Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq1047 430 2e-115
>seq1047
Length=31309
Score = 430 bits (476), Expect = 2e-115
Identities = 1228/1872 (66%), Gaps = 32/1872 (2%)
Strand=Plus/Plus
Query 61841 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 61900
||||| | |||||| ||||| | | || ||||| ||||||| ||| ||||| ||
Sbjct 16730 TTGTCAACTGTGAACTGAATCGCATTAACAGCTGGTTTGGTACGTAAATAATACATCCCG 16789
Query 61901 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA 61960
||||| || || | |||| ||||| ||||| || |||||||| || | ||
Sbjct 16790 GTTTTAAGGCCCATCTTCCAGCCGTAGAAATGAATTGATGTTAGTTTACCGTAGTTTGGC 16849
Query 61961 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 62020
|| |||| || ||||| | ||| || ||| || ||||| ||||| | ||| || |||
Sbjct 16850 TCAGCTACGTGAATATTGAAAGACTGCGATTGGTCAATGAATGCTCCTCGGTCGGCCGCC 16909
Query 62021 ATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATC 62079
||||| || || || | ||| ||||| | ||||| || | | || | | |
Sbjct 16910 ATTTTGATGCAAGTTTTCACAGAAATCTCCCAGACCGTTTTGTACAGATTGCGGA-TGTG 16968
Query 62080 TTCTGGAAGGTT---TGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGAT 62136
|| |||| | | | || || || || ||| | |||| |||| | ||||| ||
Sbjct 16969 TTGCGGAATTTCCTCTATCTTTTGTATTGAGCCATTTTGGGCCAGAATCTTGTTCTTCAT 17028
Query 62137 CTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTG 62196
||||| | ||| | || || |||| | || | || | ||| |||| ||||||||
Sbjct 17029 TTCATCGTCCCACAGTTCCAATTCAGTTAGATCTTTTAGCAAATGATGATTCACTACTTG 17088
Query 62197 AAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTC 62256
||| || ||||| | ||| || ||| |||| | ||| || || ||||| | ||| ||
Sbjct 17089 AAACTCGCCAGAAAGTACCCTACGATTGTAGACATTTGAAGTGTATGGTTCAAAAGATTC 17148
Query 62257 ATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATT 62316
|| || || | ||||| ||||| || || ||||||||||| || | | | |||
Sbjct 17149 GTTGTTACCGAGTATTTGCGCAGTCGACGCGGTCGGCATAGGCGCTAAAAGCAGGGAATT 17208
Query 62317 TCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTT--CCCAATTCCAAAGATCCGAC 62374
| | || | ||| || || ||||||| || | |||||| ||| | ||||
Sbjct 17209 GCGCACGCCATGTGTCACAATATT-TCTTTTA-AGCTCAGCCCAATCCCACAATTCCGTA 17266
Query 62375 GG-TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACAT 62432
|| | | | | | || || || || || | | || ||| |||
Sbjct 17267 GGCTTCTTCTCCCACATGTCGTACT-GAAGGATTCCTTTGCTAACTGGACT-TCCATCAT 17324
Query 62433 ATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAAT 62492
||| |||||||| || |||| | || | ||| || ||||| || | || ||| | |
Sbjct 17325 ATGATTCGTATGGACCATCCTGTGCGGCCAATTCGCAGCTCGCTTCAAGGGCTCCGAAGT 17384
Query 62493 AAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAAT 62552
|||||||||| || || | | ||| | || ||||| || || | || |
Sbjct 17385 AAATGGTTTCAAACATTTGTTGATTCAACAGCTGGGCTTCTTCACTTTCGTAAGGGTGGC 17444
Query 62553 TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCT 62612
| | || || || ||||| | ||||| || || || || || || | || | |
Sbjct 17445 GCATCAAGATGAAAGCATCTGCCATGCCTTGCACTCCGATCCCTATCGGACGGTGGCGCA 17504
Query 62613 TATTAGA--GATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 62670
|||| || | ||| ||||| |||| |||||||||||| ||||| || ||||| || ||
Sbjct 17505 TATTGGATCGCTTT--GCTTCCGGAACAGGATAATAATTTATATCGATGATTTTGTTAAG 17562
Query 62671 ATTTCTGACAATTACTTTGACCACATCCTTCAG-TTTGAGAAAATCAAATCGCCCATC-- 62727
||| | || |||| | || ||||| || |||| |||| ||| || | |||
Sbjct 17563 ATTCTTAGTAACAGTTTTGGCTACTTCCTTTAGCTTTGCGAAA-TCATATGTACGATCGG 17621
Query 62728 -TATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCAT 62786
| | ||||||||||| || |||| || ||||| ||||| || || | |||| | |
Sbjct 17622 GTTTCACAAACATGTTTAAGGCAATCGAGGCCAGGTTACACACAGCAATTTCAT---CTT 17678
Query 62787 CCGCA---TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTT 62843
| | |||| || || || ||||| || || ||||||||| ||||| | |||||
Sbjct 17679 TTGAAGAGTATTCTACAATTTCGGTGCACAGGTTTGAACACTTGATCGTTCCGATATTTT 17738
Query 62844 GTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAA 62903
| || |||||||| || |||||||| || ||||| ||| | || ||||||||||
Sbjct 17739 GCTGGTTACTCTTACGATTGCACGCATCTTTGTAAAGCATGTAAGGCACTCCAGTTTCAA 17798
Query 62904 TCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCT 62963
||| ||||||||||| || ||| | || | ||||||| | | || | |
Sbjct 17799 CCTGTGATTCTATAATTGCGAACCATAAATCTTGTGCCTTTACTTGACGGGTGAAACGAC 17858
Query 62964 TTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTC 63023
|| | ||||| || || | | ||||||||| || ||||| | || ||
Sbjct 17859 CCTCGCGCTCGTAGCCAGTGTAGAGTTTTTCGAACTCCTCACCCCATGTCTCCGACAATC 17918
Query 63024 CAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAA 63083
||||||| || | || ||||| | |||| | ||| | | ||| || | ||| |
Sbjct 17919 CAGGACAGTCGTGAGGGCACATTAGACTCCACATTTCGTTGGCTTCCACACGCTGCATGA 17978
Query 63084 AGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTG 63143
| | |||||||||||| || || || | || || | | || || || || |
Sbjct 17979 ACAAATCAGGAATCCACAGCGCGTAGAACATGTCCCTTGCGCGGACCTCTTCTTTGCCAG 18038
Query 63144 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 63203
| |||||||| ||||| | ||| | | | ||| |||||| || |||| || || |
Sbjct 18039 TGTTCTTTTTTAGATCCAAAAACTCAAATACATCCCCATGCCATGGCTCCAGATAGATAG 18098
Query 63204 CCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 63263
| | |||| || || ||||| ||||| || || | || | || || ||||| || |
Sbjct 18099 CAAAGGCTCCGGGTCGCTTGTTACCTCCTTGGTCAACATAACGTGCAGTATTATTGTAGA 18158
Query 63264 CTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCAC 63323
| | || ||| || | | ||| || || ||||||| || |||| ||||| ||||
Sbjct 18159 CGCGCAGCATCGGTACTAAACCGTTCGAAATACCATTCGTTCCTGCAATATATGTTCCTT 18218
Query 63324 TGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 63381
| || | ||| | | ||| | | ||||| || || ||| ||||||||| || ||
Sbjct 18219 TCGCCCTAATGCAGTGTACATTCA--GGCCTATGCCACCAGCCGATTTAGAGATCAAGGC 18276
Query 63382 GCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 63441
|| |||| | ||||| || || ||||| || ||||| ||| ||| | || || ||
Sbjct 18277 ACACTGTTTAAGAGTATCGTAAATTCCCTCGATGCTATCGTCCGACATTGTGAGCAGGAA 18336
Query 63442 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGT 63501
||| |||| ||| | || |||| | ||| ||| | ||| || |||||||| ||
Sbjct 18337 GCAGGACGACAGTTGCGGCCGTTGAGTTGCTGCAGCAAACATGGTTGGCGAAGCGTGCGT 18396
Query 63502 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATG 63561
||| || || || || | |||||||||||| || || || || ||||| |||
Sbjct 18397 AAAGTATCGCTCTGACAGCAAATTGTACGTCTCGATGGCAGAATCAATATCTTCACCATG 18456
Query 63562 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTAT 63621
|| || | || |||||||| | |||||| || || || || || ||||| || ||
Sbjct 18457 TATGCCGATAGCAACACGCATGAGCATGTGTTGCGGCCTCTCCACAATCTTCCCCTTAAT 18516
Query 63622 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 63681
||| |||| || ||| ||||||| ||||| |||||||| || ||||| |||||| ||
Sbjct 18517 TTTTAACAGATATGATCTTTCCAATGTTTTGAAACCAAAGTAATTGTAACCAAAGTCACG 18576
Query 63682 TTCGTAAATAAT 63693
||||| || ||
Sbjct 18577 GTCGTAGATGAT 18588
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633614416712000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |