Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1047 430 2e-115 >seq1047 Length=31309 Score = 430 bits (476), Expect = 2e-115 Identities = 1228/1872 (66%), Gaps = 32/1872 (2%) Strand=Plus/Plus Query 61841 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 61900 ||||| | |||||| ||||| | | || ||||| ||||||| ||| ||||| || Sbjct 16730 TTGTCAACTGTGAACTGAATCGCATTAACAGCTGGTTTGGTACGTAAATAATACATCCCG 16789 Query 61901 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA 61960 ||||| || || | |||| ||||| ||||| || |||||||| || | || Sbjct 16790 GTTTTAAGGCCCATCTTCCAGCCGTAGAAATGAATTGATGTTAGTTTACCGTAGTTTGGC 16849 Query 61961 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 62020 || |||| || ||||| | ||| || ||| || ||||| ||||| | ||| || ||| Sbjct 16850 TCAGCTACGTGAATATTGAAAGACTGCGATTGGTCAATGAATGCTCCTCGGTCGGCCGCC 16909 Query 62021 ATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATC 62079 ||||| || || || | ||| ||||| | ||||| || | | || | | | Sbjct 16910 ATTTTGATGCAAGTTTTCACAGAAATCTCCCAGACCGTTTTGTACAGATTGCGGA-TGTG 16968 Query 62080 TTCTGGAAGGTT---TGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGAT 62136 || |||| | | | || || || || ||| | |||| |||| | ||||| || Sbjct 16969 TTGCGGAATTTCCTCTATCTTTTGTATTGAGCCATTTTGGGCCAGAATCTTGTTCTTCAT 17028 Query 62137 CTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTG 62196 ||||| | ||| | || || |||| | || | || | ||| |||| |||||||| Sbjct 17029 TTCATCGTCCCACAGTTCCAATTCAGTTAGATCTTTTAGCAAATGATGATTCACTACTTG 17088 Query 62197 AAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTC 62256 ||| || ||||| | ||| || ||| |||| | ||| || || ||||| | ||| || Sbjct 17089 AAACTCGCCAGAAAGTACCCTACGATTGTAGACATTTGAAGTGTATGGTTCAAAAGATTC 17148 Query 62257 ATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATT 62316 || || || | ||||| ||||| || || ||||||||||| || | | | ||| Sbjct 17149 GTTGTTACCGAGTATTTGCGCAGTCGACGCGGTCGGCATAGGCGCTAAAAGCAGGGAATT 17208 Query 62317 TCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTT--CCCAATTCCAAAGATCCGAC 62374 | | || | ||| || || ||||||| || | |||||| ||| | |||| Sbjct 17209 GCGCACGCCATGTGTCACAATATT-TCTTTTA-AGCTCAGCCCAATCCCACAATTCCGTA 17266 Query 62375 GG-TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACAT 62432 || | | | | | || || || || || | | || ||| ||| Sbjct 17267 GGCTTCTTCTCCCACATGTCGTACT-GAAGGATTCCTTTGCTAACTGGACT-TCCATCAT 17324 Query 62433 ATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAAT 62492 ||| |||||||| || |||| | || | ||| || ||||| || | || ||| | | Sbjct 17325 ATGATTCGTATGGACCATCCTGTGCGGCCAATTCGCAGCTCGCTTCAAGGGCTCCGAAGT 17384 Query 62493 AAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAAT 62552 |||||||||| || || | | ||| | || ||||| || || | || | Sbjct 17385 AAATGGTTTCAAACATTTGTTGATTCAACAGCTGGGCTTCTTCACTTTCGTAAGGGTGGC 17444 Query 62553 TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCT 62612 | | || || || ||||| | ||||| || || || || || || | || | | Sbjct 17445 GCATCAAGATGAAAGCATCTGCCATGCCTTGCACTCCGATCCCTATCGGACGGTGGCGCA 17504 Query 62613 TATTAGA--GATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 62670 |||| || | ||| ||||| |||| |||||||||||| ||||| || ||||| || || Sbjct 17505 TATTGGATCGCTTT--GCTTCCGGAACAGGATAATAATTTATATCGATGATTTTGTTAAG 17562 Query 62671 ATTTCTGACAATTACTTTGACCACATCCTTCAG-TTTGAGAAAATCAAATCGCCCATC-- 62727 ||| | || |||| | || ||||| || |||| |||| ||| || | ||| Sbjct 17563 ATTCTTAGTAACAGTTTTGGCTACTTCCTTTAGCTTTGCGAAA-TCATATGTACGATCGG 17621 Query 62728 -TATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCAT 62786 | | ||||||||||| || |||| || ||||| ||||| || || | |||| | | Sbjct 17622 GTTTCACAAACATGTTTAAGGCAATCGAGGCCAGGTTACACACAGCAATTTCAT---CTT 17678 Query 62787 CCGCA---TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTT 62843 | | |||| || || || ||||| || || ||||||||| ||||| | ||||| Sbjct 17679 TTGAAGAGTATTCTACAATTTCGGTGCACAGGTTTGAACACTTGATCGTTCCGATATTTT 17738 Query 62844 GTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAA 62903 | || |||||||| || |||||||| || ||||| ||| | || |||||||||| Sbjct 17739 GCTGGTTACTCTTACGATTGCACGCATCTTTGTAAAGCATGTAAGGCACTCCAGTTTCAA 17798 Query 62904 TCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCT 62963 ||| ||||||||||| || ||| | || | ||||||| | | || | | Sbjct 17799 CCTGTGATTCTATAATTGCGAACCATAAATCTTGTGCCTTTACTTGACGGGTGAAACGAC 17858 Query 62964 TTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTC 63023 || | ||||| || || | | ||||||||| || ||||| | || || Sbjct 17859 CCTCGCGCTCGTAGCCAGTGTAGAGTTTTTCGAACTCCTCACCCCATGTCTCCGACAATC 17918 Query 63024 CAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAA 63083 ||||||| || | || ||||| | |||| | ||| | | ||| || | ||| | Sbjct 17919 CAGGACAGTCGTGAGGGCACATTAGACTCCACATTTCGTTGGCTTCCACACGCTGCATGA 17978 Query 63084 AGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTG 63143 | | |||||||||||| || || || | || || | | || || || || | Sbjct 17979 ACAAATCAGGAATCCACAGCGCGTAGAACATGTCCCTTGCGCGGACCTCTTCTTTGCCAG 18038 Query 63144 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 63203 | |||||||| ||||| | ||| | | | ||| |||||| || |||| || || | Sbjct 18039 TGTTCTTTTTTAGATCCAAAAACTCAAATACATCCCCATGCCATGGCTCCAGATAGATAG 18098 Query 63204 CCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 63263 | | |||| || || ||||| ||||| || || | || | || || ||||| || | Sbjct 18099 CAAAGGCTCCGGGTCGCTTGTTACCTCCTTGGTCAACATAACGTGCAGTATTATTGTAGA 18158 Query 63264 CTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCAC 63323 | | || ||| || | | ||| || || ||||||| || |||| ||||| |||| Sbjct 18159 CGCGCAGCATCGGTACTAAACCGTTCGAAATACCATTCGTTCCTGCAATATATGTTCCTT 18218 Query 63324 TGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 63381 | || | ||| | | ||| | | ||||| || || ||| ||||||||| || || Sbjct 18219 TCGCCCTAATGCAGTGTACATTCA--GGCCTATGCCACCAGCCGATTTAGAGATCAAGGC 18276 Query 63382 GCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 63441 || |||| | ||||| || || ||||| || ||||| ||| ||| | || || || Sbjct 18277 ACACTGTTTAAGAGTATCGTAAATTCCCTCGATGCTATCGTCCGACATTGTGAGCAGGAA 18336 Query 63442 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGT 63501 ||| |||| ||| | || |||| | ||| ||| | ||| || |||||||| || Sbjct 18337 GCAGGACGACAGTTGCGGCCGTTGAGTTGCTGCAGCAAACATGGTTGGCGAAGCGTGCGT 18396 Query 63502 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATG 63561 ||| || || || || | |||||||||||| || || || || ||||| ||| Sbjct 18397 AAAGTATCGCTCTGACAGCAAATTGTACGTCTCGATGGCAGAATCAATATCTTCACCATG 18456 Query 63562 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTAT 63621 || || | || |||||||| | |||||| || || || || || ||||| || || Sbjct 18457 TATGCCGATAGCAACACGCATGAGCATGTGTTGCGGCCTCTCCACAATCTTCCCCTTAAT 18516 Query 63622 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 63681 ||| |||| || ||| ||||||| ||||| |||||||| || ||||| |||||| || Sbjct 18517 TTTTAACAGATATGATCTTTCCAATGTTTTGAAACCAAAGTAATTGTAACCAAAGTCACG 18576 Query 63682 TTCGTAAATAAT 63693 ||||| || || Sbjct 18577 GTCGTAGATGAT 18588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633614416712000