Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq14 170 2e-37 seq748 111 2e-19 >seq14 Length=264275 Score = 170 bits (188), Expect = 2e-37 Identities = 306/447 (68%), Gaps = 0/447 (0%) Strand=Plus/Plus Query 92896 CTTTTCACCGATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACAT 92955 ||| |||| | |||||| ||| | | ||| || || || || |||||||| ||||| Sbjct 132101 CTTCTCACAGCCCAACTCCACCAACAGACGATCCGCCACGAACTCGATGTACTGCGACAT 132160 Query 92956 CAAATCACAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTC 93015 | || |||||||| || | | | ||||| || || | |||| ||| || | ||| Sbjct 132161 GAGCTCGCAATTCATACCCAACATATCGACAGGCAGTGCTTTCGTCAGGAACTCCTGCTC 132220 Query 93016 GATTACAACGGCTTCTTTCAAGATTTCTATTACTCTACTATTTGGTGGTTTTTGTACGAC 93075 ||| | || || || | ||| || |||| | | | |||||| ||||| | Sbjct 132221 GATCATGACTGCATCACGGATGATATCCGTTACGCGTTTGCGCGATGGTTTCTGTACCAG 132280 Query 93076 ATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTC 93135 ||| ||| |||| | || ||||||||| |||||||||||| || || || |||| ||| Sbjct 132281 ATACTTGAACATGAGACAGGCAAAGTCGCAATGTAAACCTTCATCGCGCGAGATCAGCTC 132340 Query 93136 ATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAA 93195 ||| ||| || | ||| || | ||| || || ||||| ||||| || || | |||||| Sbjct 132341 GTTGGAGAACGTCAGACCCGGCATCAGGCCACGCTTCTTTAGCCAGAAGATGGCAGCAAA 132400 Query 93196 ACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATT 93255 || ||| || || ||||| || |||||||| || ||||| ||||| ||| | | || Sbjct 132401 GCTGCCACTGAAGAAGATACCCTCGACGGCTGCGAACGCCACGATACGCTCGCCGTAGTT 132460 Query 93256 TGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAG 93315 || || || |||||| || | ||||| || || || ||| | || || || Sbjct 132461 AGCCTTCTTGCTCGAGATCCAGTTCATCGCCCAGTCCGCCTTACGCTTCACGCACGGCAG 132520 Query 93316 TGTTTCGATAGCGTTAAATAGGTAATC 93342 || ||||| || || || ||| |||| Sbjct 132521 CGTCTCGATGGCATTGAACAGGAAATC 132547 >seq748 Length=88790 Score = 111 bits (122), Expect = 2e-19 Identities = 76/85 (89%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||| |||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 144 AGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTAAGGGAGC 85 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||| |||||| Sbjct 84 GTGGGTTCGAACCCCACTTCTGACA 60 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556845347112800