Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_005856.1
Length=94800
Score E
Sequences producing significant alignments: (Bits) Value
seq730 154 9e-33
>seq730
Length=89331
Score = 154 bits (170), Expect = 9e-33
Identities = 200/271 (74%), Gaps = 4/271 (1%)
Strand=Plus/Plus
Query 12579 AGGATATCGGAGATCCAGCCTGCTTTACGCTTCAGCGTCTTCAGTCGGTATTCATCGAAA 12638
||||| ||| | ||| | || || ||||| ||||| ||| |||| |||||||||
Sbjct 5184 AGGATCTCGAACTGCCACTCGGCCTTGCGCTTGAGCGTTGACAGGCGGTGCTCATCGAAA 5243
Query 12639 GAACCCTTGCCGCAGTAGTAGTGAACGCGAACGCTTGCACGGTT-GGAACCAACTCGGGC 12697
|| |||||||| |||||||||||| ||||| |||| | | || || || || ||
Sbjct 5244 GAGCCCTTGCCCATGTAGTAGTGAACTCGAACT-TTGCTCTGCGAGGCCCCTACGCGAGC 5302
Query 12698 ACCGCGACCGTTACGCTGTGCGATACTGGCTGGTGTCCATGGCAACGTCAGATGATGGAT 12757
|| || || || || || || ||||| |||||||| |||| ||||| ||||||||
Sbjct 5303 TCCACGGCCATTCCGTTGCTTAATGCTGGCGGGTGTCCACGGCAGGGTCAGGTGATGGAT 5362
Query 12758 GTCAGTCGTTCCTCGATGCAGGTTGATACCCACCTCTGCCTTTTTGTTGCAGATGATGAT 12817
||| |||||||| | |||||||| | ||||||||| ||||| ||||||||||| | ||
Sbjct 5363 GTCGGTCGTTCCATGGTGCAGGTTTACACCCACCTCGGCCTTCTTGTTGCAGATCAGAAT 5422
Query 12818 -CGGAGTCCGGCCCTCCTGGAAGTCGGCAGC 12847
|||| | || || || | | || |||| ||
Sbjct 5423 GCGGAAT-CGCCCTTCGTTGTAGGCGGCGGC 5452
Score = 136 bits (150), Expect = 2e-27
Identities = 558/860 (65%), Gaps = 35/860 (4%)
Strand=Plus/Minus
Query 26595 GTCA-CAGCCTGCTTGTGCGCTTCTCCTGATAAA--GCCTGCATCTGGACAAAATCATTG 26651
|||| ||| |||||||||||| || || |||| | ||| |||||| |||||| |
Sbjct 88135 GTCAGCAGTCTGCTTGTGCGCCTCACCGGATAGATAGCC--CATCTGAACAAAACTCGGG 88078
Query 26652 GCTGCCGCATTAAGCGCCGTCAGAACATTACGCATATCCGGATCAGGTTCTTCTGCAACC 26711
|| ||| | || || |||||||| | || || || || || ||||| ||||| | ||
Sbjct 88077 GCCGCCACGTTCAGGGCCGTCAGGATGTTGCGGATCTCGGGGTCAGGCTCTTCCACTGCC 88018
Query 26712 ATCCTTACCAGGCGCGCATCC---TTATATGCCTTGGCAAAGATCGCGTTTTGTATACGG 26768
| || | ||| || ||| || || |||||||| || || ||| || || |||
Sbjct 88017 AGCCGGAGCAG---CGACTCCGATTTGTACGCCTTGGCGAATATGGCGGCCTGAATCCGG 87961
Query 26769 TCTACAAGTTGCCGTGTTGGTCGCCCATCTTCAGTTACAAGGCCAGCCGCCTG-TGTGGC 26827
|| |||| ||| ||| || || || ||| |||| | || || ||||| | | |
Sbjct 87960 TCAACAACCTGCTTTGTCGGGCGACCGTCTGCAGTGAGGTATCCGGCGGCCTGCTCCGCC 87901
Query 26828 ACCAACTTGCGTCATAAATCCGCGAATAAACGCGTCATTACTG-CGGCTAAGCAGATCTC 26886
||| |||| |||| ||| | | ||| | || ||| |||| || |||||| |
Sbjct 87900 CCCAGCTTG-GTCAGGAATGACTGCACAAATGGACGGTTGCTGGCGGCCAA-CAGATCCC 87843
Query 26887 CGCTTTCTGACGGGTTA-AAAAGCGCCATCATCGCCGGTGT-TATGCTGTCGGCATCAAC 26944
| | || | ||| | ||||| ||||||||| | || ||| ||||| || ||
Sbjct 87842 CCCCCTC-GCTGGGAGAGAAAAGGGCCATCATCTT-GTCGTCTATCTCCTCGGCGTCTAC 87785
Query 26945 AAAAGCCTTTTCACTGGCTGCCATTTCCTGAAGATCAGAAATATTTGAGTCCTTGGCAAA 27004
|| | || | | ||||| |||| || ||||| ||||| ||||| |||| ||
Sbjct 87784 CCGGGCGATCTCTGTCGGAGCCATCCCCTGCAGGTCAGAGATATTGGAGTCTCTGGCGAA 87725
Query 27005 CTGAACGCGGTCAACCTTAGTTAACCGGCGGCGCACCAGTACCGGAGCCGTCAT----TG 27060
||| |||||| ||||| | | || | |||| | || || ||| ||
Sbjct 87724 CTGGGCGCGGTTAACCTCATCGAGGCGAACCCTGACCATGATAGGCTCCCGCATACCCTG 87665
Query 27061 ATTCAA--CCTT-TTCAGGAGGTATGCCGAATTCGGTCGCATGATCAATCAGGTACTCAC 27117
| || |||| |||||| ||| | | |||| || | ||||||| | |
Sbjct 87664 AATCTGGCCCTTGTTCAGGCCGTACAGCT-------TGGCATTGTCGAGCAGGTACGCCC 87612
Query 27118 GATACCGATCCGCATTGCCGTCCTG-ATAGGCTTTGATGATCCCCATGGTCCGTCCATTA 27176
| ||| | || ||| | || |||| |||||| |||||| ||| || || || |||
Sbjct 87611 GGTACTGGTCTGCAGTACCA-CCTGCATAGGCCCGGATGATAGACATTGTTCGACCGTTA 87553
Query 27177 CCTGACTCAACGGCATTGTCCTCACCAATTATCGGCGCGCCATGGCTGGATAAACCGGAA 27236
|||||||| || | || || | |||||||||||||| ||||| | || |||
Sbjct 87552 CCTGACTCCACCACCAGATCAGGGCCGACAATCGGCGCGCCATGACTGGAAAGCCCCGAA 87493
Query 27237 TCGGTAAGCTGGGCAGGACGCAAATCCTTGGATATCTGGTTGACCTGAAGAAGACTGGAT 27296
|| | |||||||| |||||||| | || ||| || | | || ||| || | ||||
Sbjct 87492 TCCGCCAGCTGGGCCGGACGCAAGTTCTGGGACATTTTGGCGATCTGCAGGATGGAGGAT 87433
Query 27297 GCGCGGGTCCGGTCGCGCGGCTGAAGTTCCTGGGGATAGTCAGGGTTAATTTTCCCGTCC 27356
||||| || || || ||||| || || || |||||||| | || || | ||||||
Sbjct 87432 TTACGGGTGCGATCCCGGGGCTGCAGCTCTTGCGGATAGTCGGTATTGATCCTGCCGTCC 87373
Query 27357 AGAGTATTGGATACCAAAAGAGCCGAGGCATCGACGATATCAAACGCTGTTTTTACCTCG 27416
|| ||||| | || | ||| || || | | || || ||||| |||||
Sbjct 87372 TGATCGTTGGAGGGGATCAGCGAACTGGCCTCAACCACCACGAAGGCGGTTTTCACCTCA 87313
Query 27417 TCACCCTTCGCTGTCACCAC 27436
|| || ||||| || || ||
Sbjct 87312 TCCCCTTTCGCCGTGACTAC 87293
Score = 82.4 bits (90), Expect = 5e-11
Identities = 131/187 (70%), Gaps = 6/187 (3%)
Strand=Plus/Plus
Query 92151 GGAAATGAGGAGGCGTTGGCTGGTGAACACGCCGATCATCTCTTGTATATCATCGACGAA 92210
|| |||||||| | | |||||||| |||||| || | || || ||| | || ||
Sbjct 32872 GGCAATGAGGAATCTCTCGCTGGTGAGCACGCCCTCCACATGTTCTACATCGTGGATGAG 32931
Query 92211 GCGTCGGGTGTGAGTGATAAAGCATTCAGTGTGATAACAGGTGCGCTGACCGGTAAGG-- 92268
||||| || || || ||||| || | ||||| | || |||||||| | |||
Sbjct 32932 GCGTCCGGCGTATCAGACAAAGCCTTTGGCGTGATGTCCGGGGCGCTGAC---TCAGGCC 32988
Query 92269 -ATAACCGTATTCTGCTTCTTTCCCAGCCTACGCGACCTTCAGGCTATTTCTACGATTCA 92327
| ||||| || |||| || ||||||||||| || || ||||| |||||||| ||
Sbjct 32989 GACAACCGGATGTTGCTGCTGTCCCAGCCTACTCGCAACTCTGGCTACTTCTACGACACA 33048
Query 92328 CACCACA 92334
|||||||
Sbjct 33049 CACCACA 33055
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 303226995592620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |