Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq1354 96.9 2e-15
seq1959 95.1 6e-15
seq1678 95.1 6e-15
seq1240 95.1 6e-15
seq762 91.5 8e-14
seq1677 89.7 3e-13
>seq1354
Length=96653
Score = 96.9 bits (106), Expect = 2e-15
Identities = 72/85 (85%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504
|||||| |||||| | || |||||||||| |||||||||||||||||||||||||
Sbjct 81751 AAAAATTTGATTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACG 81810
Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529
|||| ||||||||||||| |||||
Sbjct 81811 CTCTAACCAACTGAGCTATGGGGCC 81835
Score = 93.3 bits (102), Expect = 2e-14
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514
||||| | || |||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 30617 TTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 30676
Query 11515 CTGAGCTAATGGGCC 11529
|||||||| |||||
Sbjct 30677 CTGAGCTATGGGGCC 30691
Score = 93.3 bits (102), Expect = 2e-14
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514
||||| | || |||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 31213 TTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 31272
Query 11515 CTGAGCTAATGGGCC 11529
|||||||| |||||
Sbjct 31273 CTGAGCTATGGGGCC 31287
>seq1959
Length=111567
Score = 95.1 bits (104), Expect = 6e-15
Identities = 70/81 (86%), Gaps = 1/81 (1%)
Strand=Plus/Minus
Query 11449 ATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCT 11508
||||||| | ||| || |||||||||| |||||||||||||||||||||||||||||
Sbjct 72202 ATCAAATGGCTCCA-GAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCT 72144
Query 11509 RACCAACTGAGCTAATGGGCC 11529
||||||||||||| |||||
Sbjct 72143 AACCAACTGAGCTATGGGGCC 72123
Score = 93.3 bits (102), Expect = 2e-14
Identities = 82/102 (80%), Gaps = 7/102 (7%)
Strand=Plus/Minus
Query 11434 TAGAATTAATAAAA------AATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTC 11487
|||||| || |||| ||||| || | ||| || |||||||||| ||||||||
Sbjct 72751 TAGAATAAACAAAATAGTAGAATCATATGGCTCCA-GAGAGGATCGAACTCACGACCTTC 72693
Query 11488 GCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
||||||||||||||||||||| ||||||||||||| |||||
Sbjct 72692 GCGTTATTAGCACGACGCTCTAACCAACTGAGCTATGGGGCC 72651
Score = 86.0 bits (94), Expect = 3e-12
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||| | || |||||||||| ||||||||||||||||||||||||||||| |||| |
Sbjct 74919 TGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 74860
Query 11516 TGAGCTAATGGGCC 11529
||||||| |||||
Sbjct 74859 TGAGCTATGGGGCC 74846
>seq1678
Length=1064
Score = 95.1 bits (104), Expect = 6e-15
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||| | || |||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 735 TGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 794
Query 11516 TGAGCTAATGGGCCGT 11531
||||||| |||||||
Sbjct 795 TGAGCTATGGGGCCGT 810
>seq1240
Length=1116
Score = 95.1 bits (104), Expect = 6e-15
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 11454 ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513
|||||| | || |||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 775 ATTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCA 834
Query 11514 ACTGAGCTAATGGGCC 11529
||||||||| |||||
Sbjct 835 ACTGAGCTATGGGGCC 850
Score = 93.3 bits (102), Expect = 2e-14
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514
||||| | || |||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 19 TTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 78
Query 11515 CTGAGCTAATGGGCC 11529
|||||||| |||||
Sbjct 79 CTGAGCTATGGGGCC 93
>seq762
Length=8400
Score = 91.5 bits (100), Expect = 8e-14
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||| | || |||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 5538 TGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 5479
Query 11516 TGAGCTAATGGGCC 11529
||||||| |||||
Sbjct 5478 TGAGCTATGGGGCC 5465
Score = 87.8 bits (96), Expect = 9e-13
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||| | || |||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 5794 TGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 5735
Query 11516 TGAGCTA 11522
|||||||
Sbjct 5734 TGAGCTA 5728
>seq1677
Length=19600
Score = 89.7 bits (98), Expect = 3e-13
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||| | || |||||||||| ||||||||||| ||||||||||||||||| ||||||
Sbjct 1333 TGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGCTATTAGCACGACGCTCTAACCAAC 1392
Query 11516 TGAGCTAATGGGCCGT 11531
||||||| |||||||
Sbjct 1393 TGAGCTATGGGGCCGT 1408
Lambda K H
0.638 0.410 0.920
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 261484125028720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |