Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq372 93.3 9e-14 seq1831 91.5 3e-13 seq1242 91.5 3e-13 seq865 91.5 3e-13 seq797 91.5 3e-13 seq1615 89.7 1e-12 seq561 89.7 1e-12 seq89 89.7 1e-12 seq87 89.7 1e-12 seq76 89.7 1e-12 seq53 89.7 1e-12 seq1567 86.0 1e-11 >seq372 Length=50997 Score = 93.3 bits (102), Expect = 9e-14 Identities = 251/382 (66%), Gaps = 4/382 (1%) Strand=Plus/Plus Query 61089 CAAGCATCAACATCTGAACTGTATGGAAAAGT--TCAAGAAATTCCTCAAACAGAAAGGA 61146 |||||||| || || || ||||| || ||||| || ||| | || || ||||| | Sbjct 39731 CAAGCATCCACCTCCGAGCTGTACGGCAAAGTGGTCGAGACACCCCAGAACGAGAAA--A 39788 Query 61147 CTCCGTTTTATCCTCGTAGCCCGTATGGTGTTGCAAAACTATACGCTTACTGGATTTGTA 61206 |||| || ||||| || ||||||| ||| || | |||| |||||||| | Sbjct 39789 CTCCCTTCTATCCCCGCTCGCCGTATGCATGTGCCAAGATGTACGGATACTGGATCGTGA 39848 Query 61207 AAAATTACCGCGAGTCGTATGGAATGTTTGTATGTAACTCGATTTGTTTCAATCACGAGA 61266 |||||||||||| |||| | ||||||| || ||| |||| ||||| || || Sbjct 39849 TCAATTACCGCGAGGCGTACGATATGTTTGCCTGCAACGGGATTCTGTTCAACCATGAAT 39908 Query 61267 GTCCCAATAGAGGTCATCAGTTTGTGACTCGTAAAATTACGAAGGCGGTTGCAAATATTT 61326 ||| | || | | |||||||| ||||| || || |||| || || || | Sbjct 39909 CGCCCCGACGCGGAGAGAATTTTGTGACCCGTAAGATCACTCGTTCGGTCGCGAAGATAT 39968 Query 61327 TTAACGGTGTCGAAAAATGCATGTATCTAGGAAACATAGACTCTAAAAGAGATTGGGGAT 61386 ||| | ||||| | | || || || | || || || |||| ||||| Sbjct 39969 CGCTCGGGCAGCAGGAATGCGTCGAGCTGGGTAATCTCGATTCCAAGCGAGACTGGGGTC 40028 Query 61387 ATGCGGAAGATTATATCGAGGCTATGTGGTTGATGTTGCAACAAGATACTCCAGATGACT 61446 | ||| | || ||| | ||||| |||||| ||||| |||| || || | || || |||| Sbjct 40029 ACGCGAAGGACTATGTGGAGGCGATGTGGCTGATGATGCAGCAGGAGAAACCGGAAGACT 40088 Query 61447 ACGTTATTGCGACTGGACAGAC 61468 || ||||| || || |||| Sbjct 40089 TTGTCATTGCCACCGGCGAGAC 40110 >seq1831 Length=73062 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 35611 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 35552 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 35551 CCCCACGTTGGGC 35539 >seq1242 Length=1720 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 1380 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1321 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 1320 CCCCACGTTGGGC 1308 >seq865 Length=339490 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 165707 CTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCG 165766 || ||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct 246762 CTGGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 246821 Query 165767 AGCCCCACGATGGGC 165781 ||||||||| ||||| Sbjct 246822 AGCCCCACGTTGGGC 246836 >seq797 Length=26409 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 3320 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 3379 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 3380 CCCCACGTTGGGC 3392 >seq1615 Length=55738 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 43850 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 43791 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 43790 CCCACGTTGGGC 43779 >seq561 Length=41888 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 7169 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 7110 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 7109 CCCACGTTGGGC 7098 >seq89 Length=236950 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 67106 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 67047 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 67046 CCCACGTTGGGC 67035 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 90784 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 90843 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 90844 CCCACGTTGGGC 90855 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 91400 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 91459 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 91460 CCCACGTTGGGC 91471 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 103630 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 103571 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 103570 CCCACGTTGGGC 103559 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 106622 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 106681 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 106682 CCCACGTTGGGC 106693 >seq87 Length=924360 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 502456 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 502397 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 502396 CCCACGTTGGGC 502385 >seq76 Length=30173 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 18335 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 18276 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 18275 CCCACGTTGGGC 18264 >seq53 Length=245784 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 94542 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 94483 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 94482 CCCACGTTGGGC 94471 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 94994 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 95053 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 95054 CCCACGTTGGGC 95065 >seq1567 Length=65240 Score = 86.0 bits (94), Expect = 1e-11 Identities = 248/380 (65%), Gaps = 10/380 (3%) Strand=Plus/Minus Query 281571 GGAATGTTAGTAGACCAACCGGTTCCAATACCACTTGAACCATTTACCAAAATACTCGGG 281630 ||||| || || ||||| || || || ||||| | ||| || |||| | |||| Sbjct 48652 GGAATTTTCGTTGACCAGCCCGTGCCGATACCTTCGGCACCGTTCACCAGCAACATCGGA 48593 Query 281631 ATAATAGGTACATAACATTCTGGTTCAATTTTATCACCATCATCATACAAATACTTCAGA 281690 || || || | ||| ||| | || ||||| | | || || ||| ||||| || Sbjct 48592 ATGATCGGCAGATACCATACCGGCTCAATACGCTGATTGTCCTCGTACTGATACTCGAGC 48533 Query 281691 AGGTTATCATCT---GTATCGACGAAAACCTGTCGCGTCTTAGGGTT--CAGTTTCGTGA 281745 || ||| || | || || || || |||| | | |||| ||| | || | Sbjct 48532 AGTGGATCGTCGAGCGGATGGAAGA-----TGAGGCGTGTCAAGGTTGACAGCATGGTAA 48478 Query 281746 AGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCCAAACTGACCCT 281805 |||| || | | ||| ||| ||| || |||||| || || || ||||||||||| Sbjct 48477 AGATGTAACGCGGACTAGCGCTGTCCTTGCCACCCGTCAACCGCGTACCAAACTGACCGC 48418 Query 281806 CCGGCAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGGTTGACGATTG 281865 |||| ||| | ||||||||| ||||| ||||| | | ||| ||||| |||| ||| | Sbjct 48417 CCGGGTACAGCAGGTTAATGTTGTTGCTGCCGACAAAGTTCTGGGCCAGATTGATGATAG 48358 Query 281866 TCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACATAACCACTGA 281925 | | ||||| || ||||||||||| ||| ||| || || |||| | Sbjct 48357 TGCTGCACAGCGACTGTTCGCCGTGGTGATAAGCGGACATTTCCGCCACCGAACCGGCCA 48298 Query 281926 ACTGTGCTACCTTCACGTCT 281945 ||| || |||||||| ||| Sbjct 48297 GCTGGGCCACCTTCACCTCT 48278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057793911518600