Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq1047 228 8e-55 seq14 114 1e-20 >seq1047 Length=31309 Score = 228 bits (252), Expect = 8e-55 Identities = 1163/1835 (63%), Gaps = 22/1835 (1%) Strand=Plus/Plus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 ||||||||||| | || | ||| || | ||| || | | ||||||||| || ||| Sbjct 16733 TCAACTGTGAACTGAATCGCATTAACAGCTGGTTTGGTACGTAAATAATACATCCCGGTT 16792 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909 || || |||| |||| ||||| ||||| || || ||||| |||| | || | | Sbjct 16793 TTAAGGCCCATCTTCCAGCCGTAGAAATGAATTGATGTTAGTTTACCGTAGTTTGGCTCA 16852 Query 36910 TCTATAT--ATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCA 36967 ||| | |||||| | || || ||| || || || || |||| |||||| |||| Sbjct 16853 GCTACGTGAATATTGAAA--GACTGCGATTGGTCAATGAATGCTCCTCGGTCGGCCGCCA 16910 Query 36968 TTTCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTAT 37027 ||| | | ||| ||| |||||||| |||||||| || | | || | | Sbjct 16911 TTTTGATGCAAGTTTTCACAGAAATCTCCCAGACCGTTTTGTACAGATTGCGGATGTGTT 16970 Query 37028 CTGGTAAATC---TAAATGTTGAATAGAACCATTATGTAACACAATTGTATTCTTTATGT 37084 || | || || | ||| || || ||||| || || ||| | ||||| || | Sbjct 16971 GCGGAATTTCCTCTATCTTTTGTATTGAGCCATTTTGGGCCAGAATCTTGTTCTTCATTT 17030 Query 37085 CATTATTCCACATATTTCTACTTA-TTAGTTCTCTCAATAGGTGTGGATTTACAACCTGA 37143 ||| | ||||| || | | | | |||| ||| | | | || |||| || || ||| Sbjct 17031 CATCGTCCCACAG-TTCCAATTCAGTTAGATCTTTTAGCAAATGATGATTCACTACTTGA 17089 Query 37144 AAATCTCCAGATAATACTCTTC--TTGTATATATATTGCTAGTATATGGTTCAATGGACT 37201 || || ||||| | ||| || | ||||| | || ||| ||| |||||||||| || | Sbjct 17090 AACTCGCCAGAAAGTACCCTACGATTGTAGACAT-TTGA-AGTGTATGGTTCAAAAGATT 17147 Query 37202 CATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTAT 37261 | || |||| | |||||| | || || || || ||||| || |||| || ||| || Sbjct 17148 CGTTGTTACCGAGTATTTGCGCAGTCGACGCGGTCGGCATAGGCGCTAAAAGCAGGGAAT 17207 Query 37262 TTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTG 37321 | | || |||||||| ||| | |||| || ||| ||||||||| || || || | Sbjct 17208 TGCGCACGCCATGTGTCACAATATTTCTTTTAAGCTCAGCCCAATCCCACAATTCCGTAG 17267 Query 37322 GGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATG 37381 | ||||| |||||| || || || || || ||||| || ||||| | | ||||| Sbjct 17268 GCTTCTTCTCCCACATGTCGTACTGAAGGATTCCTTTGCTAACTGGACTTCCATCATATG 17327 Query 37382 TCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATA 37441 || || || || | | || | |||||| || | ||| || || | | || | Sbjct 17328 ATTCGTATGGACCATCCTGTGCGGCCAATTCGCAGCTCGCTTCAAGGGCTCCGAAGTAAA 17387 Query 37442 TTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCA 37501 | ||||| || |||||| ||| || | | |||||||| || ||| | | | || || Sbjct 17388 TGGTTTCAAACATTTGTTGATTCAACAGCTGGGCTTCTTCACTTTCGTAAGGGTGGCGCA 17447 Query 37502 ATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTAT 37561 || || || |||| |||| || || || ||||| ||||| || | || | ||| Sbjct 17448 TCAAGATGAAAGCATCTGCCATGCCTTGCACTCCGATCCCTATCGGACGGTGGCGCATAT 17507 Query 37562 TAGATCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTT 37621 | |||| | ||| || ||||||||||| ||||| || ||||| || ||||| | Sbjct 17508 TGGATCGCTTTGCTTCCGGAACAGGATAATAATTTATATCGATGATTTTGTTAAGATTCT 17567 Query 37622 TAACTAGTATTTTCG-TAATTATTCTCAACTTGTCGAA--CATAAATACG-TTATTATTA 37677 || | |||| | || || | | | ||| |||| |||| |||| | || Sbjct 17568 TAGTAACAGTTTTGGCTACTTCCT-TTAGCTTTGCGAAATCATATGTACGATCGGGTTTC 17626 Query 37678 ACAAATTTACTCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTA 37737 ||||| | | || | ||| || | || ||||| ||||||| |||||||| | Sbjct 17627 ACAAACATGTTTAAGGCAATCGAGGCCAGGTTACACACAGCAATTTCATCTTTTGAAGAG 17686 Query 37738 AATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTG 37797 ||| || ||| || || || || || | | || ||||| | ||| || || Sbjct 17687 TATTCTACAATTTCGGTGCACAGGTTTGAACACTTGATCGTTCCGATATTTTGCTGGTTA 17746 Query 37798 GATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCC 37857 || ||| || | |||||| || || || || ||| ||| ||| | || | Sbjct 17747 CTCTTACGATTGCACGCATCTTTGTAAAGCATGTAAGGCACTCCAGTTTCAACCTGTGAT 17806 Query 37858 TCGATAATAGATTTCCATAAA-CTTCTTGCTTTAACGATCGCTTTAAtttttttCTTTGT 37916 || ||||| | ||||||| ||| | ||||| || | || || Sbjct 17807 TCTATAATTGCGAACCATAAATCTTGTGCCTTTACTTGACGGGTGAA-ACGACCCTCGCG 17865 Query 37917 TTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACA 37976 ||||| | | || | ||| | || || | |||||| || | ||||| ||||| Sbjct 17866 CTCGTAGCCAGTGTAGAGTTTTTCGAACTCCTCACCCCATGTCTCCGACAATCCAGGACA 17925 Query 37977 TTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATC 38036 ||| || ||||||||| ||| ||| | ||| || || | ||| || ||||| Sbjct 17926 GTCGTGAGGGCACATTAGACTCCACATTTCGTTGGCTTCCACACGCTGCATGAACAAATC 17985 Query 38037 AGGTACCCATAATGCAGTA-AATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCT 38095 ||| | ||| | || ||| || | || | | | ||||| || || |||| Sbjct 17986 AGGAATCCACAGCGC-GTAGAACATGTCCCTTGCGCGGACCTCTTCTTTGCCAGTGTTCT 18044 Query 38096 TTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTG 38155 || ||| | ||| || |||| ||| | |||||||| || | ||| || | | | Sbjct 18045 TTTTTAGATCCAAAAACTCAAATACATCCCCATGCCATGGCTCCAGATAGATAGCAAAGG 18104 Query 38156 CTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTA 38215 |||| |||| || | |||||| || | || ||| | | || ||||| || | | | Sbjct 18105 CTCCGGGTCGCTTGTTACCTCCTTGGTCAACATAACGTGCAGTATTATTGTAGACGCGCA 18164 Query 38216 ACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTC 38275 ||| ||||||| ||| || || | || || | || | ||||| || || || || | Sbjct 18165 GCATCGGTACTAAACCGTTCGAAATACCATTCGTTCCTGCAATATATGTTCCTTTCGCCC 18224 Query 38276 GTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTT 38335 || || || ||||| ||||| || ||| || || || || || |||| Sbjct 18225 TAATGCAGTGTACATTCAGGCCTATGCCACCAGCCGATTTAGAGATCAAGGCACACTGTT 18284 Query 38336 TTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAG 38395 | | ||||| | || || || || || || ||| |||| || | || || | Sbjct 18285 TAAGAGTATCGTAAATTCCCTCGATGCTATCGTCCGACATTGTGAGCAGGAAGCAGGACG 18344 Query 38396 ACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATT 38455 ||| ||| ||| | ||||| | || ||| | || || || || || | || || Sbjct 18345 ACAGTTGCGGCCGTTGAGTTGCTGCAGCAAACATGGTTGGCGAAGCGTGCGTAAAGTATC 18404 Query 38456 TTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTA 38515 || |||| |||| || || || || || ||| ||||| | || || || || | Sbjct 18405 GCTCTGACAGCAAATTGTACGTCTCGATGGCAGAATCAATATCTTCACCATGTATGCCGA 18464 Query 38516 GAGATACCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAGTA 38575 || || | ||| ||||| ||||| || || || | || || || ||| | | Sbjct 18465 TAGCAACACGCATGAGCATGTGTTGCGGCCTCTCCACAATCTTCCCCTTAATTTTTAACA 18524 Query 38576 GATACGATTTTTCTAATGTTTTTATTCCAAAATAA 38610 |||| ||| |||| |||||||| | ||||| ||| Sbjct 18525 GATATGATCTTTCCAATGTTTTGAAACCAAAGTAA 18559 >seq14 Length=264275 Score = 114 bits (126), Expect = 1e-20 Identities = 269/404 (67%), Gaps = 3/404 (1%) Strand=Plus/Plus Query 11432 ACTTTTTCACAACCTAACTCTGTTAATAATCTATCTGCGACGAATTCTATATACTGAGAC 11491 || || ||||| || ||||| || | | ||| || ||||| || || ||||| ||| Sbjct 132099 ACCTTCTCACAGCCCAACTCCACCAACAGACGATCCGCCACGAACTCGATGTACTGCGAC 132158 Query 11492 ATTAAACAACAATTCATACCTATAAGATCCACCGGAATAGCAACTGTCAAAAACTCCTTT 11551 || | ||||||||||| | | ||| || || | || |||| ||||||| Sbjct 132159 ATGAGCTCGCAATTCATACCCAACATATCGACAGGCAGTGCTTTCGTCAGGAACTCCTGC 132218 Query 11552 TCTATATTAACCGCATCAATGATTATCGACGTTATAACTTCCTTAGATGGTGGATGTAAT 11611 || || | || |||||| ||| || ||||| || |||||| |||| Sbjct 132219 TCGATCATGACTGCATCACGGATGATATCCGTTACGCGTTTGCGCGATGGTTTCTGTACC 132278 Query 11612 AAATGTTTAAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGT 11671 | || || ||||| | ||| ||||| || |||||||||||||| || | || || Sbjct 132279 AGATACTTGAACATGAGACAGGCAAAGTCGCAATGTAAACCTTCATCGCGCGAGATCAGC 132338 Query 11672 TCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCA 11731 || || || || || | || ||||||| || || || |||| ||| || || |||||| Sbjct 132339 TCGTTGGAGAACGTCAGACCCGGCATCAGGCCACGCTTCTTTAGCCAGAAGATGGCAGCA 132398 Query 11732 AATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATA- 11790 || ||| ||||| || ||||| || ||||| || || || | | || || || Sbjct 132399 AAGCTGCCACTGAAGAAGATACCCTCGACGGCTGCGAACGCCACGATACGCTCGCCGTAG 132458 Query 11791 -TA-CCTTGTTGCTAGATATCCATTTTCTGGCCCAATCAGCTTT 11832 || |||| ||||| || ||||| || | ||||| || || || Sbjct 132459 TTAGCCTTCTTGCTCGAGATCCAGTTCATCGCCCAGTCCGCCTT 132502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468511798436800