Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20culicifacies_20[genbank_20GCA_5F000473375.1_202013-09- 30] 16,162 sequences; 202,998,806 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq78 87.8 7e-13 >seq78 Length=100849 Score = 87.8 bits (96), Expect = 7e-13 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 52140 CAATTCTATGTAGCTGAAGGTAAGCTTTCGTGCCATTTGTATCAGCGGTCTGCCGACATG 52199 ||||| | ||| ||||| || |||| || ||||| |||||||||| || ||||| | Sbjct 92748 CAATTTTTTGTTGCTGATGGGGAGCTGTCTTGCCAGATGTATCAGCGATCAGCCGATGTC 92807 Query 52200 TTCTTGGGCGTTCCGTTTAACATTGCCAGCTATTCCTTGCTGACGCATCTGATTGC 52255 ||||| || || ||||||||||| ||||| |||||||| || ||| |||| || Sbjct 92808 GGTTTGGGTGTACCTTTTAACATTGCAAGCTACTCCTTGCTAACCCATATGATCGC 92863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190059516062820