Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1047 491 6e-134 seq14 91.5 2e-13 >seq1047 Length=31309 Score = 491 bits (544), Expect = 6e-134 Identities = 1240/1869 (66%), Gaps = 26/1869 (1%) Strand=Plus/Plus Query 78709 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 78768 ||||| | |||||| ||||| | | || ||||| ||||||| ||| ||||| || Sbjct 16730 TTGTCAACTGTGAACTGAATCGCATTAACAGCTGGTTTGGTACGTAAATAATACATCCCG 16789 Query 78769 GTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGA 78828 ||||| || || | |||| ||||||||||| || |||||||| || | || Sbjct 16790 GTTTTAAGGCCCATCTTCCAGCCGTAGAAATGAATTGATGTTAGTTTACCGTAGTTTGGC 16849 Query 78829 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 78888 || |||| || ||||| | ||| || ||| || ||||| ||||| | ||| || ||| Sbjct 16850 TCAGCTACGTGAATATTGAAAGACTGCGATTGGTCAATGAATGCTCCTCGGTCGGCCGCC 16909 Query 78889 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATC 78947 ||||| ||| || || | ||| ||||| | ||||| || | | || | | | Sbjct 16910 ATTTTGATGCAAGTTTTCACAGAAATCTCCCAGACCGTTTTGTACAGATTGCGGA-TGTG 16968 Query 78948 TTCTGGAAGGTT---TGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGAT 79004 || |||| | | | || || || || ||| | |||| |||| | ||||| || Sbjct 16969 TTGCGGAATTTCCTCTATCTTTTGTATTGAGCCATTTTGGGCCAGAATCTTGTTCTTCAT 17028 Query 79005 CTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTG 79064 || || | ||| | || || |||| | || | || | ||| |||| |||||||| Sbjct 17029 TTCATCGTCCCACAGTTCCAATTCAGTTAGATCTTTTAGCAAATGATGATTCACTACTTG 17088 Query 79065 AAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTC 79124 ||| || ||||| | ||| || ||| |||| | ||| || |||||||| | ||||| Sbjct 17089 AAACTCGCCAGAAAGTACCCTACGATTGTAGACATTTGAAGTGTATGGTTCAAAAGATTC 17148 Query 79125 ATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATT 79184 || || || | ||||| ||||| || || || |||||||| || | | | ||| Sbjct 17149 GTTGTTACCGAGTATTTGCGCAGTCGACGCGGTCGGCATAGGCGCTAAAAGCAGGGAATT 17208 Query 79185 TCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATT--CCCAATCCCAAAGATCAGAC 79242 | | || | || || | | | ||||||| || | |||||||||| | || | Sbjct 17209 GCGCACGCCATGTG-TCACAATATTTCTTTTA-AGCTCAGCCCAATCCCACAATTCCGTA 17266 Query 79243 GGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTAT 79302 || | ||| | || || || || || || || ||| | ||| ||| Sbjct 17267 GGCTTCTTCTCCCACATGTCGTACTGAAGGATTCCTTTGCTAACTGGACTTCCATCATAT 17326 Query 79303 GTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAA 79362 | ||| || || || |||| | |||| ||||| || ||||| || | |||||| | ||| Sbjct 17327 GATTCGTATGGACCATCCTGTGCGGCCAATTCGCAGCTCGCTTCAAGGGCTCCGAAGTAA 17386 Query 79363 ATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTT 79422 |||||||| || || | | ||| | || |||||| || || | || | Sbjct 17387 ATGGTTTCAAACATTTGTTGATTCAACAGCTGGGCTTCTTCACTTTCGTAAGGGTGGCGC 17446 Query 79423 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 79482 | | || || || ||||| | ||||| || || || || || || | || | | || Sbjct 17447 ATCAAGATGAAAGCATCTGCCATGCCTTGCACTCCGATCCCTATCGGACGGTGGCGCATA 17506 Query 79483 TTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTC 79542 || || | ||||| |||| |||||||||||| ||||| || ||||| || |||||| Sbjct 17507 TTGGATCGCTTTGCTTCCGGAACAGGATAATAATTTATATCGATGATTTTGTTAAGATTC 17566 Query 79543 CTGACTATTACTTT-GACCACATCCTTTAG-TTTGAGAAAATCAAATCGTCCATC---TA 79597 | | || | ||| | | || |||||||| |||| |||| ||| || | ||| | Sbjct 17567 TT-AGTAACAGTTTTGGCTACTTCCTTTAGCTTTGCGAAA-TCATATGTACGATCGGGTT 17624 Query 79598 TTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCG 79657 | ||||||||||| || || | || ||||| ||||| || || | |||| | | | Sbjct 17625 TCACAAACATGTTTAAGGCAATCGAGGCCAGGTTACACACAGCAATTTCAT---CTTTTG 17681 Query 79658 CA---TATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTT 79714 | |||| || ||||| ||||| ||||| |||||| || ||||| | |||||| | Sbjct 17682 AAGAGTATTCTACAATTTCGGTGCACAGGTTTGAACACTTGATCGTTCCGATATTTTGCT 17741 Query 79715 GATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCT 79774 | |||||||| || |||||||| || ||||| ||| | || |||||||||| || Sbjct 17742 GGTTACTCTTACGATTGCACGCATCTTTGTAAAGCATGTAAGGCACTCCAGTTTCAACCT 17801 Query 79775 GAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTT 79834 | ||||||||||| || ||| | || | ||||||| | | || | | | Sbjct 17802 GTGATTCTATAATTGCGAACCATAAATCTTGTGCCTTTACTTGACGGGTGAAACGACCCT 17861 Query 79835 CTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAG 79894 | | ||||| || || | | ||||||||| || ||||| || ||||||| Sbjct 17862 CGCGCTCGTAGCCAGTGTAGAGTTTTTCGAACTCCTCACCCCATGTCTCCGACAATCCAG 17921 Query 79895 GACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGA 79954 |||| |||| ||| ||||| | |||| | | | | | || || | ||| || | Sbjct 17922 GACAGTCGTGAGGGCACATTAGACTCCACATTTCGTTGGCTTCCACACGCTGCATGAACA 17981 Query 79955 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTAT 80014 |||||||||||| || || || | || || | | ||| || || || || | Sbjct 17982 AATCAGGAATCCACAGCGCGTAGAACATGTCCCTTGCGCGGACCTCTTCTTTGCCAGTGT 18041 Query 80015 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 80074 ||||||| ||||| | ||| | | | ||| |||||| || |||| || || || | Sbjct 18042 TCTTTTTTAGATCCAAAAACTCAAATACATCCCCATGCCATGGCTCCAGATAGATAGCAA 18101 Query 80075 TAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 80134 |||| ||||| ||||| ||||| || || | || | || || ||||| || || | Sbjct 18102 AGGCTCCGGGTCGCTTGTTACCTCCTTGGTCAACATAACGTGCAGTATTATTGTAGACGC 18161 Query 80135 TCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGG 80194 || ||| || | | ||| || || ||||||| || || | ||||| |||| | | Sbjct 18162 GCAGCATCGGTACTAAACCGTTCGAAATACCATTCGTTCCTGCAATATATGTTCCTTTCG 18221 Query 80195 CACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 80252 | | ||| | | ||| | | ||||| || || ||| ||||||||| || || || Sbjct 18222 CCCTAATGCAGTGTACATTCA--GGCCTATGCCACCAGCCGATTTAGAGATCAAGGCACA 18279 Query 80253 TCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACA 80312 |||| | ||||| || || ||||| |||||||| || ||| | || || || || Sbjct 18280 CTGTTTAAGAGTATCGTAAATTCCCTCGATGCTATCGTCCGACATTGTGAGCAGGAAGCA 18339 Query 80313 GCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAA 80372 | |||| ||| | || |||| | ||| ||| | ||| || |||||||||||||| Sbjct 18340 GGACGACAGTTGCGGCCGTTGAGTTGCTGCAGCAAACATGGTTGGCGAAGCGTGCGTAAA 18399 Query 80373 CCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAAT 80432 || || ||||| | |||||||||||| || || || || ||||| ||| || Sbjct 18400 GTATCGCTCTGACAGCAAATTGTACGTCTCGATGGCAGAATCAATATCTTCACCATGTAT 18459 Query 80433 TCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTT 80492 || | || |||||||| | |||||| || || || || || ||||| || ||||| Sbjct 18460 GCCGATAGCAACACGCATGAGCATGTGTTGCGGCCTCTCCACAATCTTCCCCTTAATTTT 18519 Query 80493 CAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTC 80552 |||| || ||| ||||||| ||||| |||||||| || ||||| |||||| || || Sbjct 18520 TAACAGATATGATCTTTCCAATGTTTTGAAACCAAAGTAATTGTAACCAAAGTCACGGTC 18579 Query 80553 GTAAATAAT 80561 ||| || || Sbjct 18580 GTAGATGAT 18588 >seq14 Length=264275 Score = 91.5 bits (100), Expect = 2e-13 Identities = 177/259 (68%), Gaps = 7/259 (3%) Strand=Plus/Plus Query 49948 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 50007 || ||||| | ||| || || ||||| || | ||| || || | || || |||||| Sbjct 132285 TTGAACATGAGACAGGCAAAGTCGCAATGTAAACCTTCATCGCGCGAGATCAGCTCGTTG 132344 Query 50008 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAC 50067 || ||||| || || ||||| ||||||||||| || ||||| || |||| ||||| Sbjct 132345 GAGAACGTCAGACCCGGCATCAGGCCACGCTTCTTTAGCCAGAAGATGGCAGCAAAGCTG 132404 Query 50068 CCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG 50127 ||| |||||||| || || || || || || || || | | ||| || || | || Sbjct 132405 CCACTGAAGAAGATACCCTCGACGGCTGCGAACGCCACGATACGCTCGCCGTAGTTAGC- 132463 Query 50128 CTGTCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 50182 || || || ||||| || ||||| || ||||| || || || |||| || Sbjct 132464 CT-TCTTGCTCGAGATCCAGTTCATCGCCCAGTCCGCCTTACGCTTCACGCACGGCAGCG 132522 Query 50183 TTTCTATGGCATTAAAGAG 50201 | || |||||||| || || Sbjct 132523 TCTCGATGGCATTGAACAG 132541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718248868040800