Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1047 187 6e-42 >seq1047 Length=31309 Score = 187 bits (206), Expect = 6e-42 Identities = 688/1067 (64%), Gaps = 33/1067 (3%) Strand=Plus/Minus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 ||||| || | ||||| || ||| | |||||||||||||| || || ||| | ||| Sbjct 18504 ATTGTGGAGAGGCCGCAACACATGCTCATGCGTGTTGCTATCGGCATACATGGTGAAGAT 18445 Query 363502 GTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACG 363561 ||||| | || || || || || || | || | || || |||||||| || Sbjct 18444 ATTGATTCTGCCATCGAGACGTACAATTTGCTGTCAGAGCGATACTTTACGCACGCTTCG 18385 Query 363562 CCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAA 363621 ||||| |||| ||| | ||||| || || |||| || ||||| || || | | Sbjct 18384 CCAACCATGTTTGCTGCAGCAACTCAACGGCCGCAACTGTCGTCCTGCTTCCTGCTCACA 18325 Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||| ||||||| ||||||||| || | || || ||||| | ||||| | || || Sbjct 18324 ATGTCGGACGATAGCATCGAGGGAATTTACGATACTCTTAAACAGTGTGCCTTGATCTCT 18265 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATG--TTCGTGCACA--GAACAGTTA 363737 || || || || || || | || ||| || || | || | ||||| || Sbjct 18264 AAATCGGCTGGTGGCATAGGCCTGA--ATGTACACTGCATTAGGGCGAAAGGAACA--TA 18209 Query 363738 CATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACA 363796 ||| || || | || || ||||| || | || || ||||| || || | | | Sbjct 18208 TATTGCAGGAACGAATGGTATT-TCGAACGGTTTAGTACCGATGCTGCGCGTCTACAATA 18150 Query 363797 ATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATC 363856 ||||||| | || || ||||| || || ||||| || || |||||||| |||| Sbjct 18149 ATACTGCACGTTATGTTGACCAAGGAGGTAACAAGCGACCCGGAGCCTTTGCTATCTATC 18090 Query 363857 TCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAG 363916 | ||||| |||| ||| | ||||||||| | || || || ||||| || |||| Sbjct 18089 TGGAGCCATGGCATGGGGATGTATTTGAGTTTTTGGATCTAAAAAAGAACACTGGCAAAG 18030 Query 363917 AGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGC 363976 | || | || ||| | || ||||||| || || ||| || |||| || ||| ||| Sbjct 18029 AAGAGGTCCGCGCAAGGGACATGTTCTACGCGCTGTGGATTCCTGATTTGTTCATGCAGC 17970 Query 363977 GCGTGGAGGCAGGTAAGAATTGGTCACTCT--TTTGCCCACACGAATGTCCAGGTCTTTC 364034 | ||||| || | ||| || | ||| | ||||| ||||| ||||| || | || Sbjct 17969 GTGTGGAAGCCA--ACGAAATGTGGAGTCTAATGTGCCCTCACGACTGTCCTGGATTGTC 17912 Query 364035 CGATGTATGGGGTGACGACTATGTTG--CTCTATACGAAAAGTATGAATCGGAGGGAAAG 364092 || ||||||||| || | | ||||| || || | ||| | || Sbjct 17911 GGAGACATGGGGTGAGGAGTTCGAAAAACTCTACAC--------TGGCTACGAGCGCGAG 17860 Query 364093 GCTCGTAAGACAATTCCCGCACAG----AAGCT--ATGGTTTGCCATCATGGATTCGCAG 364146 | |||| || || | | || ||| | |||||| || || || || || ||| Sbjct 17859 GGTCGTTTCACCCGTCAAGTAAAGGCACAAGATTTATGGTTCGCAATTATAGAATCACAG 17800 Query 364147 ATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAG 364206 |||| || ||| || || ||| | ||||||||| ||||||| || ||| |||||| Sbjct 17799 GTTGAAACTGGAGTGCCTTACATGCTTTACAAAGATGCGTGCAATCGTAAGAGTAACCAG 17740 Query 364207 CAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCT 364266 || | | || || || || ||||| || ||||| ||| | |||||| | | Sbjct 17739 CAAAATATCGGAACGATCAAGTGTTCAAACCTGTGCACCGAAATTGTAGAATACTCTTCA 17680 Query 364267 CCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAA--- 364323 || || | ||| || |||||||| || ||||| || | |||||| ||| Sbjct 17679 AAAGATGAAATTGCTGTGTGTAACCTGGCCTCGATTGCCTTAAACATGTTTGTGAAACCC 17620 Query 364324 GATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTC 364383 ||| |||| | ||| | | || | || ||| || | || |||| ||||| Sbjct 17619 GATCGTACATATGATTTCGCAAAGCTAAAGGAAGTAGCCAAAACTGTTACTAAGAATCTT 17560 Query 364384 GACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGT 364443 |||| | ||||| | ||||||||||| |||| ||||| |||| || |||||||| Sbjct 17559 AACAAAATCATCGATATAAATTATTATCCTGTTCCGGAAGCAAAGCGATCCAATATGCGC 17500 Query 364444 CATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTAT 364490 || || ||||| || | || || || ||| | || || | ||| || Sbjct 17499 CACCGTCCGATAGGGATCGGAGTGCAAGGCATGGCAGATGCTTTCAT 17453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303316527736040