Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq56 134 3e-26 >seq56 Length=464437 Score = 134 bits (148), Expect = 3e-26 Identities = 207/293 (71%), Gaps = 2/293 (1%) Strand=Plus/Plus Query 189420 AACTCGAAAAAGCGGAAACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTGA 189479 |||| |||| ||| |||| || ||| ||| |||||| || | || |||||||||||| Sbjct 139552 AACTGGAAACGGCGAAAACCCACGATGATCTGTGGAACTCGGCCCAGTTGCAGATGGTGA 139611 Query 189480 GAGAAGGAAAAATGCATAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGA 189539 ||||| || ||||| | ||||| || ||||| ||||| |||||||| || || |||| Sbjct 139612 AGGAAGGCAAGATGCACGGGTTTTTGCGCATGTACTGGGCCAAGAAGATCCTCGAGTGGA 139671 Query 189540 CTAGAACACCTGAAGACGC-TTTGAGTTATAGTATCTATTTGAACAACAAGTACGAACTA 189598 ||| | |||| ||||| || | ||| | |||||| | ||| | | | | | Sbjct 139672 CTAAATCACCCGAAGAGGCGCTCGAG-ACTGCTATCTACCTCAACGATCGCTTCAACTTG 139730 Query 189599 GACGGCACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGAT 189658 || || ||||| ||||||||||| ||||| |||||||| || || | || ||| Sbjct 139731 GATGGGCGCGATCCGAACGGATACGTCGGTTGCATGTGGTCGATCGCTGGCATCCATGAT 139790 Query 189659 AGAGCGTGGAAAGAAAGACCGATATTTGGAAAGATAAGATATATGAATTATGA 189711 | |||||||| | ||| ||||| ||||| | || ||||||||||| Sbjct 139791 CAGGGTTGGAAAGAGCGTGAGATTTTTGGCAAGATCCGCTACATGAATTATGA 139843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923171181288800