Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq1047 468 7e-127
seq14 104 3e-17
>seq1047
Length=31309
Score = 468 bits (518), Expect = 7e-127
Identities = 1240/1882 (66%), Gaps = 28/1882 (1%)
Strand=Plus/Plus
Query 70792 TTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCT 70851
||||| | ||| |||||||| | | || | ||| ||||||| ||| ||||| ||
Sbjct 16730 TTGTCAACTGTGAACTGAATCGCATTAACAGCTGGTTTGGTACGTAAATAATACATCCCG 16789
Query 70852 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGA 70911
||||| || || | |||| ||||| ||||| || |||||||| ||| | ||
Sbjct 16790 GTTTTAAGGCCCATCTTCCAGCCGTAGAAATGAATTGATGTTAGTTTACCGTAGTTTGGC 16849
Query 70912 TCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 70971
|| |||| ||||||||| | ||||| ||| || ||||| ||||| | ||| || |||
Sbjct 16850 TCAGCTACGTGAATATTGAAAGACTGCGATTGGTCAATGAATGCTCCTCGGTCGGCCGCC 16909
Query 70972 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATC 71030
||||| ||| || || | ||| ||||| | ||||| || | | || | | |
Sbjct 16910 ATTTTGATGCAAGTTTTCACAGAAATCTCCCAGACCGTTTTGTACAGATTGCGGA-TGTG 16968
Query 71031 TTCTGGAAGGTT---TGTATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGAT 71087
|| |||| | | | || || || || ||| | || | |||| | || || ||
Sbjct 16969 TTGCGGAATTTCCTCTATCTTTTGTATTGAGCCATTTTGGGCCAGAATCTTGTTCTTCAT 17028
Query 71088 CTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTG 71147
|| || | ||| | || || |||| | || | || | |||| |||| ||||||||
Sbjct 17029 TTCATCGTCCCACAGTTCCAATTCAGTTAGATCTTTTAGCAAATGATGATTCACTACTTG 17088
Query 71148 AAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTC 71207
||| || ||||| | ||| |||||| |||| | ||| || || ||||| | || ||
Sbjct 17089 AAACTCGCCAGAAAGTACCCTACGATTGTAGACATTTGAAGTGTATGGTTCAAAAGATTC 17148
Query 71208 ATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATT 71267
|| || || | ||||| ||||| || || ||||||||||| || | | || |||
Sbjct 17149 GTTGTTACCGAGTATTTGCGCAGTCGACGCGGTCGGCATAGGCGCTAAAAGCAGGGAATT 17208
Query 71268 TCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATT--CCCAATTCCAAAGATCCGAT 71325
| | ||||||| || | | | ||||||| || | |||||| ||| | ||||
Sbjct 17209 GCGCACGCCATGTG-TCACAATATTTCTTTTA-AGCTCAGCCCAATCCCACAATTCCGTA 17266
Query 71326 GG-TACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATA 71384
|| | | | || || || ||| | ||| ||||
Sbjct 17267 GGCTTCTTCTCCCACATGTCGTACTGAAGG-ATTCCTTTGCTAACTGGACTTCCATCATA 17325
Query 71385 TGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATA 71444
|| |||||||| || || | | |||| | ||| || ||||| || | ||||| | ||
Sbjct 17326 TGATTCGTATGGACCATCCTGTGCGGCCAATTCGCAGCTCGCTTCAAGGGCTCCGAAGTA 17385
Query 71445 AATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATT 71504
||||||||| || || | | ||| | || ||||| || || | || |
Sbjct 17386 AATGGTTTCAAACATTTGTTGATTCAACAGCTGGGCTTCTTCACTTTCGTAAGGGTGGCG 17445
Query 71505 TAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTT 71564
| | || || || ||||| | ||||| || || || || || || | ||| | | |
Sbjct 17446 CATCAAGATGAAAGCATCTGCCATGCCTTGCACTCCGATCCCTATCGGACGGTGGCGCAT 17505
Query 71565 ATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 71624
||| || | ||||| |||| |||||||||||| ||||| || ||||| || |||||
Sbjct 17506 ATTGGATCGCTTTGCTTCCGGAACAGGATAATAATTTATATCGATGATTTTGTTAAGATT 17565
Query 71625 TCTGACTATTACTTT-GACCACATCCTTTAG-TTTGAGAAAATCAAATCTCCCATC---T 71679
|| | || | ||| | | || |||||||| |||| |||| ||| || | | ||| |
Sbjct 17566 -CTTAGTAACAGTTTTGGCTACTTCCTTTAGCTTTGCGAAA-TCATATGTACGATCGGGT 17623
Query 71680 ATTACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCG 71739
| ||||||| ||| ||||||| || ||||| ||||| || || | |||| | |
Sbjct 17624 TTCACAAACATGTTTAAGGCAATCGAGGCCAGGTTACACACAGCAATTTCAT---CTTTT 17680
Query 71740 GCA---TATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGT 71796
| | |||| || |||||| ||||| || || ||||||||| ||||| | ||||||
Sbjct 17681 GAAGAGTATTCTACAATTTCGGTGCACAGGTTTGAACACTTGATCGTTCCGATATTTTGC 17740
Query 71797 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATC 71856
|| |||||||| || |||||||| || ||||| || | || |||||||||| |
Sbjct 17741 TGGTTACTCTTACGATTGCACGCATCTTTGTAAAGCATGTAAGGCACTCCAGTTTCAACC 17800
Query 71857 TGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTTT 71916
|| ||||||||||| || ||| | || | ||||||| | | || | |
Sbjct 17801 TGTGATTCTATAATTGCGAACCATAAATCTTGTGCCTTTACTTGACGGGTGAAACGACCC 17860
Query 71917 TCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCA 71976
|| | ||||| || || | | ||||||||| || ||||| | | ||||||
Sbjct 17861 TCGCGCTCGTAGCCAGTGTAGAGTTTTTCGAACTCCTCACCCCATGTCTCCGACAATCCA 17920
Query 71977 GGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAG 72036
||||| || | || ||||| | |||| | | | | | || || | ||| ||
Sbjct 17921 GGACAGTCGTGAGGGCACATTAGACTCCACATTTCGTTGGCTTCCACACGCTGCATGAAC 17980
Query 72037 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTA 72096
| |||||||||||| || || || | || || | | ||| || || || ||
Sbjct 17981 AAATCAGGAATCCACAGCGCGTAGAACATGTCCCTTGCGCGGACCTCTTCTTTGCCAGTG 18040
Query 72097 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 72156
|||||||| ||||| | ||| | | | ||| |||||| || |||| || || ||
Sbjct 18041 TTCTTTTTTAGATCCAAAAACTCAAATACATCCCCATGCCATGGCTCCAGATAGATAGCA 18100
Query 72157 ATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 72216
| |||| || || ||||| ||||| || || | || | || || ||||| || ||
Sbjct 18101 AAGGCTCCGGGTCGCTTGTTACCTCCTTGGTCAACATAACGTGCAGTATTATTGTAGACG 18160
Query 72217 CTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTG 72276
| || ||| || | | ||| || || |||||| || || | ||||| |||| |
Sbjct 18161 CGCAGCATCGGTACTAAACCGTTCGAAATACCATTCGTTCCTGCAATATATGTTCCTTTC 18220
Query 72277 GCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGC 72334
|| | ||| | || ||| | | ||||| || || ||| ||||||||| || || |
Sbjct 18221 GCCCTAATGCAGTGTACATTCA--GGCCTATGCCACCAGCCGATTTAGAGATCAAGGCAC 18278
Query 72335 ATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAAC 72394
| |||| | ||||| || || ||||| || ||||| ||| ||| | || || || |
Sbjct 18279 ACTGTTTAAGAGTATCGTAAATTCCCTCGATGCTATCGTCCGACATTGTGAGCAGGAAGC 18338
Query 72395 AGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAA 72454
|| |||| ||| | || |||| | ||| ||| | ||| || |||||||||||||
Sbjct 18339 AGGACGACAGTTGCGGCCGTTGAGTTGCTGCAGCAAACATGGTTGGCGAAGCGTGCGTAA 18398
Query 72455 ACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTA 72514
| || || ||||| | |||||||||||| || || || || ||||| |||||
Sbjct 18399 AGTATCGCTCTGACAGCAAATTGTACGTCTCGATGGCAGAATCAATATCTTCACCATGTA 18458
Query 72515 TTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTT 72574
| || | || |||||||| | ||| || || || || || || ||||| || ||||
Sbjct 18459 TGCCGATAGCAACACGCATGAGCATGTGTTGCGGCCTCTCCACAATCTTCCCCTTAATTT 18518
Query 72575 TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTT 72634
| |||| || ||| ||||||| ||||| |||||||| || ||||| |||||| || |
Sbjct 18519 TTAACAGATATGATCTTTCCAATGTTTTGAAACCAAAGTAATTGTAACCAAAGTCACGGT 18578
Query 72635 CGTAAATAATAACCGAATTGAG 72656
|||| || || | ||||| ||
Sbjct 18579 CGTAGATGATCGCAGAATTAAG 18600
>seq14
Length=264275
Score = 104 bits (114), Expect = 3e-17
Identities = 180/262 (69%), Gaps = 0/262 (0%)
Strand=Plus/Plus
Query 42335 TATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAAT 42394
|| || ||||| | ||| |||||||| || | |||||| || || ||||| ||
Sbjct 132642 TAGGTGTCGATAAGAAGCGAGTACATTTCGCTGTGTACGTTTTCCATCGCGATCTGGAAA 132701
Query 42395 CCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTT 42454
|| |||||||| | |||||| || |||||||| || | || |||||| | | ||||
Sbjct 132702 CCATAGAAACAGCGGGCCTCCGTCACCTGTACCTCCTGGCTGAACCGTTCAACCAGATTT 132761
Query 42455 TCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTT 42514
|||||||| || || || ||| || || || || | || || || |||| |
Sbjct 132762 TCGTTCACAATACCATCCGAGGCAGCGAAGAAGGCGAGCACGTGCGAGATGAAATGACGT 132821
Query 42515 TCGTCCGGTGTTAATTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACC 42574
|| |||| | | | || ||| || || || || || || | ||| || ||||| |||
Sbjct 132822 TCACTCGGTTTCAGTGAATCCCAGTCTTTCATGTCCTTTGAGAGATCCACCTCTTCGACC 132881
Query 42575 GTCCAAAATGATGCTTCTGCCT 42596
||||| || || ||||| ||||
Sbjct 132882 GTCCAGAAAGAAGCTTCGGCCT 132903
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671120575887200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |