Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq56 114 1e-20 seq14 96.9 4e-15 >seq56 Length=464437 Score = 114 bits (126), Expect = 1e-20 Identities = 191/271 (70%), Gaps = 4/271 (1%) Strand=Plus/Minus Query 118936 TTCATGTATCGTATCTTTCCAAATACGGTACGCTCCTTCCATGCTCTG-TCGTGGAGTCC 118994 |||||||| || ||||| ||||| | |||||| ||||| | ||| || |||| || Sbjct 139837 TTCATGTAGCGGATCTTGCCAAAAATCTCACGCTCTTTCCAACC-CTGATCATGGATGCC 139779 Query 118995 TGCTACTGCCCATAGACATCCCACGTATCCGTTGGGATCTGTTCCGTCTAACTCGTACTT 119054 || | | ||| | || || ||||||||||| ||||| || || || | | | Sbjct 139778 AGCGATCGACCACATGCAACCGACGTATCCGTTCGGATCGCGCCCATCCAAGTTGAAGCG 139719 Query 119055 ATCGTTTAAGTAGATA-CAGACGCTTAACGCACTTTCCGGAGTCTTACTCCATTCCAGTA 119113 |||||| | ||||||| ||| | | | ||| ||| || | ||| |||| || || | Sbjct 139718 ATCGTTGAGGTAGATAGCAGTCTCG-AGCGCCTCTTCGGGTGATTTAGTCCACTCGAGGA 139660 Query 119114 tttttttAGCCCAGTACATACGTAAATACCCGTGCATTTTACCCTCGTTAATCATCTGAA 119173 | || || ||||||||||| || ||| |||||||||| || || || || | |||||| | Sbjct 139659 TCTTCTTGGCCCAGTACATGCGCAAAAACCCGTGCATCTTGCCTTCCTTCACCATCTGCA 139600 Query 119174 GTTGTGCGGTGTTCCATAGAGGATCGTGTGT 119204 || || | |||||| ||| |||||| || Sbjct 139599 ACTGGGCCGAGTTCCACAGATCATCGTGGGT 139569 >seq14 Length=264275 Score = 96.9 bits (106), Expect = 4e-15 Identities = 274/414 (66%), Gaps = 8/414 (2%) Strand=Plus/Plus Query 16036 ATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAG-TCGTA 16094 ||| || || || || || || || |||| | |||||||| || || | | ||| | Sbjct 132131 ATCCGCCACGAACTCGATGTACTGCGACATGAGCTCGCAATTCATACCCAACATATCG-A 132189 Query 16095 CCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATCGG 16154 | || || ||||| || | || | || || |||| || || || |||||||| | Sbjct 132190 CAGGCAGTGCTTTCGTCAGGAACTCCTGCTCGATCATGACTGCATCACGGATGATATCCG 132249 Query 16155 TGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGTCGC 16214 | | ||| | || ||| | || || | || ||||| ||||| || ||||||| Sbjct 132250 TTACGCGTTTGCGCGATGGTTTCTGTACCAGATACTTGAACATGAGACAGGCAAAGTCGC 132309 Query 16215 AATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTC 16274 |||||| ||||| || | ||| || |||||||| || || | || ||||| | Sbjct 132310 AATGTAAACCTTCATCGCGCGAGATCAGCTCGTTGGAGAACGTCAGACCCGGCATCAGGC 132369 Query 16275 CTCGTTTCTTTAACCAGAATATCGCAGCAAA--TGACCCCGAAAAGAATATACCCTCAAC 16332 | || ||||||| |||||| || |||||||| || | | | ||||| |||||||| || Sbjct 132370 CACGCTTCTTTAGCCAGAAGATGGCAGCAAAGCTGCCACTG--AAGAAGATACCCTCGAC 132427 Query 16333 AGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGA-ATCCATTTCT 16391 | ||| || || | | || || |||| |||| | || | ||| ||||| ||| Sbjct 132428 GGCTGCGAACGCCACGATACGCTCGCCGTAGTTAGCCTTCTTGCT-CGAGATCCAGTTCA 132486 Query 16392 GTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACA 16445 |||| || || || | || | || || ||| || ||||| || |||| Sbjct 132487 TCGCCCAGTCCGCCTTACGCTTCACGCACGGCAGCGTCTCGATGGCATTGAACA 132540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511400208250400