Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20culicifacies_20[genbank_20GCA_5F000473375.1_202013-09- 30] 16,162 sequences; 202,998,806 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq5733 100 2e-16 >seq5733 Length=11217 Score = 100 bits (110), Expect = 2e-16 Identities = 181/265 (68%), Gaps = 0/265 (0%) Strand=Plus/Plus Query 4816 GAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCT 4875 |||| || ||||| ||||| || ||||| || || | |||||| || || || | Sbjct 2706 GAATGTACGTGTCGATTAGCAGCGAGTACATCTCGCTGTGCACATTTTCCATCGCTATTT 2765 Query 4876 GAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTA 4935 |||| ||||||||||| | ||||| ||||| || || || | || || | ||| || | Sbjct 2766 GAAAGCCGTAAAAGCAGCGTGCTTCCGTTACCTGTACCTCCTGACTGAAGCGTTCCACCA 2825 Query 4936 AGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGT 4995 ||| ||||| || ||||| || || ||||| || || | || || || || || | Sbjct 2826 GGTTCTCGTTAACGATACCATCGGATGCGGCAAAGAAGGCAAGCACGTGCGAGATGAAAT 2885 Query 4996 ACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTT 5055 ||||| || || || || ||||| || || || | || ||| || |||| Sbjct 2886 GACGTTCGCTCGGTTTCAGCGATTCCCAGTCTTTCATGTCCTTCGATAGATCGACCTCTT 2945 Query 5056 CAACAGTCCAAAACGACGCTTCCGC 5080 | || ||||| || || |||||||| Sbjct 2946 CCACGGTCCAGAAGGAAGCTTCCGC 2970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426965482171946