Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq14 113 5e-20 >seq14 Length=264275 Score = 113 bits (124), Expect = 5e-20 Identities = 272/409 (67%), Gaps = 2/409 (0%) Strand=Plus/Plus Query 16798 ATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTAC 16857 |||||| || || || || || || |||| | ||||| ||||| || | | | || Sbjct 132131 ATCCGCCACGAACTCGATGTACTGCGACATGAGCTCGCAATTCATACCCAACATATCGAC 132190 Query 16858 CGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGC 16917 || || |||| ||||| || ||||| || | || || || || ||| | Sbjct 132191 AGGCAGTGCTTTCGTCAGGAACTCCTGCTCGATCATGACTGCATCACGGATGATATCCGT 132250 Query 16918 AACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCA 16977 || |||| || ||| | ||| |||| || ||||| ||||| || || ||||| Sbjct 132251 TACGCGTTTGCGCGATGGTTTCTGTACCAGATACTTGAACATGAGACAGGCAAAGTCGCA 132310 Query 16978 ATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCC 17037 |||||| || || || | ||| || ||||| || || |||| || |||||| || Sbjct 132311 ATGTAAACCTTCATCGCGCGAGATCAGCTCGTTGGAGAACGTCAGACCCGGCATCAGGCC 132370 Query 17038 TCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGA 17097 || ||||||| ||| || || || || || ||| ||||| ||||||||||||| Sbjct 132371 ACGCTTCTTTAGCCAGAAGATGGCAGCAAAGCTGCCACTGAAGAAGATACCCTCGACGGC 132430 Query 17098 TGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA-ATCCATTTCTGCA 17156 ||| ||||| | | || ||| |||| | || | ||| | ||| ||||| ||| | Sbjct 132431 TGCGAACGCCACGATACGCTCGCCGTAGTTAGCCTTCTTGCT-CGAGATCCAGTTCATCG 132489 Query 17157 CCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA 17205 |||| || || || |||| | ||| || ||| || ||||| || || Sbjct 132490 CCCAGTCCGCCTTACGCTTCACGCACGGCAGCGTCTCGATGGCATTGAA 132538 Score = 91.5 bits (100), Expect = 2e-13 Identities = 179/265 (68%), Gaps = 0/265 (0%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || || ||||| || || |||||||||| ||||| ||| ||||| || ||||| Sbjct 132639 ATGTAGGTGTCGATAAGAAGCGAGTACATTTCGCTGTGTACGTTTTCCATCGCGATCTGG 132698 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || || || || || ||||| |||| | || || ||| | ||| ||||| | ||| Sbjct 132699 AAACCATAGAAACAGCGGGCCTCCGTCACCTGTACCTCCTGGCTGAACCGTTCAACCAGA 132758 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 ||||||||||| || || || || ||||| || || | | ||| ||||||| Sbjct 132759 TTTTCGTTCACAATACCATCCGAGGCAGCGAAGAAGGCGAGCACGTGCGAGATGAAATGA 132818 Query 17414 TTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCG 17473 ||| |||| | || |||||| || | || || || | |||||| |||||| Sbjct 132819 CGTTCACTCGGTTTCAGTGAATCCCAGTCTTTCATGTCCTTTGAGAGATCCACCTCTTCG 132878 Query 17474 GGGGTCCAAAAACTAGCCACTGCCT 17498 ||||| ||| ||| | |||| Sbjct 132879 ACCGTCCAGAAAGAAGCTTCGGCCT 132903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517531238109600