Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq56 114 1e-20
seq14 96.9 4e-15
>seq56
Length=464437
Score = 114 bits (126), Expect = 1e-20
Identities = 191/271 (70%), Gaps = 4/271 (1%)
Strand=Plus/Minus
Query 118936 TTCATGTATCGTATCTTTCCAAATACGGTACGCTCCTTCCATGCTCTG-TCGTGGAGTCC 118994
|||||||| || ||||| ||||| | |||||| ||||| | ||| || |||| ||
Sbjct 139837 TTCATGTAGCGGATCTTGCCAAAAATCTCACGCTCTTTCCAACC-CTGATCATGGATGCC 139779
Query 118995 TGCTACTGCCCATAGACATCCCACGTATCCGTTGGGATCTGTTCCGTCTAACTCGTACTT 119054
|| | | ||| | || || ||||||||||| ||||| || || || | | |
Sbjct 139778 AGCGATCGACCACATGCAACCGACGTATCCGTTCGGATCGCGCCCATCCAAGTTGAAGCG 139719
Query 119055 ATCGTTTAAGTAGATA-CAGACGCTTAACGCACTTTCCGGAGTCTTACTCCATTCCAGTA 119113
|||||| | ||||||| ||| | | | ||| ||| || | ||| |||| || || |
Sbjct 139718 ATCGTTGAGGTAGATAGCAGTCTCG-AGCGCCTCTTCGGGTGATTTAGTCCACTCGAGGA 139660
Query 119114 tttttttAGCCCAGTACATACGTAAATACCCGTGCATTTTACCCTCGTTAATCATCTGAA 119173
| || || ||||||||||| || ||| |||||||||| || || || || | |||||| |
Sbjct 139659 TCTTCTTGGCCCAGTACATGCGCAAAAACCCGTGCATCTTGCCTTCCTTCACCATCTGCA 139600
Query 119174 GTTGTGCGGTGTTCCATAGAGGATCGTGTGT 119204
|| || | |||||| ||| |||||| ||
Sbjct 139599 ACTGGGCCGAGTTCCACAGATCATCGTGGGT 139569
>seq14
Length=264275
Score = 96.9 bits (106), Expect = 4e-15
Identities = 274/414 (66%), Gaps = 8/414 (2%)
Strand=Plus/Plus
Query 16036 ATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAG-TCGTA 16094
||| || || || || || || || |||| | |||||||| || || | | ||| |
Sbjct 132131 ATCCGCCACGAACTCGATGTACTGCGACATGAGCTCGCAATTCATACCCAACATATCG-A 132189
Query 16095 CCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATCGG 16154
| || || ||||| || | || | || || |||| || || || |||||||| |
Sbjct 132190 CAGGCAGTGCTTTCGTCAGGAACTCCTGCTCGATCATGACTGCATCACGGATGATATCCG 132249
Query 16155 TGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGTCGC 16214
| | ||| | || ||| | || || | || ||||| ||||| || |||||||
Sbjct 132250 TTACGCGTTTGCGCGATGGTTTCTGTACCAGATACTTGAACATGAGACAGGCAAAGTCGC 132309
Query 16215 AATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTC 16274
|||||| ||||| || | ||| || |||||||| || || | || ||||| |
Sbjct 132310 AATGTAAACCTTCATCGCGCGAGATCAGCTCGTTGGAGAACGTCAGACCCGGCATCAGGC 132369
Query 16275 CTCGTTTCTTTAACCAGAATATCGCAGCAAA--TGACCCCGAAAAGAATATACCCTCAAC 16332
| || ||||||| |||||| || |||||||| || | | | ||||| |||||||| ||
Sbjct 132370 CACGCTTCTTTAGCCAGAAGATGGCAGCAAAGCTGCCACTG--AAGAAGATACCCTCGAC 132427
Query 16333 AGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGA-ATCCATTTCT 16391
| ||| || || | | || || |||| |||| | || | ||| ||||| |||
Sbjct 132428 GGCTGCGAACGCCACGATACGCTCGCCGTAGTTAGCCTTCTTGCT-CGAGATCCAGTTCA 132486
Query 16392 GTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACA 16445
|||| || || || | || | || || ||| || ||||| || ||||
Sbjct 132487 TCGCCCAGTCCGCCTTACGCTTCACGCACGGCAGCGTCTCGATGGCATTGAACA 132540
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511400208250400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |