Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq196 190 2e-43 >seq196 Length=65403 Score = 190 bits (210), Expect = 2e-43 Identities = 243/335 (73%), Gaps = 0/335 (0%) Strand=Plus/Plus Query 5503 GCCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCTTC 5562 ||||||||| || ||||| |||| ||| | ||| |||||| || | | || |||||| Sbjct 36660 GCCCGTGGAACCAAATCCTCCTGAGCCACGTTCGGTATCGGTAAGCGAAGGCAGCTCTTC 36719 Query 5563 CACATCGGGGAACGCAGCGCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTAC 5622 || |||||| | || ||||| || | || || || || |||||| |||| || Sbjct 36720 CAGCTCGGGGTAAGCTATCTTTTCGCAAATGAATTGGGCGATACGATCGCCCTTCTTGAC 36779 Query 5623 CTCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGC 5682 ||||||| | | ||| |||||||||||| || || ||||| ||||| || || | Sbjct 36780 CTCGAAAGCTGCCTCGCCATGGTTGAACAGCACAACACCGACGTTTCCGCGATAATCTTC 36839 Query 5683 GTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGC 5742 ||| | || || || || ||||||||||||| || || ||||| ||||| || || || Sbjct 36840 GTCAACTACTCCGGCTCCGACGTCGATGAAGTTTTTCACTGCCAGTCCGGAACGAGGCGC 36899 Query 5743 CACGCGGCCGTAGCACCCATCGGGAAGCTGTATCTGCAGGTCCGTGAACACCACTCGCCG 5802 ||| ||||||||||| || || |||| ||| | ||| | ||| || | ||||| || Sbjct 36900 CACCCGGCCGTAGCATCCCTCCGGAACCTGCACCTGAATGTCGGTCATCACCAGCAGCTT 36959 Query 5803 ACCGCCCGCAGGGACGATGCAGTCGCAAGCGCTGC 5837 |||| |||||| ||| || ||||| | ||||||| Sbjct 36960 GCCGCGCGCAGGAACGGTGTAGTCGTATGCGCTGC 36994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430042764340640