Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq1047 432 5e-116
>seq1047
Length=31309
Score = 432 bits (478), Expect = 5e-116
Identities = 1236/1884 (66%), Gaps = 30/1884 (2%)
Strand=Plus/Plus
Query 62037 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 62096
||||| | |||||| ||||| | | || ||||| ||||||| ||| ||||| ||
Sbjct 16730 TTGTCAACTGTGAACTGAATCGCATTAACAGCTGGTTTGGTACGTAAATAATACATCCCG 16789
Query 62097 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA 62156
||||| || || | |||| ||||| ||||| || |||||||| || | ||
Sbjct 16790 GTTTTAAGGCCCATCTTCCAGCCGTAGAAATGAATTGATGTTAGTTTACCGTAGTTTGGC 16849
Query 62157 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 62216
|| |||| || ||||| | ||| || ||| || ||||| ||||| | ||| || |||
Sbjct 16850 TCAGCTACGTGAATATTGAAAGACTGCGATTGGTCAATGAATGCTCCTCGGTCGGCCGCC 16909
Query 62217 ATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATC 62275
||||| ||| || || | ||| ||||| | ||||| || | | || | | |
Sbjct 16910 ATTTTGATGCAAGTTTTCACAGAAATCTCCCAGACCGTTTTGTACAGATTGCGGA-TGTG 16968
Query 62276 TTCTGGAAGGTT---TGTATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGAT 62332
|| |||| | | | || || || || ||| | ||| |||| | ||||| ||
Sbjct 16969 TTGCGGAATTTCCTCTATCTTTTGTATTGAGCCATTTTGGGCCAGAATCTTGTTCTTCAT 17028
Query 62333 CTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTG 62392
||||| | ||| | || || |||| | || | || | ||| | || ||||||||
Sbjct 17029 TTCATCGTCCCACAGTTCCAATTCAGTTAGATCTTTTAGCAAATGATGATTCACTACTTG 17088
Query 62393 GAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTC 62452
|| || ||||| | ||| || ||| |||| | ||| || || ||||| | || ||
Sbjct 17089 AAACTCGCCAGAAAGTACCCTACGATTGTAGACATTTGAAGTGTATGGTTCAAAAGATTC 17148
Query 62453 ATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATT 62512
|| || || | ||||| ||||| || || ||||||||||| || | | | |||
Sbjct 17149 GTTGTTACCGAGTATTTGCGCAGTCGACGCGGTCGGCATAGGCGCTAAAAGCAGGGAATT 17208
Query 62513 TCTAAGACCGTATGTTCTGATTTTATCTTTTA-GATGTTCCCAATTCCAAAGATCCGACG 62571
| | || | ||| || || ||||||| | | |||||| ||| | |||| |
Sbjct 17209 GCGCACGCCATGTGTCACAATATT-TCTTTTAAGCTCAGCCCAATCCCACAATTCCGTAG 17267
Query 62572 G-TACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGC-GTACGATCCTACATA 62629
| | | | || || || || || || || | | || ||| ||||
Sbjct 17268 GCTTCTTCTCCCACATGTCG-TACTGAAGGATTCCTTTGCTAACTGGACT-TCCATCATA 17325
Query 62630 TGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATA 62689
|| || ||||| || |||| | || | || || ||||| || | || ||| | ||
Sbjct 17326 TGATTCGTATGGACCATCCTGTGCGGCCAATTCGCAGCTCGCTTCAAGGGCTCCGAAGTA 17385
Query 62690 AATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATT 62749
|||||||||||| || | | ||| | || ||||| || || | || |
Sbjct 17386 AATGGTTTCAAACATTTGTTGATTCAACAGCTGGGCTTCTTCACTTTCGTAAGGGTGGCG 17445
Query 62750 TAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTT 62809
| | || || || || || | ||||| || || || || || || | || | | |
Sbjct 17446 CATCAAGATGAAAGCATCTGCCATGCCTTGCACTCCGATCCCTATCGGACGGTGGCGCAT 17505
Query 62810 ATTAGA--GATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 62867
||| || | ||| ||||| |||| |||||||||||| ||||| || ||||| || |||
Sbjct 17506 ATTGGATCGCTTT--GCTTCCGGAACAGGATAATAATTTATATCGATGATTTTGTTAAGA 17563
Query 62868 TTTCTGACAATTACTTTGACCACATCCTTCAG-TTTGAGAAAATCAAATCGCCCATC--- 62923
|| | || |||| | || ||||| || |||| |||| ||| || | |||
Sbjct 17564 TTCTTAGTAACAGTTTTGGCTACTTCCTTTAGCTTTGCGAAA-TCATATGTACGATCGGG 17622
Query 62924 TATTACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATC 62983
| | ||||||||||| || |||| || ||||| |||||||| || | |||| | |
Sbjct 17623 TTTCACAAACATGTTTAAGGCAATCGAGGCCAGGTTACACACAGCAATTTCAT---CTTT 17679
Query 62984 CGCA---TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTG 63040
| | |||| || || || ||||| || || ||||||||| ||||| | ||||||
Sbjct 17680 TGAAGAGTATTCTACAATTTCGGTGCACAGGTTTGAACACTTGATCGTTCCGATATTTTG 17739
Query 63041 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAAT 63100
|| |||||||| || |||||||| || ||||| ||| | || ||||||||||
Sbjct 17740 CTGGTTACTCTTACGATTGCACGCATCTTTGTAAAGCATGTAAGGCACTCCAGTTTCAAC 17799
Query 63101 CTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCT 63160
||| ||||||||||| || ||| | || | ||||||| | | || | | |
Sbjct 17800 CTGTGATTCTATAATTGCGAACCATAAATCTTGTGCCTTTACTTGACGGGTGAAACGACC 17859
Query 63161 TTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCT 63220
|| | ||||| ||| || | | ||||||||| || ||||| | |||||
Sbjct 17860 CTCGCGCTCGTAGCCAGTGTAGAGTTTTTCGAACTCCTCACCCCATGTCTCCGACAATCC 17919
Query 63221 AGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAA 63280
|||||| || | || ||||| | |||| | ||| | | ||| || | ||| ||
Sbjct 17920 AGGACAGTCGTGAGGGCACATTAGACTCCACATTTCGTTGGCTTCCACACGCTGCATGAA 17979
Query 63281 GAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGT 63340
| |||||||||||| || || || | || |||| | || || || || ||
Sbjct 17980 CAAATCAGGAATCCACAGCGCGTAGAACATGTCCCTTGCGCGGACCTCTTCTTTGCCAGT 18039
Query 63341 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 63400
|||||||| ||||| | ||| | | | ||| |||||| || |||| || || ||
Sbjct 18040 GTTCTTTTTTAGATCCAAAAACTCAAATACATCCCCATGCCATGGCTCCAGATAGATAGC 18099
Query 63401 CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 63460
| |||| || || ||||| ||||| || || | || | || || ||||| || ||
Sbjct 18100 AAAGGCTCCGGGTCGCTTGTTACCTCCTTGGTCAACATAACGTGCAGTATTATTGTAGAC 18159
Query 63461 TCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACT 63520
| || ||| || | | |||||| || |||||||| || || | ||||| ||| |
Sbjct 18160 GCGCAGCATCGGTACTAAACCGTTCGAAATACCATTCGTTCCTGCAATATATGTTCCTTT 18219
Query 63521 GGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 63578
|| | ||| | | ||| | | ||||| || || ||| ||||||||| || ||
Sbjct 18220 CGCCCTAATGCAGTGTACATTCA--GGCCTATGCCACCAGCCGATTTAGAGATCAAGGCA 18277
Query 63579 CATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAA 63638
|| |||| | || || || || || || |||||||| || ||| | || || ||
Sbjct 18278 CACTGTTTAAGAGTATCGTAAATTCCCTCGATGCTATCGTCCGACATTGTGAGCAGGAAG 18337
Query 63639 CAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 63698
||| |||| ||| | || |||| | ||| ||| | ||| || ||||||||||||
Sbjct 18338 CAGGACGACAGTTGCGGCCGTTGAGTTGCTGCAGCAAACATGGTTGGCGAAGCGTGCGTA 18397
Query 63699 AACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGA 63758
|| || || || || | |||||||||||| || || || || ||||| |||
Sbjct 18398 AAGTATCGCTCTGACAGCAAATTGTACGTCTCGATGGCAGAATCAATATCTTCACCATGT 18457
Query 63759 ATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATT 63818
|| || | || |||||||| | |||||| || || || || ||||| || || |||
Sbjct 18458 ATGCCGATAGCAACACGCATGAGCATGTGTTGCGGCCTCTCCACAATCTTCCCCTTAATT 18517
Query 63819 TTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGT 63878
|| |||| || ||| ||||||| ||||| |||||||| || ||||| |||||| ||
Sbjct 18518 TTTAACAGATATGATCTTTCCAATGTTTTGAAACCAAAGTAATTGTAACCAAAGTCACGG 18577
Query 63879 TCGTAAATAATAACCGAATTGAGC 63902
||||| || || | ||||| |||
Sbjct 18578 TCGTAGATGATCGCAGAATTAAGC 18601
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629800122561600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |