Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq1479 219 6e-52
seq90 187 4e-42
seq1047 129 9e-25
seq14 118 2e-21
seq1066 100 4e-16
seq196 87.8 3e-12
>seq1479
Length=14069
Score = 219 bits (242), Expect = 6e-52
Identities = 396/573 (69%), Gaps = 16/573 (3%)
Strand=Plus/Plus
Query 127102 TTGCGGTAAAAGATGACTCCGGCTCGAGGACCTCTGAGAGTCTTGTGCGTTGTAGTGGTC 127161
|||||| | ||||| || |||||||| || || | ||| ||||| || ||||| ||| |
Sbjct 12174 TTGCGGAAGAAGATAACGCCGGCTCGGGGTCCACGGAGTGTCTTATGGGTTGTCGTGCTG 12233
Query 127162 ACAATGTCACAATACTCAAAGGGGCCAGGAATGACTTTGCCCGCAATCAAGCCCGCAATG 127221
|||| |||| ||||| || || || ||||| | |||| | ||| | |||
Sbjct 12234 ACAACGTCAGCGTACTCGAACGGTGACGGGATGACACCAGCTGCAACGAGGCCGGAGATG 12293
Query 127222 TGTGCAATATCGGCCATCAGCAAGGAGCCGG-CTGCATCGGCAATCTCTCGGAATCGTCT 127280
|| || ||||| || | ||| ||| ||| ||| || |||||||| ||||| ||| |
Sbjct 12294 TGCGCCATATCAGCGAACAGGTAGGCACCGTTCTGG-TCTGCAATCTCGCGGAAGCGTTT 12352
Query 127281 ATAGTCCAAGCGCCGAGGATAGCAACTGGTGCCGGCTATGATTAGCCTAGGTTTGAATAG 127340
|| |||| || || | |||||| | |||| || ||||| | | | || || || ||
Sbjct 12353 GTAATCCAGGCAGCGCGAATAGCACGAGATGCCAGCAATGATGACCTTCGGCTTAAACAG 12412
Query 127341 ATTGGCACTCTCGGCAAGTTTGGCATAGTCGACGAGTCCAGTCTGAGGATCCACCTTGTA 127400
||| ||| | |||||| |||| |||| | ||||||| | |||||||||||
Sbjct 12413 GCGGGCCGACTCCTCGAGTTTGTCATAATCGATCAAGCCAGTCTTGGCGTCCACCTTGTA 12472
Query 127401 CGGCATGCTTTCGAAAAAGAGTGATGTAGCGGACA-------CG-TTGCG----GAATCC 127448
||||||||| ||||| |||| || || ||||| | || ||||| ||| ||
Sbjct 12473 CGGCATGCTCTCGAAGAAGATGGAGGTGGCGGAGATTTTCTTCGTTTGCGTCATGAAACC 12532
Query 127449 GTGCGTCAGGTGGCCTCCGTCGGGCAGATCGAGTCCCATGATTCTACCGTGCGGTTTAAC 127508
|||||||| ||||| || || ||||| ||||| |||||||||| ||||| || | |
Sbjct 12533 ATGCGTCAGATGGCCACCATCTGGCAGGTCGAGGCCCATGATTCGCCCGTGAGGCTCGAT 12592
Query 127509 GATTCCAGTGTACACGGCAAAGTTGGCCATCGAGCCCGAGTACGGTTGTACACACACTCC 127568
| | | ||||| ||||| |||||||| ||||||||||| ||||| || ||
Sbjct 12593 CAGTGCCGTGTAGACGGCGAAGTTGGCTGGTGAGCCCGAGTATGGTTGCACGTTGCAGCC 12652
Query 127569 CCATTCGGACTCG-TTCAAATTGAACGCTCTGAGACATCGCTGCTGTGCTAGCAGTTCGA 127627
||| | | || | | || | | || ||| ||| |||| || ||||| ||||
Sbjct 12653 CCACT-GCTCTGGATCCAGGCGGTATGCCTCGAGGGCCCGCCGCTGAGCCAGCAGCTCGA 12711
Query 127628 TGCGATCGATAAACTCGTTACCACCATAGTATC 127660
| ||||| ||||||||||| || |||||||
Sbjct 12712 TCTCGTCGATGAACTCGTTACCGCCGTAGTATC 12744
Score = 84.2 bits (92), Expect = 3e-11
Identities = 139/201 (69%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 126723 ACCACGGGTCGTCACCGCAGGAGTACCGAGTCTGATGCCGCTTGGTCTGAGAGCGCTCTT 126782
||| || ||||||| || || |||||||| | ||||| || |||| || |||
Sbjct 11753 ACCGCGTGTCGTCAAGGCCGGTGTACCGAGCCGAATGCCAGAAGGATTGAGGGCCGACTT 11812
Query 126783 GTCTCCGGGTACTGTGTTTTTGTTGCAAGCGATTCTGCACAGTTCGAGGATGCGCTCTGC 126842
||| || ||||| ||||| |||||||| ||||| | ||||||||| ||| ||
Sbjct 11813 GTCACCCGGTACCGTGTTCTTGTTGCACGCGATCGAAATCTCCTCGAGGATGTACTCGGC 11872
Query 126843 CGGTGCTCCTGCGAGTCCCACACTGCGCAAATCCACTAGAATCAGATGCACATCGGTACC 126902
| || || | || || || |||| ||| ||||| | || ||||||||||| ||
Sbjct 11873 TCGCGCACCGGTGATGCCGACCGGACGCAGATCGACTAGCACGAGGTGCACATCGGTGCC 11932
Query 126903 GCCAGTGGTGACGGTGTAGCC 126923
||| || | || | ||||||
Sbjct 11933 GCCCGTCGCCACCGAGTAGCC 11953
>seq90
Length=513413
Score = 187 bits (206), Expect = 4e-42
Identities = 396/586 (68%), Gaps = 10/586 (2%)
Strand=Plus/Minus
Query 49794 TTACCGTGGAGCCTCCCATGTTTCTATACATGATGGCCTTCATGACGACCACGGTCATCG 49853
|| |||| || || ||||||| || ||||||||||| || ||| ||| ||||| | |
Sbjct 135977 TTTCCGTCGAACCGACCATGTTCCTGTACATGATGGCATTTATGCTGACATCGGTCGTGG 135918
Query 49854 AGCAGGCGTTTTACGTGTACCAAGCGTGCACCGTCAACCATGGCTACTCGCCAGAGGTGT 49913
|||| || |||| | | ||| |||| ||||||||| | || || ||||||| || | |
Sbjct 135917 AGCAAGCATTTTTCCTTTACAAAGCCTGCACCGTCGATCACGGGTACTCGCACGAAATCT 135858
Query 49914 GCCACAACATTAGCCAGTACGATGACATCAACAACCGAGTCCAGCAGACTGTGTCTACAT 49973
| | ||||| |||||| | |||||||| || |||||| || ||| || |
Sbjct 135857 GTCTTAACATCGAGCAGTACCAGGACATCAAGAAGGAGGTCCAGGTCACGACGTCCACCT 135798
Query 49974 TTCATCAGTGGAACGGTGTAGCCAGTCATGTGGTGCCCTTTATATTGGCCTTTTTCCTAG 50033
|||| ||||||||| | |||| ||||||| ||| | | ||||| | || || |
Sbjct 135797 TTCACCAGTGGAACAACATCGCCATGTATGTGGTACCCATCTTCCTGGCCATGTTTCTCG 135738
Query 50034 GATCCTATAGTGATAGGCGCGGTAGAAAGATTGTACTCGTATGTGGACTCGTAGGTAAAC 50093
| ||| ||| || | || | ||| || || ||| || || | || || |
Sbjct 135737 GTGCCTGGTCGGATCGGAGAGGCCGTAAGCTTCCGCTGGTACTCGGGCTGATCGGGAAGC 135678
Query 50094 TCTTTTTCTCGGCAATGCTAACCGTAAACAGTCTCAAG---AGCTGGCCCGTAGAGTATA 50150
| || | ||||| ||| || || || | | | | | |||||||| ||||| |
Sbjct 135677 TGTTCTACTCGGTCATGATAGTGGTGAATACCCGGATGCCCACGTGGCCCGTCGAGTACA 135618
Query 50151 TAATCTACACGGCATCCTTTCCGAGTGCACTCACCGGAGCCGATTTGACCATATTCG-CA 50209
| |||||||| || | | || |||| || ||||| || ||| | | || || | ||
Sbjct 135617 TTATCTACACAGCGACACTGCCCAGTGTGCTGACCGGTGCTGATATAGCGATCTTTGCCA 135558
Query 50210 GCGTGCTTTGCCTACATTGCCGATGTGTCGACTGTGGAGAATCGCACGCTACGAGTGGGC 50269
|| |||||||| ||||| ||||| | |||| ||||| | |||||||| || |
Sbjct 135557 GC-TGCTTTGCTTACATCTCCGATATCACGACGGTGGAACAGCGCACGCTGCGTATAACG 135499
Query 50270 ATCTTGGATGCCGTCTACCTGAGCACGATGCCAACCGGTGTGGCGATCGGTAGTGTGCTG 50329
|| | ||||| |||||||||||||||||| | |||||| || |||||| |||| |
Sbjct 135498 ATTCTCGATGCGACCTACCTGAGCACGATGCCGATCGGTGTAGCACTCGGTAATGTGATC 135439
Query 50330 TGGAAGCGATTCCG----ATCCTACCCCATCATGTTTGCAATCAAT 50371
| || | | ||| ||| ||| | |||||||| | ||||||
Sbjct 135438 TTCAA-CCACACCGGCAAATCGTACACGATCATGTTCACCATCAAT 135394
>seq1047
Length=31309
Score = 129 bits (142), Expect = 9e-25
Identities = 329/495 (66%), Gaps = 8/495 (2%)
Strand=Plus/Minus
Query 96829 TAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGATACGTTACACAGGGCGGCAATA 96888
|||| || ||||| | | |||||| | |||| || ||| || || || || |
Sbjct 18176 TAGTACCGATGCTGCGCGTCTACAATAATACTGCACGTTATGTTGACCAAGGAGGTAACA 18117
Query 96889 AACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTA 96948
| || || || || | || |||| |||| || ||||| | ||| || ||||| |||
Sbjct 18116 AGCGACCCGGAGCCTTTGCTATCTATCTGGAGCCATGGCATGGGGATGTATTTGAGTTTT 18057
Query 96949 TCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCAC 97008
| || | || ||| ||||| ||||||| || || |||||| |||| || || |
Sbjct 18056 TGGATCTAAAAAAGAACACTGGCAAAGAAGAGGTCCGCGCAAGGGACATGTTCTACGCGC 17997
Query 97009 TCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGT 97068
| ||| | || |||||||||||| |||| || | | | | ||||| |||||||
Sbjct 17996 TGTGGATTCCTGATTTGTTCATGCAGCGTGTGGAAGCCAACGAAATGTGGAGTCTAATGT 17937
Query 97069 GCCC---CGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAGT 97125
|||| ||||| || || || |||| || ||||| || ||||| || |
Sbjct 17936 GCCCTCACGACT-GT--CCTGGATTGTCGGAGACATGGGGTGAGGAGTTCGAAAAACTCT 17880
Query 97126 ACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGCACGAGAACTGTGGA 97185
|||| | |||||||| ||||| || | | | | ||| | |||| ||| | |||
Sbjct 17879 ACACTGGCTACGAGCGCGAGGGTCGTTTCACCCGTCAAGTAAAGGCACAAGATTTATGGT 17820
Query 97186 AGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCG 97245
|| || | | ||||| || |||||| || ||||| || ||||| ||| ||
Sbjct 17819 TCGCAATTATAGAATCACAGGTTGAAACTGGAGTGCCTTACATGCTTTACAAAGAT-GCG 17761
Query 97246 TG-AATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACG 97304
|| ||||| || || ||||| | | | || || |||||| | || || ||||||||
Sbjct 17760 TGCAATCGTAAGAGTAACCAGCAAAATATCGGAACGATCAAGTGTTCAAACCTGTGCACC 17701
Query 97305 GAAATTGTAGAGTAC 97319
||||||||||| |||
Sbjct 17700 GAAATTGTAGAATAC 17686
>seq14
Length=264275
Score = 118 bits (130), Expect = 2e-21
Identities = 199/286 (70%), Gaps = 13/286 (5%)
Strand=Plus/Minus
Query 125038 AGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATT 125097
|||| | || || || ||||||||||||||||| ||||| || |||||| || | || |
Sbjct 132903 AGGCCGAAGCTTCTTTCTGGACGGTCGAAGAGGTGGATCTCTCAAAGGACATGAAAGACT 132844
Query 125098 GGGAGACTCGTTTGACTGAAAC----TGAGCGAGAGTTTATATCGCACATTTTGGCCTTC 125153
|||| || |||||||| ||| || | || || |||||| | | ||||||
Sbjct 132843 GGGA-------TTCACTGAAACCGAGTGAACGTCATTTCATCTCGCACGTGCTCGCCTTC 132791
Query 125154 TTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTT 125212
|| || | ||| ||||| || || ||||| ||||| ||||| ||| ||| || ||| |
Sbjct 132790 TTCGCTGCCTCGGATGGTATTGTGAACGAAAATCTGGTTGA-ACGGTTCAGCCAGGAGGT 132732
Query 125213 GACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTC 125272
| | |||| || || || || ||||| ||| ||| || ||||| |||
Sbjct 132731 ACAGGTGACGGAGGCCCGCTGTTTCTATGGTTTCCAGATCGCGATGGAAAACGTACACAG 132672
Query 125273 GGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCGCAA 125318
||||||||||| || || |||| |||||||| |||||| ||
Sbjct 132671 CGAAATGTACTCGCTTCTTATCGACACCTACATTCGGGATCCGAAA 132626
>seq1066
Length=67579
Score = 100 bits (110), Expect = 4e-16
Identities = 226/340 (66%), Gaps = 0/340 (0%)
Strand=Plus/Minus
Query 70074 TGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGACTGCGAGA 70133
|||||||||| || || ||||||||| | |||| || ||| ||| | ||| |
Sbjct 16291 TGGGGCCAGTTTATGGGTTCCAGTGGCGTCACTTTGGAGCCACGTACGGCACATGCCACG 16232
Query 70134 CAGACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATCATTGACACTCTCAAGACCA 70193
|| || | || ||||| ||||| || | |||||| |||| || |||| ||
Sbjct 16231 ATGATTACACAGGCAAGGGTAAGGATCAGCTGGCGGAAATCATCGACAAGCTGAAGAACA 16172
Query 70194 ATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGG 70253
|||| || || | ||||| | || || | ||||| || | || | | | ||||
Sbjct 16171 ATCCCACCGACCGTCGGATCATCCTGAGCGCCTGGAACCCGGTGGACATTCCCATTATGG 16112
Query 70254 CACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTACGATGGCAAATTGTCATGCT 70313
| || ||||| || |||||||||| ||||||||| | | | || | |||| |||
Sbjct 16111 CTCTTCCACCTTGCCACTGTTTGGTACAGTTTTACGTGGCCAACGGTGAGCTGTCGTGCC 16052
Query 70314 TAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATT 70373
||||| || | ||||| | || | || || || || |||||||| ||||| |
Sbjct 16051 AGATGTACCAACGATCCGCCGATGTAGGGTTGGGCGTGCCATTCAACATTGCGAGCTACT 15992
Query 70374 CTATGTTGACGCACATGATTGCTCACATTACCGGCCTGAA 70413
| || | ||||||||||| || || | || || |||||
Sbjct 15991 CGCTGCTAACGCACATGATCGCGCATGTAACGGGACTGAA 15952
>seq196
Length=65403
Score = 87.8 bits (96), Expect = 3e-12
Identities = 132/184 (72%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 134242 TCACAAATCAGTTGTGCGATGCGATCACCCTT--TGACACTACAAAGTCGTCATCGGAAT 134299
|| ||||| | ||| ||||| ||||| ||||| |||| || |||| | | ||| ||
Sbjct 36742 TCGCAAATGAATTGGGCGATACGATCGCCCTTCTTGAC-CTCGAAAGCTGCC-TCGCCAT 36799
Query 134300 GGTTAAAGAGGACCACTCCAATGTTTCCAGTATAGTCGCGGTCCACGACACCGGCTCCGA 134359
|||| || || || || || | |||||| ||| || ||| || || ||||||||||
Sbjct 36800 GGTTGAACAGCACAACACCGACGTTTCCGCGATAATCTTCGTCAACTACTCCGGCTCCGA 36859
Query 134360 CGTCGATTCCGTACTTGGCTGCCAGTTTGGATCGCGGAGCAATCCTACCGTAGCAACCTT 134419
||||||| || || |||||||| ||| || || || | || |||||||| || |
Sbjct 36860 CGTCGATGAAGTTTTTCACTGCCAGTCCGGAACGAGGCGCCACCCGGCCGTAGCATCCCT 36919
Query 134420 CCGG 134423
||||
Sbjct 36920 CCGG 36923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741038635607200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |