Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq1047 228 8e-55
seq14 114 1e-20
>seq1047
Length=31309
Score = 228 bits (252), Expect = 8e-55
Identities = 1163/1835 (63%), Gaps = 22/1835 (1%)
Strand=Plus/Plus
Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849
||||||||||| | || | ||| || | ||| || | | ||||||||| || |||
Sbjct 16733 TCAACTGTGAACTGAATCGCATTAACAGCTGGTTTGGTACGTAAATAATACATCCCGGTT 16792
Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909
|| || |||| |||| ||||| ||||| || || ||||| |||| | || | |
Sbjct 16793 TTAAGGCCCATCTTCCAGCCGTAGAAATGAATTGATGTTAGTTTACCGTAGTTTGGCTCA 16852
Query 36910 TCTATAT--ATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCA 36967
||| | |||||| | || || ||| || || || || |||| |||||| ||||
Sbjct 16853 GCTACGTGAATATTGAAA--GACTGCGATTGGTCAATGAATGCTCCTCGGTCGGCCGCCA 16910
Query 36968 TTTCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTAT 37027
||| | | ||| ||| |||||||| |||||||| || | | || | |
Sbjct 16911 TTTTGATGCAAGTTTTCACAGAAATCTCCCAGACCGTTTTGTACAGATTGCGGATGTGTT 16970
Query 37028 CTGGTAAATC---TAAATGTTGAATAGAACCATTATGTAACACAATTGTATTCTTTATGT 37084
|| | || || | ||| || || ||||| || || ||| | ||||| || |
Sbjct 16971 GCGGAATTTCCTCTATCTTTTGTATTGAGCCATTTTGGGCCAGAATCTTGTTCTTCATTT 17030
Query 37085 CATTATTCCACATATTTCTACTTA-TTAGTTCTCTCAATAGGTGTGGATTTACAACCTGA 37143
||| | ||||| || | | | | |||| ||| | | | || |||| || || |||
Sbjct 17031 CATCGTCCCACAG-TTCCAATTCAGTTAGATCTTTTAGCAAATGATGATTCACTACTTGA 17089
Query 37144 AAATCTCCAGATAATACTCTTC--TTGTATATATATTGCTAGTATATGGTTCAATGGACT 37201
|| || ||||| | ||| || | ||||| | || ||| ||| |||||||||| || |
Sbjct 17090 AACTCGCCAGAAAGTACCCTACGATTGTAGACAT-TTGA-AGTGTATGGTTCAAAAGATT 17147
Query 37202 CATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTAT 37261
| || |||| | |||||| | || || || || ||||| || |||| || ||| ||
Sbjct 17148 CGTTGTTACCGAGTATTTGCGCAGTCGACGCGGTCGGCATAGGCGCTAAAAGCAGGGAAT 17207
Query 37262 TTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTG 37321
| | || |||||||| ||| | |||| || ||| ||||||||| || || || |
Sbjct 17208 TGCGCACGCCATGTGTCACAATATTTCTTTTAAGCTCAGCCCAATCCCACAATTCCGTAG 17267
Query 37322 GGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATG 37381
| ||||| |||||| || || || || || ||||| || ||||| | | |||||
Sbjct 17268 GCTTCTTCTCCCACATGTCGTACTGAAGGATTCCTTTGCTAACTGGACTTCCATCATATG 17327
Query 37382 TCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATA 37441
|| || || || | | || | |||||| || | ||| || || | | || |
Sbjct 17328 ATTCGTATGGACCATCCTGTGCGGCCAATTCGCAGCTCGCTTCAAGGGCTCCGAAGTAAA 17387
Query 37442 TTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCA 37501
| ||||| || |||||| ||| || | | |||||||| || ||| | | | || ||
Sbjct 17388 TGGTTTCAAACATTTGTTGATTCAACAGCTGGGCTTCTTCACTTTCGTAAGGGTGGCGCA 17447
Query 37502 ATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTAT 37561
|| || || |||| |||| || || || ||||| ||||| || | || | |||
Sbjct 17448 TCAAGATGAAAGCATCTGCCATGCCTTGCACTCCGATCCCTATCGGACGGTGGCGCATAT 17507
Query 37562 TAGATCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTT 37621
| |||| | ||| || ||||||||||| ||||| || ||||| || ||||| |
Sbjct 17508 TGGATCGCTTTGCTTCCGGAACAGGATAATAATTTATATCGATGATTTTGTTAAGATTCT 17567
Query 37622 TAACTAGTATTTTCG-TAATTATTCTCAACTTGTCGAA--CATAAATACG-TTATTATTA 37677
|| | |||| | || || | | | ||| |||| |||| |||| | ||
Sbjct 17568 TAGTAACAGTTTTGGCTACTTCCT-TTAGCTTTGCGAAATCATATGTACGATCGGGTTTC 17626
Query 37678 ACAAATTTACTCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTA 37737
||||| | | || | ||| || | || ||||| ||||||| |||||||| |
Sbjct 17627 ACAAACATGTTTAAGGCAATCGAGGCCAGGTTACACACAGCAATTTCATCTTTTGAAGAG 17686
Query 37738 AATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTG 37797
||| || ||| || || || || || | | || ||||| | ||| || ||
Sbjct 17687 TATTCTACAATTTCGGTGCACAGGTTTGAACACTTGATCGTTCCGATATTTTGCTGGTTA 17746
Query 37798 GATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCC 37857
|| ||| || | |||||| || || || || ||| ||| ||| | || |
Sbjct 17747 CTCTTACGATTGCACGCATCTTTGTAAAGCATGTAAGGCACTCCAGTTTCAACCTGTGAT 17806
Query 37858 TCGATAATAGATTTCCATAAA-CTTCTTGCTTTAACGATCGCTTTAAtttttttCTTTGT 37916
|| ||||| | ||||||| ||| | ||||| || | || ||
Sbjct 17807 TCTATAATTGCGAACCATAAATCTTGTGCCTTTACTTGACGGGTGAA-ACGACCCTCGCG 17865
Query 37917 TTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACA 37976
||||| | | || | ||| | || || | |||||| || | ||||| |||||
Sbjct 17866 CTCGTAGCCAGTGTAGAGTTTTTCGAACTCCTCACCCCATGTCTCCGACAATCCAGGACA 17925
Query 37977 TTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATC 38036
||| || ||||||||| ||| ||| | ||| || || | ||| || |||||
Sbjct 17926 GTCGTGAGGGCACATTAGACTCCACATTTCGTTGGCTTCCACACGCTGCATGAACAAATC 17985
Query 38037 AGGTACCCATAATGCAGTA-AATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCT 38095
||| | ||| | || ||| || | || | | | ||||| || || ||||
Sbjct 17986 AGGAATCCACAGCGC-GTAGAACATGTCCCTTGCGCGGACCTCTTCTTTGCCAGTGTTCT 18044
Query 38096 TTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTG 38155
|| ||| | ||| || |||| ||| | |||||||| || | ||| || | | |
Sbjct 18045 TTTTTAGATCCAAAAACTCAAATACATCCCCATGCCATGGCTCCAGATAGATAGCAAAGG 18104
Query 38156 CTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTA 38215
|||| |||| || | |||||| || | || ||| | | || ||||| || | | |
Sbjct 18105 CTCCGGGTCGCTTGTTACCTCCTTGGTCAACATAACGTGCAGTATTATTGTAGACGCGCA 18164
Query 38216 ACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTC 38275
||| ||||||| ||| || || | || || | || | ||||| || || || || |
Sbjct 18165 GCATCGGTACTAAACCGTTCGAAATACCATTCGTTCCTGCAATATATGTTCCTTTCGCCC 18224
Query 38276 GTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTT 38335
|| || || ||||| ||||| || ||| || || || || || ||||
Sbjct 18225 TAATGCAGTGTACATTCAGGCCTATGCCACCAGCCGATTTAGAGATCAAGGCACACTGTT 18284
Query 38336 TTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAG 38395
| | ||||| | || || || || || || ||| |||| || | || || |
Sbjct 18285 TAAGAGTATCGTAAATTCCCTCGATGCTATCGTCCGACATTGTGAGCAGGAAGCAGGACG 18344
Query 38396 ACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATT 38455
||| ||| ||| | ||||| | || ||| | || || || || || | || ||
Sbjct 18345 ACAGTTGCGGCCGTTGAGTTGCTGCAGCAAACATGGTTGGCGAAGCGTGCGTAAAGTATC 18404
Query 38456 TTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTA 38515
|| |||| |||| || || || || || ||| ||||| | || || || || |
Sbjct 18405 GCTCTGACAGCAAATTGTACGTCTCGATGGCAGAATCAATATCTTCACCATGTATGCCGA 18464
Query 38516 GAGATACCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAGTA 38575
|| || | ||| ||||| ||||| || || || | || || || ||| | |
Sbjct 18465 TAGCAACACGCATGAGCATGTGTTGCGGCCTCTCCACAATCTTCCCCTTAATTTTTAACA 18524
Query 38576 GATACGATTTTTCTAATGTTTTTATTCCAAAATAA 38610
|||| ||| |||| |||||||| | ||||| |||
Sbjct 18525 GATATGATCTTTCCAATGTTTTGAAACCAAAGTAA 18559
>seq14
Length=264275
Score = 114 bits (126), Expect = 1e-20
Identities = 269/404 (67%), Gaps = 3/404 (1%)
Strand=Plus/Plus
Query 11432 ACTTTTTCACAACCTAACTCTGTTAATAATCTATCTGCGACGAATTCTATATACTGAGAC 11491
|| || ||||| || ||||| || | | ||| || ||||| || || ||||| |||
Sbjct 132099 ACCTTCTCACAGCCCAACTCCACCAACAGACGATCCGCCACGAACTCGATGTACTGCGAC 132158
Query 11492 ATTAAACAACAATTCATACCTATAAGATCCACCGGAATAGCAACTGTCAAAAACTCCTTT 11551
|| | ||||||||||| | | ||| || || | || |||| |||||||
Sbjct 132159 ATGAGCTCGCAATTCATACCCAACATATCGACAGGCAGTGCTTTCGTCAGGAACTCCTGC 132218
Query 11552 TCTATATTAACCGCATCAATGATTATCGACGTTATAACTTCCTTAGATGGTGGATGTAAT 11611
|| || | || |||||| ||| || ||||| || |||||| ||||
Sbjct 132219 TCGATCATGACTGCATCACGGATGATATCCGTTACGCGTTTGCGCGATGGTTTCTGTACC 132278
Query 11612 AAATGTTTAAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGT 11671
| || || ||||| | ||| ||||| || |||||||||||||| || | || ||
Sbjct 132279 AGATACTTGAACATGAGACAGGCAAAGTCGCAATGTAAACCTTCATCGCGCGAGATCAGC 132338
Query 11672 TCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCA 11731
|| || || || || | || ||||||| || || || |||| ||| || || ||||||
Sbjct 132339 TCGTTGGAGAACGTCAGACCCGGCATCAGGCCACGCTTCTTTAGCCAGAAGATGGCAGCA 132398
Query 11732 AATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATA- 11790
|| ||| ||||| || ||||| || ||||| || || || | | || || ||
Sbjct 132399 AAGCTGCCACTGAAGAAGATACCCTCGACGGCTGCGAACGCCACGATACGCTCGCCGTAG 132458
Query 11791 -TA-CCTTGTTGCTAGATATCCATTTTCTGGCCCAATCAGCTTT 11832
|| |||| ||||| || ||||| || | ||||| || || ||
Sbjct 132459 TTAGCCTTCTTGCTCGAGATCCAGTTCATCGCCCAGTCCGCCTT 132502
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468511798436800
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