACTGTTTGGCACAATTTTTTGTTGCTGATGGGGAGCTGTCTTGCCA 92782 Query 34642 GCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGC 34701 | | ||||| ||||| | || | || || || || || || |||||||| || ||| | Sbjct 92783 GATGTATCAGCGATCAGCCGATGTCGGTTTGGGTGTACCTTTTAACATTGCAAGCTACTC 92842 Query 34702 TCTGCTCACGTACATGATCGCTCATGTC 34729 |||| || | |||||||| |||||| Sbjct 92843 CTTGCTAACCCATATGATCGCACATGTC 92870 Score = 84.2 bits (92), Expect = 2e-11 Identities = 217/328 (66%), Gaps = 2/328 (1%) Strand=Plus/Minus Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 |||||| |||||||| | || |||| | ||| || |||||||| || || || || || Sbjct 92870 GACATGTGCGATCATATGGGTTAGCAAGGAGTAGCTTGCAATGTTAAAAGGTACACCCAA 92811 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735 || | || | ||||| ||||| | |||||| ||||||||||||| || || | || Sbjct 92810 ACCGACATCGGCTGATCGCTGATACATCTGGCAAGACAGCTCCCCATCAGCAACAAAAAA 92751 Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGC 6795 ||| | ||| || || || || ||||| || | || || ||||| || Sbjct 92750 TTGTGCCAAACAGTGACAAGGCGGTAGGGCCATATTGGGAATGTCGGAAGGATTCCAAGC 92691 Query 6796 GCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTG-CA 6854 || ||| | ||| | | |||| ||| || || | ||| ||||| | ||| || Sbjct 92690 GCTCATGATGATTCGACGATCATAAGGATTGTTTTTTATTTTGTGAATCAC-TTCTGCCA 92632 Query 6855 GCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAGT 6914 |||||| ||||||||| | || || | | || |||| || ||||| | Sbjct 92631 ACTGGTCGATTCCCTGTCCTGTGTAATCGTCGTGGCATGTTTTGTACTTTGCGCCAAAAT 92572 Query 6915 GTCTCCACTGGAACCCGTAGACCGGGCC 6942 | | |||||| || ||||| || ||||| Sbjct 92571 GGCGCCACTGAAAGCCGTAAACTGGGCC 92544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448171839788640