Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq122 129 5e-25 seq673 93.3 3e-14 >seq122 Length=254344 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| || ||||||||| ||||| |||||| ||| || |||| ||| Sbjct 68470 ACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATAGTCGGACAGGGTACGTCCGTCTTCC 68529 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| ||||| ||||| || || || || | |||||||||||| Sbjct 68530 AGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGG 68589 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | | ||| | ||||||||||| || ||||||||| Sbjct 68590 ATCTTGGCCTTGACGTTCTCGATGGTATCCGAAGGCTCCACCTCCAGAGTGATCGTCTTG 68649 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| |||||||| ||||| ||||| Sbjct 68650 CCAGTCAACGTCTTCACGAAGATCTGCAT 68678 >seq673 Length=25255 Score = 93.3 bits (102), Expect = 3e-14 Identities = 149/213 (70%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| ||||| || ||||||||| ||||||||||| || || |||| |||| Sbjct 24432 CAAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCGTCCTCCA 24491 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 | || || |||||||| |||| ||||| || || || || | |||||||||||| | Sbjct 24492 GCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGGA 24551 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 | || ||| || | | | | ||||| ||| ||||| | || || ||||||| Sbjct 24552 TCTTCGCCTTCACATTCTCGATGGTGTCCGATGGCTCGACCTCGAGTGTGATGGTCTTGC 24611 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATGTTGC 45341 | || || || ||||| || || ||||| |||| Sbjct 24612 CGGTGAGCGTTTTCACGAAAATCTGCATTTTGC 24644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395064510746620