Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq14 264 1e-65
seq673 163 3e-35
seq610 113 5e-20
seq122 113 5e-20
seq966 109 6e-19
>seq14
Length=264275
Score = 264 bits (292), Expect = 1e-65
Identities = 318/430 (74%), Gaps = 2/430 (0%)
Strand=Plus/Minus
Query 116946 TGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCT 117005
|||| || |||||||||||| |||||||||| || ||||| || |||||| || ||
Sbjct 132540 TGTTCAATGCCATCGAGACGCTGCCGTGCGTGAAGCGTAAGGCGGACTGGGCGATGAACT 132481
Query 117006 GGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGG 117065
||||| | ||| |||| || ||||||||| | ||||| ||||| ||||||||||
Sbjct 132480 GGATCTCGAGCAAGAAGGCTAACTACGGCGAGCGTATCGTGGCGTTCGCAGCCGTCGAGG 132421
Query 117066 GCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGC 117125
| ||||||| ||||| || || ||||| || ||||| ||||| || ||||| ||||
Sbjct 132420 GTATCTTCTTCAGTGGCAGCTTTGCTGCCATCTTCTGGCTAAAGAAGCGTGGCCTGATGC 132361
Query 117126 CCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTG 117185
| || ||||| ||| ||||||||| ||||| | || || ||| | |||||||||||||
Sbjct 132360 CGGGTCTGACGTTCTCCAACGAGCTGATCTCGCGCGATGAAGGTTTACATTGCGACTTTG 132301
Query 117186 CCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCG-GCGCGCGTCAGGGAGATC 117244
||||| | |||||||| || |||| ||| ||| | |||| ||||| | ||| |||
Sbjct 132300 CCTGTCTCATGTTCAAGTATCTGGTACAGAAACC-ATCGCGCAAACGCGTAACGGATATC 132242
Query 117245 GTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTG 117304
|| || || ||| ||||||||| ||||| || |||| ||||| || | ||
Sbjct 132241 ATCCGTGATGCAGTCATGATCGAGCAGGAGTTCCTGACGAAAGCACTGCCTGTCGATATG 132182
Query 117305 CTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTG 117364
|||| | |||||||| |||||||| |||||||||||||| || || | ||| ||
Sbjct 132181 TTGGGTATGAATTGCGAGCTCATGTCGCAGTACATCGAGTTCGTGGCGGATCGTCTGTTG 132122
Query 117365 CTCGAGCTGG 117374
| ||| |||
Sbjct 132121 GTGGAGTTGG 132112
>seq673
Length=25255
Score = 163 bits (180), Expect = 3e-35
Identities = 169/219 (77%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|||||||| || ||||| ||||||||||| ||||| |||||||| |||| ||||| |||
Sbjct 24642 AAAATGCAGATTTTCGTGAAAACGCTCACCGGCAAGACCATCACACTCGAGGTCGA-GCC 24584
Query 40747 ACCG-ACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
| || ||| | | | | | |||| || || | ||||| ||||| |||||| | ||
Sbjct 24583 ATCGGACACCATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCCCCAGA 24524
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
||||| || || |||| ||| ||||| |||||||| |||| || ||||| |||||
Sbjct 24523 TCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGTACCCTTTCGGACTA 24464
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
|||||||||||||||| | || |||||||| ||| ||||
Sbjct 24463 CAACATCCAGAAGGAGTCGACCCTGCATCTTGTGCTGCG 24425
>seq610
Length=159711
Score = 113 bits (124), Expect = 5e-20
Identities = 157/215 (73%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| || || || || || || |||||||| | || ||||| |||
Sbjct 159114 AATATGCAGATTTTCGTGAAGACCCTGACAGGAAAGACCATCACTCTGGAGGTCGA-GCC 159172
Query 40747 A-CCGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804
| |||| | | || |||| | |||| || |||| || || || |||||||| | |
Sbjct 159173 ATCCGATACGATTGAGAACG-TGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCCAG 159231
Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864
| ||||| || || |||| ||| || || |||||||| || | || || || |||||
Sbjct 159232 ATCAGCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGTACTCTGTCCGACT 159291
Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|||||||||||||||| | || || ||||| |||
Sbjct 159292 ACAACATCCAGAAGGAATCGACTCTCCATCTGGTG 159326
Score = 113 bits (124), Expect = 5e-20
Identities = 159/218 (73%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA- 40747
|||||| || ||||| || || || || || || |||||||| | || ||||| ||||
Sbjct 159344 AATGCAGATTTTCGTGAAGACCCTGACAGGAAAGACCATCACTCTGGAGGTCGA-GCCAT 159402
Query 40748 CCGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
|||| | | || |||| | |||| || |||| || || || |||||||| | ||
Sbjct 159403 CCGATACGATTGAGAACG-TGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCCAGAT 159461
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| || || |||| ||| || || |||||||| || | || || || |||||||
Sbjct 159462 CAGCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGTACTCTGTCCGACTAC 159521
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
|||||||||||||| | || || ||||| || ||||
Sbjct 159522 AACATCCAGAAGGAATCGACTCTCCATCTGGTACTGCG 159559
>seq122
Length=254344
Score = 113 bits (124), Expect = 5e-20
Identities = 149/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || ||| | || ||||| || ||||| | || || || | |
Sbjct 68678 ATGCAGATCTTCGTGAAGACGTTGACTGGCAAGACGATCACTCTGGAGGTGGAGCCTTCG 68619
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | | |||| |||||| || || | ||||| |||||||| ||| | || ||
Sbjct 68618 GATACCATCGAGAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCA 68560
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || | |||| ||| ||||| |||||||| |||| || ||||| |||||| ||
Sbjct 68559 GCAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAAGACGGACGTACCCTGTCCGACTATAA 68500
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||| | || |||||
Sbjct 68499 CATCCAGAAGGAGTCGACCCTGCA 68476
>seq966
Length=353950
Score = 109 bits (120), Expect = 6e-19
Identities = 155/213 (73%), Gaps = 4/213 (2%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA- 40747
|||||| || ||||| || || || || || || ||||||||| | || ||||| ||||
Sbjct 223 AATGCAGATTTTCGTGAAGACCCTGACAGGAAAGACCATCACCCTGGAGGTCGA-GCCAT 281
Query 40748 CCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
|||| | | | |||| | |||| || |||| || || || ||||| || | ||
Sbjct 282 CCGATACAATTGAGAACG-TGAAGGCTAAGATTCAGGATAAGGAAGGCATTCCTCCAGAT 340
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| || || |||| ||| || || |||||||| || | || || || |||||||
Sbjct 341 CAGCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGTACGCTGTCCGACTAC 400
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|||||||| ||||| | || || |||||||||
Sbjct 401 AACATCCAAAAGGAATCGACTCTCCATCTAGTG 433
Score = 100 bits (110), Expect = 3e-16
Identities = 149/206 (72%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 40696 ATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA-CCGACA- 40753
|| ||||| || || || || || || |||||||| | || ||||| |||| |||| |
Sbjct 2 ATTTTCGTGAAGACCCTGACAGGAAAGACCATCACTCTGGAGGTCGA-GCCATCCGATAC 60
Query 40754 GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAAC 40813
| || |||| | |||| || |||| || || || |||||||| | || ||||| |
Sbjct 61 GATTGAGAACG-TGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCCAGATCAGCAGC 119
Query 40814 GACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCC 40873
| || |||| ||| || || |||||||| || | || || || |||||||||||| |
Sbjct 120 GTCTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGTACTCTGTCCGACTACAACATTC 179
Query 40874 AGAAGGAGGCCACGCTGCATCTAGTG 40899
||||||| | || || ||||| |||
Sbjct 180 AGAAGGAATCGACTCTCCATCTGGTG 205
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515204902667200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |