Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq14 113 5e-20
>seq14
Length=264275
Score = 113 bits (124), Expect = 5e-20
Identities = 272/409 (67%), Gaps = 2/409 (0%)
Strand=Plus/Plus
Query 16798 ATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTAC 16857
|||||| || || || || || || |||| | ||||| ||||| || | | | ||
Sbjct 132131 ATCCGCCACGAACTCGATGTACTGCGACATGAGCTCGCAATTCATACCCAACATATCGAC 132190
Query 16858 CGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGC 16917
|| || |||| ||||| || ||||| || | || || || || ||| |
Sbjct 132191 AGGCAGTGCTTTCGTCAGGAACTCCTGCTCGATCATGACTGCATCACGGATGATATCCGT 132250
Query 16918 AACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCA 16977
|| |||| || ||| | ||| |||| || ||||| ||||| || || |||||
Sbjct 132251 TACGCGTTTGCGCGATGGTTTCTGTACCAGATACTTGAACATGAGACAGGCAAAGTCGCA 132310
Query 16978 ATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCC 17037
|||||| || || || | ||| || ||||| || || |||| || |||||| ||
Sbjct 132311 ATGTAAACCTTCATCGCGCGAGATCAGCTCGTTGGAGAACGTCAGACCCGGCATCAGGCC 132370
Query 17038 TCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGA 17097
|| ||||||| ||| || || || || || ||| ||||| |||||||||||||
Sbjct 132371 ACGCTTCTTTAGCCAGAAGATGGCAGCAAAGCTGCCACTGAAGAAGATACCCTCGACGGC 132430
Query 17098 TGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA-ATCCATTTCTGCA 17156
||| ||||| | | || ||| |||| | || | ||| | ||| ||||| ||| |
Sbjct 132431 TGCGAACGCCACGATACGCTCGCCGTAGTTAGCCTTCTTGCT-CGAGATCCAGTTCATCG 132489
Query 17157 CCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA 17205
|||| || || || |||| | ||| || ||| || ||||| || ||
Sbjct 132490 CCCAGTCCGCCTTACGCTTCACGCACGGCAGCGTCTCGATGGCATTGAA 132538
Score = 91.5 bits (100), Expect = 2e-13
Identities = 179/265 (68%), Gaps = 0/265 (0%)
Strand=Plus/Plus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
|| || || ||||| || || |||||||||| ||||| ||| ||||| || |||||
Sbjct 132639 ATGTAGGTGTCGATAAGAAGCGAGTACATTTCGCTGTGTACGTTTTCCATCGCGATCTGG 132698
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353
|| || || || || ||||| |||| | || || ||| | ||| ||||| | |||
Sbjct 132699 AAACCATAGAAACAGCGGGCCTCCGTCACCTGTACCTCCTGGCTGAACCGTTCAACCAGA 132758
Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413
||||||||||| || || || || ||||| || || | | ||| |||||||
Sbjct 132759 TTTTCGTTCACAATACCATCCGAGGCAGCGAAGAAGGCGAGCACGTGCGAGATGAAATGA 132818
Query 17414 TTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCG 17473
||| |||| | || |||||| || | || || || | |||||| ||||||
Sbjct 132819 CGTTCACTCGGTTTCAGTGAATCCCAGTCTTTCATGTCCTTTGAGAGATCCACCTCTTCG 132878
Query 17474 GGGGTCCAAAAACTAGCCACTGCCT 17498
||||| ||| ||| | ||||
Sbjct 132879 ACCGTCCAGAAAGAAGCTTCGGCCT 132903
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517531238109600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |