Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq1047 443 3e-119
seq14 82.4 1e-10
>seq1047
Length=31309
Score = 443 bits (490), Expect = 3e-119
Identities = 1231/1872 (66%), Gaps = 32/1872 (2%)
Strand=Plus/Plus
Query 61986 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 62045
||||| | |||||| ||||| | | || ||||| ||||||| ||| ||||| ||
Sbjct 16730 TTGTCAACTGTGAACTGAATCGCATTAACAGCTGGTTTGGTACGTAAATAATACATCCCG 16789
Query 62046 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA 62105
||||| || || | |||| ||||| ||||| || |||||||| || | ||
Sbjct 16790 GTTTTAAGGCCCATCTTCCAGCCGTAGAAATGAATTGATGTTAGTTTACCGTAGTTTGGC 16849
Query 62106 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 62165
|| |||| || ||||| | ||| || ||| || ||||| ||||| | ||| || |||
Sbjct 16850 TCAGCTACGTGAATATTGAAAGACTGCGATTGGTCAATGAATGCTCCTCGGTCGGCCGCC 16909
Query 62166 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATC 62224
||||| ||| || || | ||| ||||| | ||||| || | | || | | |
Sbjct 16910 ATTTTGATGCAAGTTTTCACAGAAATCTCCCAGACCGTTTTGTACAGATTGCGGA-TGTG 16968
Query 62225 TTCTGGAAGGTT---TGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGAT 62281
|| |||| | | | || || || || ||| | |||| |||| | ||||| ||
Sbjct 16969 TTGCGGAATTTCCTCTATCTTTTGTATTGAGCCATTTTGGGCCAGAATCTTGTTCTTCAT 17028
Query 62282 CTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTG 62341
||||| | ||| | || || |||| | || | || | ||| |||| ||||||||
Sbjct 17029 TTCATCGTCCCACAGTTCCAATTCAGTTAGATCTTTTAGCAAATGATGATTCACTACTTG 17088
Query 62342 AAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTC 62401
||| || ||||| | ||| || ||| |||| | ||| || || ||||| | || ||
Sbjct 17089 AAACTCGCCAGAAAGTACCCTACGATTGTAGACATTTGAAGTGTATGGTTCAAAAGATTC 17148
Query 62402 ATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATT 62461
|| || || | ||||| ||||| || || ||||||||||| || | | | |||
Sbjct 17149 GTTGTTACCGAGTATTTGCGCAGTCGACGCGGTCGGCATAGGCGCTAAAAGCAGGGAATT 17208
Query 62462 TCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTT--CCCAATTCCAAAGATCCGAC 62519
| | || | ||| || || ||||||| || | |||||| ||| | ||||
Sbjct 17209 GCGCACGCCATGTGTCACAATATT-TCTTTTA-AGCTCAGCCCAATCCCACAATTCCGTA 17266
Query 62520 GG-TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACAT 62577
|| | | | | | || || || || || | | || ||| |||
Sbjct 17267 GGCTTCTTCTCCCACATGTCGTACT-GAAGGATTCCTTTGCTAACTGGACT-TCCATCAT 17324
Query 62578 ATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAAT 62637
||| |||||||| || |||| | || | ||| || ||||| || | || ||| | |
Sbjct 17325 ATGATTCGTATGGACCATCCTGTGCGGCCAATTCGCAGCTCGCTTCAAGGGCTCCGAAGT 17384
Query 62638 AAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAAT 62697
|||||||||| || || | | ||| | || ||||| || || | || |
Sbjct 17385 AAATGGTTTCAAACATTTGTTGATTCAACAGCTGGGCTTCTTCACTTTCGTAAGGGTGGC 17444
Query 62698 TTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCT 62757
| | || || || || || | ||||| || || || || || || | || | |
Sbjct 17445 GCATCAAGATGAAAGCATCTGCCATGCCTTGCACTCCGATCCCTATCGGACGGTGGCGCA 17504
Query 62758 TATTAGA--GATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 62815
|||| || | ||| ||||| |||| |||||||||||| ||||| || ||||| || ||
Sbjct 17505 TATTGGATCGCTTT--GCTTCCGGAACAGGATAATAATTTATATCGATGATTTTGTTAAG 17562
Query 62816 ATTTCTGACAATTACTTTGACCACATCCTTCAG-TTTGAGAAAATCAAATCGCCCATC-- 62872
||| | || |||| | || ||||| || |||| |||| ||| || | |||
Sbjct 17563 ATTCTTAGTAACAGTTTTGGCTACTTCCTTTAGCTTTGCGAAA-TCATATGTACGATCGG 17621
Query 62873 -TATTACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCAT 62931
| | ||||||||||| ||||||| || ||||| ||||| || || | |||| | |
Sbjct 17622 GTTTCACAAACATGTTTAAGGCAATCGAGGCCAGGTTACACACAGCAATTTCAT---CTT 17678
Query 62932 CCGCA---TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTT 62988
| | |||| || || || ||||| || || ||||||||| ||||| | |||||
Sbjct 17679 TTGAAGAGTATTCTACAATTTCGGTGCACAGGTTTGAACACTTGATCGTTCCGATATTTT 17738
Query 62989 GTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAA 63048
| || |||||||| || |||||||| || ||||| ||| | || ||||||||||
Sbjct 17739 GCTGGTTACTCTTACGATTGCACGCATCTTTGTAAAGCATGTAAGGCACTCCAGTTTCAA 17798
Query 63049 TCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCC 63108
||| ||||||||||| || ||| | || | ||||||| | | || | | |
Sbjct 17799 CCTGTGATTCTATAATTGCGAACCATAAATCTTGTGCCTTTACTTGACGGGTGAAACGAC 17858
Query 63109 TTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATC 63168
|| | ||||| || || | | ||||||||| || ||||| | |||||
Sbjct 17859 CCTCGCGCTCGTAGCCAGTGTAGAGTTTTTCGAACTCCTCACCCCATGTCTCCGACAATC 17918
Query 63169 CAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAA 63228
||||||| || | || ||||| | |||| | ||| | | ||| || | ||| |
Sbjct 17919 CAGGACAGTCGTGAGGGCACATTAGACTCCACATTTCGTTGGCTTCCACACGCTGCATGA 17978
Query 63229 AGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTG 63288
| | |||||||||||| || || || | || || | | || || || || |
Sbjct 17979 ACAAATCAGGAATCCACAGCGCGTAGAACATGTCCCTTGCGCGGACCTCTTCTTTGCCAG 18038
Query 63289 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 63348
| |||||||| ||||| | ||| | | | ||| |||||| || |||| || || |
Sbjct 18039 TGTTCTTTTTTAGATCCAAAAACTCAAATACATCCCCATGCCATGGCTCCAGATAGATAG 18098
Query 63349 CCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 63408
| | |||| || || ||||| ||||| || || | || | || || ||||| || |
Sbjct 18099 CAAAGGCTCCGGGTCGCTTGTTACCTCCTTGGTCAACATAACGTGCAGTATTATTGTAGA 18158
Query 63409 CTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCAC 63468
| | || ||| || | | |||||| || |||||||| || || | ||||| ||||
Sbjct 18159 CGCGCAGCATCGGTACTAAACCGTTCGAAATACCATTCGTTCCTGCAATATATGTTCCTT 18218
Query 63469 TGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 63526
| || | ||| | | ||| | | ||||| || || ||| ||||||||| || ||
Sbjct 18219 TCGCCCTAATGCAGTGTACATTCA--GGCCTATGCCACCAGCCGATTTAGAGATCAAGGC 18276
Query 63527 GCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAA 63586
|| |||| | || || || || ||||| |||||||| || ||| | || || ||
Sbjct 18277 ACACTGTTTAAGAGTATCGTAAATTCCCTCGATGCTATCGTCCGACATTGTGAGCAGGAA 18336
Query 63587 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 63646
||| |||| ||| | || |||| | ||| ||| | ||| || |||||||||||
Sbjct 18337 GCAGGACGACAGTTGCGGCCGTTGAGTTGCTGCAGCAAACATGGTTGGCGAAGCGTGCGT 18396
Query 63647 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATG 63706
||| || || || || | |||||||||||| || || || || ||||| |||
Sbjct 18397 AAAGTATCGCTCTGACAGCAAATTGTACGTCTCGATGGCAGAATCAATATCTTCACCATG 18456
Query 63707 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTAT 63766
|| || | || |||||||| | |||||| || || || || || ||||| || ||
Sbjct 18457 TATGCCGATAGCAACACGCATGAGCATGTGTTGCGGCCTCTCCACAATCTTCCCCTTAAT 18516
Query 63767 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 63826
||| |||| || ||| ||||||| ||||| |||||||| || ||||| |||||| ||
Sbjct 18517 TTTTAACAGATATGATCTTTCCAATGTTTTGAAACCAAAGTAATTGTAACCAAAGTCACG 18576
Query 63827 TTCGTAAATAAT 63838
||||| || ||
Sbjct 18577 GTCGTAGATGAT 18588
>seq14
Length=264275
Score = 82.4 bits (90), Expect = 1e-10
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 33292 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 33351
|| ||||| | ||| || || ||||| || | ||| || || | || || ||||||
Sbjct 132285 TTGAACATGAGACAGGCAAAGTCGCAATGTAAACCTTCATCGCGCGAGATCAGCTCGTTG 132344
Query 33352 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGAT 33411
|| ||||| || || ||||| ||||||||||| || ||||| || |||| ||| ||
Sbjct 132345 GAGAACGTCAGACCCGGCATCAGGCCACGCTTCTTTAGCCAGAAGATGGCAGCAAAGCTG 132404
Query 33412 CCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33446
||| |||||||| || || || || || || ||
Sbjct 132405 CCACTGAAGAAGATACCCTCGACGGCTGCGAACGC 132439
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622929913215200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |