Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq177 93.3 9e-14 >seq177 Length=205018 Score = 93.3 bits (102), Expect = 9e-14 Identities = 256/391 (65%), Gaps = 16/391 (4%) Strand=Plus/Minus Query 253998 GACCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTG 254057 || ||||| ||||| | | |||| || || ||||| || || || ||||| ||| Sbjct 106246 GATCTTCCCAATTTGTTGCTGTACGGACCACCGGGAACGGGAAAAACAAGCACCATTCTG 106187 Query 254058 GCGCTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAAC 254117 || ||||| ||||| || || | || | |||||| | |||||||||||| Sbjct 106186 GCCGCCGCCCGGCAGCTGTTTGGGGACATGTTCAAG---GAGCGCATTCTCGAGCTGAAC 106130 Query 254118 GCTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGAT- 254176 || || ||||| || || | | || |||| | ||| | || || ||| | || | Sbjct 106129 GCCTCGGACGATCGTGGAATCGCGGTGATCCGGAATAAGGTGAAAACGTTCGCACAGCTA 106070 Query 254177 --GTCGATTTCGTCG--------TTCCAACCCGGCTGTCCGCCTTTCAAGCTCGTGATCC 254226 | ||| | || | ||| ||| ||||| || || ||| |||| || | Sbjct 106069 ACGGCGAGTGGTACGCGGGCGGATGGCAAACCG--TGTCCACCGTTTAAGATCGTAATTC 106012 Query 254227 TGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAGA 254286 | || || || || | ||||| || || ||| |||| || ||||| |||||||||| Sbjct 106011 TCGATGAAGCCGATGCGATGACCCACGCAGCCCAGGCCGCTCTGCGCCGCACGATGGAGA 105952 Query 254287 CGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCATCGCCC 254346 | | | |||||| || || |||||||| |||||||||||| ||| |||| | Sbjct 105951 AGGAAACGAAAACGACGCGGTTCTGTCTGGTGTGTAACTACGTGTCGCGGATTATCGAGC 105892 Query 254347 CGCTGGCTTCTCGGTGCGCCAAGTTTCGATT 254377 || | | || || ||| ||||||| || || Sbjct 105891 CGATCACATCGCGTTGCACCAAGTTCCGCTT 105861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073735858056960