Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1047 443 3e-119 seq14 82.4 1e-10 >seq1047 Length=31309 Score = 443 bits (490), Expect = 3e-119 Identities = 1231/1872 (66%), Gaps = 32/1872 (2%) Strand=Plus/Plus Query 61986 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 62045 ||||| | |||||| ||||| | | || ||||| ||||||| ||| ||||| || Sbjct 16730 TTGTCAACTGTGAACTGAATCGCATTAACAGCTGGTTTGGTACGTAAATAATACATCCCG 16789 Query 62046 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA 62105 ||||| || || | |||| ||||| ||||| || |||||||| || | || Sbjct 16790 GTTTTAAGGCCCATCTTCCAGCCGTAGAAATGAATTGATGTTAGTTTACCGTAGTTTGGC 16849 Query 62106 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 62165 || |||| || ||||| | ||| || ||| || ||||| ||||| | ||| || ||| Sbjct 16850 TCAGCTACGTGAATATTGAAAGACTGCGATTGGTCAATGAATGCTCCTCGGTCGGCCGCC 16909 Query 62166 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATC 62224 ||||| ||| || || | ||| ||||| | ||||| || | | || | | | Sbjct 16910 ATTTTGATGCAAGTTTTCACAGAAATCTCCCAGACCGTTTTGTACAGATTGCGGA-TGTG 16968 Query 62225 TTCTGGAAGGTT---TGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGAT 62281 || |||| | | | || || || || ||| | |||| |||| | ||||| || Sbjct 16969 TTGCGGAATTTCCTCTATCTTTTGTATTGAGCCATTTTGGGCCAGAATCTTGTTCTTCAT 17028 Query 62282 CTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTG 62341 ||||| | ||| | || || |||| | || | || | ||| |||| |||||||| Sbjct 17029 TTCATCGTCCCACAGTTCCAATTCAGTTAGATCTTTTAGCAAATGATGATTCACTACTTG 17088 Query 62342 AAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTC 62401 ||| || ||||| | ||| || ||| |||| | ||| || || ||||| | || || Sbjct 17089 AAACTCGCCAGAAAGTACCCTACGATTGTAGACATTTGAAGTGTATGGTTCAAAAGATTC 17148 Query 62402 ATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATT 62461 || || || | ||||| ||||| || || ||||||||||| || | | | ||| Sbjct 17149 GTTGTTACCGAGTATTTGCGCAGTCGACGCGGTCGGCATAGGCGCTAAAAGCAGGGAATT 17208 Query 62462 TCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTT--CCCAATTCCAAAGATCCGAC 62519 | | || | ||| || || ||||||| || | |||||| ||| | |||| Sbjct 17209 GCGCACGCCATGTGTCACAATATT-TCTTTTA-AGCTCAGCCCAATCCCACAATTCCGTA 17266 Query 62520 GG-TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACAT 62577 || | | | | | || || || || || | | || ||| ||| Sbjct 17267 GGCTTCTTCTCCCACATGTCGTACT-GAAGGATTCCTTTGCTAACTGGACT-TCCATCAT 17324 Query 62578 ATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAAT 62637 ||| |||||||| || |||| | || | ||| || ||||| || | || ||| | | Sbjct 17325 ATGATTCGTATGGACCATCCTGTGCGGCCAATTCGCAGCTCGCTTCAAGGGCTCCGAAGT 17384 Query 62638 AAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAAT 62697 |||||||||| || || | | ||| | || ||||| || || | || | Sbjct 17385 AAATGGTTTCAAACATTTGTTGATTCAACAGCTGGGCTTCTTCACTTTCGTAAGGGTGGC 17444 Query 62698 TTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCT 62757 | | || || || || || | ||||| || || || || || || | || | | Sbjct 17445 GCATCAAGATGAAAGCATCTGCCATGCCTTGCACTCCGATCCCTATCGGACGGTGGCGCA 17504 Query 62758 TATTAGA--GATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 62815 |||| || | ||| ||||| |||| |||||||||||| ||||| || ||||| || || Sbjct 17505 TATTGGATCGCTTT--GCTTCCGGAACAGGATAATAATTTATATCGATGATTTTGTTAAG 17562 Query 62816 ATTTCTGACAATTACTTTGACCACATCCTTCAG-TTTGAGAAAATCAAATCGCCCATC-- 62872 ||| | || |||| | || ||||| || |||| |||| ||| || | ||| Sbjct 17563 ATTCTTAGTAACAGTTTTGGCTACTTCCTTTAGCTTTGCGAAA-TCATATGTACGATCGG 17621 Query 62873 -TATTACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCAT 62931 | | ||||||||||| ||||||| || ||||| ||||| || || | |||| | | Sbjct 17622 GTTTCACAAACATGTTTAAGGCAATCGAGGCCAGGTTACACACAGCAATTTCAT---CTT 17678 Query 62932 CCGCA---TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTT 62988 | | |||| || || || ||||| || || ||||||||| ||||| | ||||| Sbjct 17679 TTGAAGAGTATTCTACAATTTCGGTGCACAGGTTTGAACACTTGATCGTTCCGATATTTT 17738 Query 62989 GTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAA 63048 | || |||||||| || |||||||| || ||||| ||| | || |||||||||| Sbjct 17739 GCTGGTTACTCTTACGATTGCACGCATCTTTGTAAAGCATGTAAGGCACTCCAGTTTCAA 17798 Query 63049 TCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCC 63108 ||| ||||||||||| || ||| | || | ||||||| | | || | | | Sbjct 17799 CCTGTGATTCTATAATTGCGAACCATAAATCTTGTGCCTTTACTTGACGGGTGAAACGAC 17858 Query 63109 TTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATC 63168 || | ||||| || || | | ||||||||| || ||||| | ||||| Sbjct 17859 CCTCGCGCTCGTAGCCAGTGTAGAGTTTTTCGAACTCCTCACCCCATGTCTCCGACAATC 17918 Query 63169 CAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAA 63228 ||||||| || | || ||||| | |||| | ||| | | ||| || | ||| | Sbjct 17919 CAGGACAGTCGTGAGGGCACATTAGACTCCACATTTCGTTGGCTTCCACACGCTGCATGA 17978 Query 63229 AGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTG 63288 | | |||||||||||| || || || | || || | | || || || || | Sbjct 17979 ACAAATCAGGAATCCACAGCGCGTAGAACATGTCCCTTGCGCGGACCTCTTCTTTGCCAG 18038 Query 63289 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 63348 | |||||||| ||||| | ||| | | | ||| |||||| || |||| || || | Sbjct 18039 TGTTCTTTTTTAGATCCAAAAACTCAAATACATCCCCATGCCATGGCTCCAGATAGATAG 18098 Query 63349 CCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 63408 | | |||| || || ||||| ||||| || || | || | || || ||||| || | Sbjct 18099 CAAAGGCTCCGGGTCGCTTGTTACCTCCTTGGTCAACATAACGTGCAGTATTATTGTAGA 18158 Query 63409 CTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCAC 63468 | | || ||| || | | |||||| || |||||||| || || | ||||| |||| Sbjct 18159 CGCGCAGCATCGGTACTAAACCGTTCGAAATACCATTCGTTCCTGCAATATATGTTCCTT 18218 Query 63469 TGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 63526 | || | ||| | | ||| | | ||||| || || ||| ||||||||| || || Sbjct 18219 TCGCCCTAATGCAGTGTACATTCA--GGCCTATGCCACCAGCCGATTTAGAGATCAAGGC 18276 Query 63527 GCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAA 63586 || |||| | || || || || ||||| |||||||| || ||| | || || || Sbjct 18277 ACACTGTTTAAGAGTATCGTAAATTCCCTCGATGCTATCGTCCGACATTGTGAGCAGGAA 18336 Query 63587 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 63646 ||| |||| ||| | || |||| | ||| ||| | ||| || ||||||||||| Sbjct 18337 GCAGGACGACAGTTGCGGCCGTTGAGTTGCTGCAGCAAACATGGTTGGCGAAGCGTGCGT 18396 Query 63647 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATG 63706 ||| || || || || | |||||||||||| || || || || ||||| ||| Sbjct 18397 AAAGTATCGCTCTGACAGCAAATTGTACGTCTCGATGGCAGAATCAATATCTTCACCATG 18456 Query 63707 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTAT 63766 || || | || |||||||| | |||||| || || || || || ||||| || || Sbjct 18457 TATGCCGATAGCAACACGCATGAGCATGTGTTGCGGCCTCTCCACAATCTTCCCCTTAAT 18516 Query 63767 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 63826 ||| |||| || ||| ||||||| ||||| |||||||| || ||||| |||||| || Sbjct 18517 TTTTAACAGATATGATCTTTCCAATGTTTTGAAACCAAAGTAATTGTAACCAAAGTCACG 18576 Query 63827 TTCGTAAATAAT 63838 ||||| || || Sbjct 18577 GTCGTAGATGAT 18588 >seq14 Length=264275 Score = 82.4 bits (90), Expect = 1e-10 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 33292 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 33351 || ||||| | ||| || || ||||| || | ||| || || | || || |||||| Sbjct 132285 TTGAACATGAGACAGGCAAAGTCGCAATGTAAACCTTCATCGCGCGAGATCAGCTCGTTG 132344 Query 33352 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGAT 33411 || ||||| || || ||||| ||||||||||| || ||||| || |||| ||| || Sbjct 132345 GAGAACGTCAGACCCGGCATCAGGCCACGCTTCTTTAGCCAGAAGATGGCAGCAAAGCTG 132404 Query 33412 CCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33446 ||| |||||||| || || || || || || || Sbjct 132405 CCACTGAAGAAGATACCCTCGACGGCTGCGAACGC 132439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622929913215200