Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20culicifacies_20[genbank_20GCA_5F000473375.1_202013-09- 30] 16,162 sequences; 202,998,806 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq3723 111 4e-19 seq48 93.3 1e-13 >seq3723 Length=15797 Score = 111 bits (122), Expect = 4e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||||| || || ||||| || ||||| || || || |||||||| || | || || | Sbjct 4023 GAGTCGCAGCACCAGATGGAGGGTAGATTCCTTCTGAATGTTGTAGTCCGATAGTGTGCG 4082 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || ||||||||||| || | |||||| || | | |||||| || Sbjct 4083 GCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCTGGGGGGATTCCCTC 4142 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || ||| || ||| | || | |||| || ||| || ||||| || Sbjct 4143 CTTGTCCTGGATCTTTGCCTTCACATTTTCGATCGTGTCCGATGGCTCGACCTCAAGTGT 4202 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| || |||||||| | |||||| Sbjct 4203 GATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 4241 >seq48 Length=116589 Score = 93.3 bits (102), Expect = 1e-13 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| | || | || ||||| || ||||||||||| |||| | ||| | || || Sbjct 116542 GAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTC 116483 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || || ||||||||||| | | |||||| || | | || || ||||| || Sbjct 116482 TTCCAGCTGCTTACCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTC 116423 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || || || |||| | |||| || ||| || || || || || || Sbjct 116422 CTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGATGGCTCGACCTCCAGCGTGATGGT 116363 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||| || || ||||||||||||| ||||||| Sbjct 116362 CTTGCCAGTCAGCGTCTTCACGAAGATCTGCATT 116329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153581871836702