Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq673 116 3e-21
seq966 114 1e-20
seq610 113 4e-20
seq111 109 5e-19
seq1047 104 2e-17
seq122 98.7 9e-16
>seq673
Length=25255
Score = 116 bits (128), Expect = 3e-21
Identities = 163/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | || || ||| | || | || ||||| || || |||||||| ||
Sbjct 24411 TACCACCACGAAGTCGCAGCACAAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCG 24470
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| || || ||||| ||||| || || ||| |||| |||||||||||||| || |
Sbjct 24471 AAAGGGTACGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGG 24530
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || ||||||||||| || || || || | |||| |||||||| |||||
Sbjct 24531 GGATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATGGTGTCCGATGGCTCGA 24590
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||| || | || |||||||| || ||||| || |||||||||||
Sbjct 24591 CCTCGAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 24639
>seq966
Length=353950
Score = 114 bits (126), Expect = 1e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595
|||| || || || ||||| |||||||| ||| || || || |||||| |||||
Sbjct 426 TGGAGAGTCGATTCCTTTTGGATGTTGTAGTCGGACAGCGTACGACCATCCTCCAGCTGC 367
Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655
||||||||| |||| |||||||||||||| ||||| ||||| ||||| || ||| ||
Sbjct 366 TTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGAATGCCTTCCTTATCCTGAATCTTA 307
Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715
|| || | || | || || | ||||||||| | ||| | || || || |||
Sbjct 306 GCCTTCACGTTCTCAATTGTATCGGATGGCTCGACCTCCAGGGTGATGGTCTTTCCTGTC 247
Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738
|| || || || |||||||||||
Sbjct 246 AGGGTCTTCACGAAAATCTGCAT 224
Score = 109 bits (120), Expect = 5e-19
Identities = 147/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||| |||| || || || || ||||||||||| ||| || ||| || ||||||
Sbjct 205 CACCAGATGGAGAGTCGATTCCTTCTGAATGTTGTAGTCGGACAGAGTACGACCATCCTC 146
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| ||||||||| |||| |||||||||||||| ||||| ||||| ||||| ||
Sbjct 145 CAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGGATGCCTTCCTTATCCTG 86
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| || || || | || | || || | ||||||||| | || | || ||
Sbjct 85 AATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGACCTCCAGAGTGATGGTCTT 26
Query 118709 GCCGGTCAGAGTTTTTACAAAAATC 118733
|| ||||| || || || ||||||
Sbjct 25 TCCTGTCAGGGTCTTCACGAAAATC 1
>seq610
Length=159711
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||| |||| || || || || || |||||||| ||| || ||| || ||||||
Sbjct 159326 CACCAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTC 159267
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| ||||||||| |||| |||||||||||||| ||||| ||||| ||||| ||
Sbjct 159266 CAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGGATGCCTTCCTTATCCTG 159207
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| || || || | || | || || | ||||||||| | || | || ||
Sbjct 159206 AATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGACCTCCAGAGTGATGGTCTT 159147
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| ||||| || || || |||||||||||
Sbjct 159146 TCCTGTCAGGGTCTTCACGAAAATCTGCAT 159117
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| |||| || || || || || |||||||| ||| || ||| || ||||||
Sbjct 159553 ACCAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTCC 159494
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| ||||||||| |||| |||||||||||||| ||||| ||||| ||||| || |
Sbjct 159493 AGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGGATGCCTTCCTTATCCTGA 159434
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | || | || || | ||||||||| | || | || ||
Sbjct 159433 ATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGACCTCCAGAGTGATGGTCTTT 159374
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| ||||| || || || |||||||||||
Sbjct 159373 CCTGTCAGGGTCTTCACGAAAATCTGCAT 159345
>seq111
Length=461598
Score = 109 bits (120), Expect = 5e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||||| || | || || || || ||||| ||||| ||| || ||| || ||
Sbjct 359666 CAGCACCAGATGAAGCGTCGATTCCTTCTGAATATTGTAGTCGGACAGAGTACGTCCGTC 359725
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| ||||| || |||||| |||| |||||||||||||| || || ||||||||||||||
Sbjct 359726 TTCCAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCCGGCGGAATGCCCTCCTTGTC 359785
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
|| || || || | |||| || |||| | ||||||||| | ||| | ||
Sbjct 359786 CTGGATCTTGGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTGATGGT 359845
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || ||||| || || ||||||||
Sbjct 359846 CTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 359878
>seq1047
Length=31309
Score = 104 bits (114), Expect = 2e-17
Identities = 178/257 (69%), Gaps = 6/257 (2%)
Strand=Plus/Plus
Query 133080 ATCTCCCATGCCGTCTTGAAGAGATTCTTGACATGCTGTGGTATTTCGTCAATGTTCTGC 133139
|||||||| |||| ||| | ||||| || || || || ||||| || || || ||
Sbjct 16934 ATCTCCCAGACCGTTTTGTACAGATTGCGGATGTGTTGCGGAATTTCCTCTATCTTTTGT 16993
Query 133140 ACGGACCCGTTTTCGGCCAAAATCTTGTTGCGCAATTCCGGAGTGT---AAATGTCGAGA 133196
| || || |||| ||||| ||||||||| || ||| | || | | || |
Sbjct 16994 ATTGAGCCATTTTGGGCCAGAATCTTGTTCTTCATTTC---ATCGTCCCACAGTTCCAAT 17050
Query 133197 TCGATTAGCGCTTTGACGAGATACTGGTTGACCACTTGAAACTCGCCGGCGAGAACGCGT 133256
|| |||| |||| | | || || || || |||||||||||||| | || || |
Sbjct 17051 TCAGTTAGATCTTTTAGCAAATGATGATTCACTACTTGAAACTCGCCAGAAAGTACCCTA 17110
Query 133257 CTGAGATATACATTCGACGTGAACGGTTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCC 133316
| || ||||| || ||| | ||||| |||||||||||||| |||||||| |||||
Sbjct 17111 CGATTGTAGACATTTGAAGTGTATGGTTCAAAAGATTCGTTGTTACCGAGTATTTGCGCA 17170
Query 133317 GTCGTCGCCGTGGGCAT 133333
|||| ||| || |||||
Sbjct 17171 GTCGACGCGGTCGGCAT 17187
Score = 86.0 bits (94), Expect = 5e-12
Identities = 203/305 (67%), Gaps = 4/305 (1%)
Strand=Plus/Plus
Query 134388 TTCGAAATCAACGCGGACTCGTGTAGAGTCTTGTAAATGCCATCGACGCTGTCGTCCTTG 134447
|| || ||||| || ||| | ||||| | |||||| || |||| ||| ||||||
Sbjct 18263 TTAGAGATCAAGGCACACTGTTTAAGAGTATCGTAAATTCCCTCGATGCTATCGTCCGAC 18322
Query 134448 ATGCTTTGCAGGAAACACGAACACATTTGTTGACGACGCGTACCCGCCGAAAACAGAGTC 134507
|| | ||||||| || || ||| ||| | || | || | || | ||||| ||
Sbjct 18323 ATTGTGAGCAGGAAGCAGGACGACAGTTGCGGCCGTTGAGTTGCTGCAGCAAACATGGTT 18382
Query 134508 GGGCTCGCGTGCGTAAAGGT--GCCCAGACTCATCAACTGATATGTTTCAATGACGCTCT 134565
|| |||||||||||| || | ||| | ||| | || || || ||| | |
Sbjct 18383 GGCGAAGCGTGCGTAAAGTATCGCTCTGAC--AGCAAATTGTACGTCTCGATGGCAGAAT 18440
Query 134566 TAACGTCGTCGCCGTGAATGGCCAGAGCGACGCGCATGAGCATGTGTTGGGGTCTCTCCA 134625
|| || || || || ||| | | ||| || ||||||||||||||||| || |||||||
Sbjct 18441 CAATATCTTCACCATGTATGCCGATAGCAACACGCATGAGCATGTGTTGCGGCCTCTCCA 18500
Query 134626 TGATCACGTCGTCGATTTTTAACAAATATCCATTGGTGAGGGTTTTGAAACCGAAATATT 134685
||| | | |||||||||| |||| | | ||||||||||| || || |
Sbjct 18501 CAATCTTCCCCTTAATTTTTAACAGATATGATCTTTCCAATGTTTTGAAACCAAAGTAAT 18560
Query 134686 TGTAA 134690
|||||
Sbjct 18561 TGTAA 18565
>seq122
Length=254344
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||| | || ||||| || || ||||| || ||| || || || || ||
Sbjct 68470 ACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATAGTCGGACAGGGTACGTCCGTCTTCC 68529
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || || ||| |||| | |||||||||||| || || ||||||||||||||
Sbjct 68530 AGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGG 68589
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| ||| |||| ||| ||||| | || | ||| |||
Sbjct 68590 ATCTTGGCCTTGACGTTCTCGATGGTATCCGAAGGCTCCACCTCCAGAGTGATCGTCTTG 68649
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| |||| || || || || ||||||||
Sbjct 68650 CCAGTCAACGTCTTCACGAAGATCTGCAT 68678
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433818662176240
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