Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq1047 187 6e-42
>seq1047
Length=31309
Score = 187 bits (206), Expect = 6e-42
Identities = 688/1067 (64%), Gaps = 33/1067 (3%)
Strand=Plus/Minus
Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501
||||| || | ||||| || ||| | |||||||||||||| || || ||| | |||
Sbjct 18504 ATTGTGGAGAGGCCGCAACACATGCTCATGCGTGTTGCTATCGGCATACATGGTGAAGAT 18445
Query 363502 GTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACG 363561
||||| | || || || || || || | || | || || |||||||| ||
Sbjct 18444 ATTGATTCTGCCATCGAGACGTACAATTTGCTGTCAGAGCGATACTTTACGCACGCTTCG 18385
Query 363562 CCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAA 363621
||||| |||| ||| | ||||| || || |||| || ||||| || || | |
Sbjct 18384 CCAACCATGTTTGCTGCAGCAACTCAACGGCCGCAACTGTCGTCCTGCTTCCTGCTCACA 18325
Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681
||| ||||||| ||||||||| || | || || ||||| | ||||| | || ||
Sbjct 18324 ATGTCGGACGATAGCATCGAGGGAATTTACGATACTCTTAAACAGTGTGCCTTGATCTCT 18265
Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATG--TTCGTGCACA--GAACAGTTA 363737
|| || || || || || | || ||| || || | || | ||||| ||
Sbjct 18264 AAATCGGCTGGTGGCATAGGCCTGA--ATGTACACTGCATTAGGGCGAAAGGAACA--TA 18209
Query 363738 CATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACA 363796
||| || || | || || ||||| || | || || ||||| || || | | |
Sbjct 18208 TATTGCAGGAACGAATGGTATT-TCGAACGGTTTAGTACCGATGCTGCGCGTCTACAATA 18150
Query 363797 ATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATC 363856
||||||| | || || ||||| || || ||||| || || |||||||| ||||
Sbjct 18149 ATACTGCACGTTATGTTGACCAAGGAGGTAACAAGCGACCCGGAGCCTTTGCTATCTATC 18090
Query 363857 TCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAG 363916
| ||||| |||| ||| | ||||||||| | || || || ||||| || ||||
Sbjct 18089 TGGAGCCATGGCATGGGGATGTATTTGAGTTTTTGGATCTAAAAAAGAACACTGGCAAAG 18030
Query 363917 AGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGC 363976
| || | || ||| | || ||||||| || || ||| || |||| || ||| |||
Sbjct 18029 AAGAGGTCCGCGCAAGGGACATGTTCTACGCGCTGTGGATTCCTGATTTGTTCATGCAGC 17970
Query 363977 GCGTGGAGGCAGGTAAGAATTGGTCACTCT--TTTGCCCACACGAATGTCCAGGTCTTTC 364034
| ||||| || | ||| || | ||| | ||||| ||||| ||||| || | ||
Sbjct 17969 GTGTGGAAGCCA--ACGAAATGTGGAGTCTAATGTGCCCTCACGACTGTCCTGGATTGTC 17912
Query 364035 CGATGTATGGGGTGACGACTATGTTG--CTCTATACGAAAAGTATGAATCGGAGGGAAAG 364092
|| ||||||||| || | | ||||| || || | ||| | ||
Sbjct 17911 GGAGACATGGGGTGAGGAGTTCGAAAAACTCTACAC--------TGGCTACGAGCGCGAG 17860
Query 364093 GCTCGTAAGACAATTCCCGCACAG----AAGCT--ATGGTTTGCCATCATGGATTCGCAG 364146
| |||| || || | | || ||| | |||||| || || || || || |||
Sbjct 17859 GGTCGTTTCACCCGTCAAGTAAAGGCACAAGATTTATGGTTCGCAATTATAGAATCACAG 17800
Query 364147 ATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAG 364206
|||| || ||| || || ||| | ||||||||| ||||||| || ||| ||||||
Sbjct 17799 GTTGAAACTGGAGTGCCTTACATGCTTTACAAAGATGCGTGCAATCGTAAGAGTAACCAG 17740
Query 364207 CAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCT 364266
|| | | || || || || ||||| || ||||| ||| | |||||| | |
Sbjct 17739 CAAAATATCGGAACGATCAAGTGTTCAAACCTGTGCACCGAAATTGTAGAATACTCTTCA 17680
Query 364267 CCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAA--- 364323
|| || | ||| || |||||||| || ||||| || | |||||| |||
Sbjct 17679 AAAGATGAAATTGCTGTGTGTAACCTGGCCTCGATTGCCTTAAACATGTTTGTGAAACCC 17620
Query 364324 GATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTC 364383
||| |||| | ||| | | || | || ||| || | || |||| |||||
Sbjct 17619 GATCGTACATATGATTTCGCAAAGCTAAAGGAAGTAGCCAAAACTGTTACTAAGAATCTT 17560
Query 364384 GACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGT 364443
|||| | ||||| | ||||||||||| |||| ||||| |||| || ||||||||
Sbjct 17559 AACAAAATCATCGATATAAATTATTATCCTGTTCCGGAAGCAAAGCGATCCAATATGCGC 17500
Query 364444 CATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTAT 364490
|| || ||||| || | || || || ||| | || || | ||| ||
Sbjct 17499 CACCGTCCGATAGGGATCGGAGTGCAAGGCATGGCAGATGCTTTCAT 17453
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303316527736040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |