Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq1047 491 6e-134
seq14 91.5 2e-13
>seq1047
Length=31309
Score = 491 bits (544), Expect = 6e-134
Identities = 1240/1869 (66%), Gaps = 26/1869 (1%)
Strand=Plus/Plus
Query 78709 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 78768
||||| | |||||| ||||| | | || ||||| ||||||| ||| ||||| ||
Sbjct 16730 TTGTCAACTGTGAACTGAATCGCATTAACAGCTGGTTTGGTACGTAAATAATACATCCCG 16789
Query 78769 GTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGA 78828
||||| || || | |||| ||||||||||| || |||||||| || | ||
Sbjct 16790 GTTTTAAGGCCCATCTTCCAGCCGTAGAAATGAATTGATGTTAGTTTACCGTAGTTTGGC 16849
Query 78829 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 78888
|| |||| || ||||| | ||| || ||| || ||||| ||||| | ||| || |||
Sbjct 16850 TCAGCTACGTGAATATTGAAAGACTGCGATTGGTCAATGAATGCTCCTCGGTCGGCCGCC 16909
Query 78889 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATC 78947
||||| ||| || || | ||| ||||| | ||||| || | | || | | |
Sbjct 16910 ATTTTGATGCAAGTTTTCACAGAAATCTCCCAGACCGTTTTGTACAGATTGCGGA-TGTG 16968
Query 78948 TTCTGGAAGGTT---TGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGAT 79004
|| |||| | | | || || || || ||| | |||| |||| | ||||| ||
Sbjct 16969 TTGCGGAATTTCCTCTATCTTTTGTATTGAGCCATTTTGGGCCAGAATCTTGTTCTTCAT 17028
Query 79005 CTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTG 79064
|| || | ||| | || || |||| | || | || | ||| |||| ||||||||
Sbjct 17029 TTCATCGTCCCACAGTTCCAATTCAGTTAGATCTTTTAGCAAATGATGATTCACTACTTG 17088
Query 79065 AAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTC 79124
||| || ||||| | ||| || ||| |||| | ||| || |||||||| | |||||
Sbjct 17089 AAACTCGCCAGAAAGTACCCTACGATTGTAGACATTTGAAGTGTATGGTTCAAAAGATTC 17148
Query 79125 ATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATT 79184
|| || || | ||||| ||||| || || || |||||||| || | | | |||
Sbjct 17149 GTTGTTACCGAGTATTTGCGCAGTCGACGCGGTCGGCATAGGCGCTAAAAGCAGGGAATT 17208
Query 79185 TCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATT--CCCAATCCCAAAGATCAGAC 79242
| | || | || || | | | ||||||| || | |||||||||| | || |
Sbjct 17209 GCGCACGCCATGTG-TCACAATATTTCTTTTA-AGCTCAGCCCAATCCCACAATTCCGTA 17266
Query 79243 GGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTAT 79302
|| | ||| | || || || || || || || ||| | ||| |||
Sbjct 17267 GGCTTCTTCTCCCACATGTCGTACTGAAGGATTCCTTTGCTAACTGGACTTCCATCATAT 17326
Query 79303 GTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAA 79362
| ||| || || || |||| | |||| ||||| || ||||| || | |||||| | |||
Sbjct 17327 GATTCGTATGGACCATCCTGTGCGGCCAATTCGCAGCTCGCTTCAAGGGCTCCGAAGTAA 17386
Query 79363 ATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTT 79422
|||||||| || || | | ||| | || |||||| || || | || |
Sbjct 17387 ATGGTTTCAAACATTTGTTGATTCAACAGCTGGGCTTCTTCACTTTCGTAAGGGTGGCGC 17446
Query 79423 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 79482
| | || || || ||||| | ||||| || || || || || || | || | | ||
Sbjct 17447 ATCAAGATGAAAGCATCTGCCATGCCTTGCACTCCGATCCCTATCGGACGGTGGCGCATA 17506
Query 79483 TTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTC 79542
|| || | ||||| |||| |||||||||||| ||||| || ||||| || ||||||
Sbjct 17507 TTGGATCGCTTTGCTTCCGGAACAGGATAATAATTTATATCGATGATTTTGTTAAGATTC 17566
Query 79543 CTGACTATTACTTT-GACCACATCCTTTAG-TTTGAGAAAATCAAATCGTCCATC---TA 79597
| | || | ||| | | || |||||||| |||| |||| ||| || | ||| |
Sbjct 17567 TT-AGTAACAGTTTTGGCTACTTCCTTTAGCTTTGCGAAA-TCATATGTACGATCGGGTT 17624
Query 79598 TTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCG 79657
| ||||||||||| || || | || ||||| ||||| || || | |||| | | |
Sbjct 17625 TCACAAACATGTTTAAGGCAATCGAGGCCAGGTTACACACAGCAATTTCAT---CTTTTG 17681
Query 79658 CA---TATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTT 79714
| |||| || ||||| ||||| ||||| |||||| || ||||| | |||||| |
Sbjct 17682 AAGAGTATTCTACAATTTCGGTGCACAGGTTTGAACACTTGATCGTTCCGATATTTTGCT 17741
Query 79715 GATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCT 79774
| |||||||| || |||||||| || ||||| ||| | || |||||||||| ||
Sbjct 17742 GGTTACTCTTACGATTGCACGCATCTTTGTAAAGCATGTAAGGCACTCCAGTTTCAACCT 17801
Query 79775 GAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTT 79834
| ||||||||||| || ||| | || | ||||||| | | || | | |
Sbjct 17802 GTGATTCTATAATTGCGAACCATAAATCTTGTGCCTTTACTTGACGGGTGAAACGACCCT 17861
Query 79835 CTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAG 79894
| | ||||| || || | | ||||||||| || ||||| || |||||||
Sbjct 17862 CGCGCTCGTAGCCAGTGTAGAGTTTTTCGAACTCCTCACCCCATGTCTCCGACAATCCAG 17921
Query 79895 GACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGA 79954
|||| |||| ||| ||||| | |||| | | | | | || || | ||| || |
Sbjct 17922 GACAGTCGTGAGGGCACATTAGACTCCACATTTCGTTGGCTTCCACACGCTGCATGAACA 17981
Query 79955 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTAT 80014
|||||||||||| || || || | || || | | ||| || || || || |
Sbjct 17982 AATCAGGAATCCACAGCGCGTAGAACATGTCCCTTGCGCGGACCTCTTCTTTGCCAGTGT 18041
Query 80015 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 80074
||||||| ||||| | ||| | | | ||| |||||| || |||| || || || |
Sbjct 18042 TCTTTTTTAGATCCAAAAACTCAAATACATCCCCATGCCATGGCTCCAGATAGATAGCAA 18101
Query 80075 TAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 80134
|||| ||||| ||||| ||||| || || | || | || || ||||| || || |
Sbjct 18102 AGGCTCCGGGTCGCTTGTTACCTCCTTGGTCAACATAACGTGCAGTATTATTGTAGACGC 18161
Query 80135 TCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGG 80194
|| ||| || | | ||| || || ||||||| || || | ||||| |||| | |
Sbjct 18162 GCAGCATCGGTACTAAACCGTTCGAAATACCATTCGTTCCTGCAATATATGTTCCTTTCG 18221
Query 80195 CACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 80252
| | ||| | | ||| | | ||||| || || ||| ||||||||| || || ||
Sbjct 18222 CCCTAATGCAGTGTACATTCA--GGCCTATGCCACCAGCCGATTTAGAGATCAAGGCACA 18279
Query 80253 TCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACA 80312
|||| | ||||| || || ||||| |||||||| || ||| | || || || ||
Sbjct 18280 CTGTTTAAGAGTATCGTAAATTCCCTCGATGCTATCGTCCGACATTGTGAGCAGGAAGCA 18339
Query 80313 GCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAA 80372
| |||| ||| | || |||| | ||| ||| | ||| || ||||||||||||||
Sbjct 18340 GGACGACAGTTGCGGCCGTTGAGTTGCTGCAGCAAACATGGTTGGCGAAGCGTGCGTAAA 18399
Query 80373 CCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAAT 80432
|| || ||||| | |||||||||||| || || || || ||||| ||| ||
Sbjct 18400 GTATCGCTCTGACAGCAAATTGTACGTCTCGATGGCAGAATCAATATCTTCACCATGTAT 18459
Query 80433 TCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTT 80492
|| | || |||||||| | |||||| || || || || || ||||| || |||||
Sbjct 18460 GCCGATAGCAACACGCATGAGCATGTGTTGCGGCCTCTCCACAATCTTCCCCTTAATTTT 18519
Query 80493 CAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTC 80552
|||| || ||| ||||||| ||||| |||||||| || ||||| |||||| || ||
Sbjct 18520 TAACAGATATGATCTTTCCAATGTTTTGAAACCAAAGTAATTGTAACCAAAGTCACGGTC 18579
Query 80553 GTAAATAAT 80561
||| || ||
Sbjct 18580 GTAGATGAT 18588
>seq14
Length=264275
Score = 91.5 bits (100), Expect = 2e-13
Identities = 177/259 (68%), Gaps = 7/259 (3%)
Strand=Plus/Plus
Query 49948 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 50007
|| ||||| | ||| || || ||||| || | ||| || || | || || ||||||
Sbjct 132285 TTGAACATGAGACAGGCAAAGTCGCAATGTAAACCTTCATCGCGCGAGATCAGCTCGTTG 132344
Query 50008 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAC 50067
|| ||||| || || ||||| ||||||||||| || ||||| || |||| |||||
Sbjct 132345 GAGAACGTCAGACCCGGCATCAGGCCACGCTTCTTTAGCCAGAAGATGGCAGCAAAGCTG 132404
Query 50068 CCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG 50127
||| |||||||| || || || || || || || || | | ||| || || | ||
Sbjct 132405 CCACTGAAGAAGATACCCTCGACGGCTGCGAACGCCACGATACGCTCGCCGTAGTTAGC- 132463
Query 50128 CTGTCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 50182
|| || || ||||| || ||||| || ||||| || || || |||| ||
Sbjct 132464 CT-TCTTGCTCGAGATCCAGTTCATCGCCCAGTCCGCCTTACGCTTCACGCACGGCAGCG 132522
Query 50183 TTTCTATGGCATTAAAGAG 50201
| || |||||||| || ||
Sbjct 132523 TCTCGATGGCATTGAACAG 132541
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718248868040800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |