Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20culicifacies_20[genbank_20GCA_5F000473375.1_202013-09- 30] 16,162 sequences; 202,998,806 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq2 470 2e-127 >seq2 Length=295332 Score = 470 bits (520), Expect = 2e-127 Identities = 1222/1849 (66%), Gaps = 22/1849 (1%) Strand=Plus/Minus Query 75398 GCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 75457 || || || || || | ||| ||||| || || || | |||| |||| ||||||||| Sbjct 212053 GCCGGCTTGGTGCGCAAATAATACATGCCCGTCTTCAATCCCATCTTCCAGCCGTAGAAA 211994 Query 75458 TGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTT 75517 || || || || ||| ||| |||| ||||||| || || || | ||| || | Sbjct 211993 TGGATCGACGTGAGCTTGCCATAGTTCGGCTCGGCTACGTGTATGTTGAACGATTGTGAT 211934 Query 75518 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCC 75577 ||||| ||||| || |||| ||| || |||||||| || || ||| | |||||| Sbjct 211933 TGATCAATGAATGCACCTCGATCGGCAGCCATTTTAATGCATGTTTTTACCGAGATTTCC 211874 Query 75578 CAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGA-TTTGTAT--TTTGAATGGAT 75634 || | |||||| | | | ||| || | ||||| ||| ||| |||| |||||| Sbjct 211873 CACACTGTTTTGTACAGGTCACGGATCTCTTTTGGAATTGTTTCTATGCTTTGGATGGAT 211814 Query 75635 CCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAA 75694 || || || | || | ||||| || || || ||||| || | || | | Sbjct 211813 CCATTATTGGACAAGATGTTGTTCTTCATATCGAGATCCCACAGCCCCATCGCAGTCAGA 211754 Query 75695 ACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAA 75754 || ||||||||| | || || | || || || || ||||| || | |||| | ||| Sbjct 211753 TCTTGCAGGAGATGATGGTTCACCACCTGGAACTCGCCCGACAACACACGTCGATTATAA 211694 Query 75755 ATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCA 75814 | || || || || || | ||| |||||||| ||||| ||||| || |||||||| Sbjct 211693 ACGTTCGATGTGTACGGCTCGAAAGACTCATTGTTGCCCAATATTTGCGCCGTTGAAGCG 211634 Query 75815 GTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTT 75874 |||||||| || |||| | ||| ||| | | || || || || || |||||| Sbjct 211633 GTCGGCATCGGAGCCAAAAGTAATGAATTACGAATTCCGTGCTTTGCTATCTTTTCTTTT 211574 Query 75875 AGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATT 75934 | | ||| | ||| ||||| | ||| | | ||| | ||||| |||| | Sbjct 211573 AACTCGGCCCAGTTCCATAGATCCGTCGGTTCCTTGTTCCACATTTCGTACTGTAATACG 211514 Query 75935 CCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCG 75994 || ||||| | ||| | ||| || ||||| | |||||| ||| |||| ||| Sbjct 211513 CCTTTGCTTACCGGACTTCCTTCATACGTCTCGTACGGACCGTCCCGTTCGGCTAACTCG 211454 Query 75995 CAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGC 76054 |||||||| || | |||||| || ||||| ||||| || || | | ||| || | ||| Sbjct 211453 CAACTCGCTTCCAGCGCACCATAGTAAATGGTTTCAAATATTTGTTGATTCAGCTTTTGG 211394 Query 76055 GCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACT 76114 || || || || | ||||| | | | ||| |||||||| || | || || || Sbjct 211393 GCCTCTTCGCTTTCGTACGGATAGCGCATTAAAATGAATGCATCGGCCATACCTTGCACA 211334 Query 76115 CCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAA 76174 || || ||||| || || || | | | || || | || || || | || || || Sbjct 211333 CCGATTCCAATGGGCCTGTGGCGCATGTTAGAGCGCTTCGCCTCCGGTACTGGATAGTAG 211274 Query 76175 TTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTG 76234 || ||||| || ||||| || ||||| | || | ||| | || ||||| || || Sbjct 211273 TTGATATCGATTATTTTGTTCAGATTGCGCGTCACAATCTTAGCGACTTCCTTAAGCTTT 211214 Query 76235 AGAAAATCAAA----TTTTCCATCTATCACAAACATATTAAGAGCTATAGATGCTAGATT 76290 | |||||| | || || ||| | || ||||| || || || || || || ||||| Sbjct 211213 ACAAAATCGTAAGTCTTGTCTGTCTTT-ACGAACATGTTTAGGGCGATCGAAGCCAGATT 211155 Query 76291 ACAAACGGCTA---CCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACT 76347 ||| || || | | || || | || | || | || ||||| ||||| | ||| Sbjct 211154 ACACACTGCAATTTCGTCTTTCG-ATGAG--TACTCTACAATCTCTGTGCACAAGTTAGA 211098 Query 76348 ACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAG 76407 ||||| || || |||| ||| ||||| ||||| || || |||| ||||| || || Sbjct 211097 GCACTTTATGGTGCCAACATTCTGTTGATTGCTTTTACGATTGCATGCATCCTTGTACAG 211038 Query 76408 AACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGC 76467 | | |||| || ||||| | ||| ||||| || || | | ||| | | || Sbjct 211037 CATATACGGTACGCCCGTTTCCACCTGCGATTCAATGATTGCATACCACAAATCCTGTGC 210978 Query 76468 TTTTA-TTATAGATTTGTATCGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATT 76526 ||| || | || | | |||| ||| | || || | || || | || || | Sbjct 210977 CCTTACTTGTCGAAT-GAATCGTCCCTCCTTCTCGTAACGCGTGTACAGTGTCTCGAACT 210919 Query 76527 CATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCAC 76586 | || |||||| || |||| |||||||| || | || ||||||| |||| Sbjct 210918 CTTCACCCCAAGTTTCCGCCAACCCAGGACAATCGTGAGGGCACATCAGACTCCACATTT 210859 Query 76587 CATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTC 76646 | | ||| |||||||||||||| ||||| |||||||| | ||| || | | || || Sbjct 210858 CGTTAGCCTCTACCCGTTTCATAAACAGATCCGGTATCCACAAAGCG-TAGA-ACATGTC 210801 Query 76647 GGGTTCTACGT---TCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATAT 76703 || | ||| || || || || || || || || ||||| || ||||| | | || Sbjct 210800 ACGTGC-ACGCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCGAATACAT 210742 Query 76704 CAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGAT 76763 || |||||||||||| || ||||| || | | | ||||||||||| || || ||||||| Sbjct 210741 CACCATGCCATGGTTCGAGGTATATGGCAAAAGCTCCCGGTCGTTTGTTGCCACCCTGAT 210682 Query 76764 CTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTAC 76823 | | ||||| ||| ||||| || || |||| || ||| || | | ||||| || | | Sbjct 210681 CCACATATCGGGCTGTGTTGTTGTACACTCGCAGCATCGGTACCAACCCGTTCGAAATCC 210622 Query 76824 CATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTC 76883 | || || || || || || |||| || |||||| || | || || |||| Sbjct 210621 CGTTCGTGCCTGAGATGTACGTTCCCTTCGCGCGAATACAGTGAACATTCAGCCCAATTC 210562 Query 76884 CTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATAC 76943 | ||||| ||| || || || ||||| | || | || |||||||| || || |||| Sbjct 210561 CGCCTGCTGATTTTGAAATCAGCGCACACTGCTTTAGCGTATCATAGATACCTTCAATAC 210502 Query 76944 TATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCAT 77003 |||| || |||| | || |||||||| |||| || || | || |||| Sbjct 210501 TATCGTCAGACATGGTTAGCAGAAAACAAGATGACAGCTGTGGACGTTGCGTAGCTGCCG 210442 Query 77004 TAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAA 77063 ||||| || || || ||||| || || | || ||||| | |||||||| || | Sbjct 210441 CAAACATGGTCGGTGAGGCATGGGTAAAATAACGCTCCGAAAGCAAGTTGTATGTCTCGA 210382 Query 77064 TAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAG 77123 | |||| || || || ||| || || | || || ||||||||||| ||||| | Sbjct 210381 TGGCTGCATCGATGTCTTCACCATGTATACCGATCGCAACGCGCATCAACATGTGCTGCG 210322 Query 77124 GTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAAC 77183 | ||||| ||| ||||| || || |||||||| || || |||||| ||||| || | Sbjct 210321 GACGTTCAACAATCTTACCCTTGATCTTCAACAAATAGGACCGTTCCAATGTTTTGAACC 210262 Query 77184 CAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAG 77232 |||| ||||||||| ||| || | |||||||| || ||||||| || Sbjct 210261 CAAAGTAGTTGTATCCAAAATCGCGATCGTAAATGATGGCCGAATTCAG 210213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712790369427840