Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1047 149 5e-31 seq111 107 2e-18 seq673 105 6e-18 seq122 98.7 8e-16 seq966 84.2 2e-11 >seq1047 Length=31309 Score = 149 bits (164), Expect = 5e-31 Identities = 1182/1884 (63%), Gaps = 76/1884 (4%) Strand=Plus/Plus Query 128775 CGACTTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACAT 128834 ||| ||||| || || || | ||| || | | || || ||||| || ||||| ||||| Sbjct 16726 CGATTTGTCAACTGTGAACTGAATCGCATTAACAGCTGGTTTGGTACGTAAATAATACAT 16785 Query 128835 GCCTGTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGT 128894 || ||||| | || | ||||| || | ||||| | || | ||||| | Sbjct 16786 CCCGGTTTTAAGGCCCATCTTCCAGCCGTAGAAATGAATTGATGTTAGTTTACCGTAGTT 16845 Query 128895 GGGTTGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGC 128954 || | | | |||||| || || || ||| ||||| || | || || ||||| Sbjct 16846 TGGCTCAGCTACGTGAATATTGAAAGACTGCGATTGGTCAATGAATGCTCCTCGGTCGGC 16905 Query 128955 AGCCATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTCAC 129014 ||||| || || ||||||| || ||||| ||||||||||| || | | | Sbjct 16906 CGCCATTTTGATGCAAGTTTTCACAGAAATCTCCCAGACCGTTTTGTACAGATTGCGGAT 16965 Query 129015 GTGTTTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTTTCG 129074 ||||| || ||||| || || || || | ||| || | || | ||| ||||| Sbjct 16966 GTGTTGCGGAATTTCCTCTATCTTTTGTATTGAGCCATTTTGGGCCAGAATCTTGTTCTT 17025 Query 129075 CATCTGTTCGTTGTACA-----AATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTTT 129129 ||| | |||| ||| ||||||||| |||| | | ||| | | || Sbjct 17026 CATTTCATCGTCCCACAGTTCCAATTCAGTTAGATCTTTTAG-----CAAATGATGATTC 17080 Query 129130 ATTACTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCA 129189 | ||||||||| || || | | || | ||| ||| | || ||| | || ||| Sbjct 17081 ACTACTTGAAACTCGCCAGAAAGTACCCTACGATTGTAGACATTTGAAGTGTATGGTTCA 17140 Query 129190 AACGATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCACGCAA 129249 || ||||| ||||| || | |||||| || || | |||||| ||||| || | | || Sbjct 17141 AAAGATTCGTTGTTACCGAGTATTTGCGCAGTCGACGCGGTCGGCAT---AGGCGCTAAA 17197 Query 129250 AGC---GAGTTTCGCAAACCGTGCTGTTT-AATGTCtttttttAATTGTGTCCAGTCCCA 129305 ||| || || |||| || || ||| ||| | | |||| | | | ||| ||||| Sbjct 17198 AGCAGGGAATTGCGCACGCCATG-TGTCACAATATTTCTTTTAAGCTCAGCCCAATCCCA 17256 Query 129306 CATCGATGTGGGTGTGTGATTCCACAAGTCGTATTGCAATATACCCAAACTGGCGGGACT 129365 || || || | | | ||||| |||||| || | || || || | ||||| Sbjct 17257 CAATTCCGTAGGCTTCTTCTCCCACATGTCGTACTGAAGGATTCCTTTGCTAACTGGACT 17316 Query 129366 GGAAAAGTAGGAATCGTGCACGCCGTAAGCTTTTGCCAATTCGCAACTCGCTTCCAATGC 129425 | || || |||| || | | ||||||||||| |||||||| | || Sbjct 17317 TCCATCATATGATTCGTATGGACCATCCTGTGCGGCCAATTCGCAGCTCGCTTCAAGGGC 17376 Query 129426 GCCAAAATAAATTGTTTCGGCAATTTTGGTG-TTCAACACTTTGGCCTGGTCGCTTTCGT 129484 || || ||||| ||||| | |||| || ||||||| | ||| | || ||||||| Sbjct 17377 TCCGAAGTAAATGGTTTC-AAACATTTGTTGATTCAACAGCTGGGCTTCTTCACTTTCGT 17435 Query 129485 ACGGCATACGCAACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACCGATGGGTC 129544 | || |||| || | || | || |||| ||||| | || | || || || | Sbjct 17436 AAGGGTGGCGCATCAAGATGAAAGCATCTGCCATGCCTTGCACTCCGATCCCTATCGGAC 17495 Query 129545 GATGTTTTCTATTGGAT---TTTTGTGCCGACAACAAGGGATAGTAGTTGATGTCTATAA 129601 | || |||||||| ||| | ||| |||| ||||| || || || || || | Sbjct 17496 GGTGGCGCATATTGGATCGCTTTGCTTCCG-GAACA--GGATAATAATTTATATCGATGA 17552 Query 129602 TTTTGTTTAAATTCTTGACCACAATTTTCGTTACGTATTTTAACATTTCAAAATTGTACT 129661 ||||||| | |||||| ||| |||| | ||| | |||| | || | |||| || Sbjct 17553 TTTTGTTAAGATTCTTAGTAACAGTTTTGGCTACTTCCTTTAGCTTTGCGAAATCATA-- 17610 Query 129662 CGCCTAC-ATCGATGTCGACAAA-TTGATTGACACAAATCGAGGCCAAATTGCAGACGGC 129719 ||| |||| | ||||| || || | | ||||||||||| || || || || Sbjct 17611 --TGTACGATCGGGTTTCACAAACATGTTTAAGGC-AATCGAGGCCAGGTTACACACAGC 17667 Query 129720 ACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGT 129779 | |||| | ||| | ||| || |||||||||| ||||| || | || || || Sbjct 17668 AATTTCATCTTTTGAAGAGTATTCTACAATTTCGGTGCACAGGTTTGAACACTTGATCGT 17727 Query 129780 GCCCAAATGCTTTTGATTACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGT 129839 || | || | || ||||| || ||||| ||||||||||| | |||||| ||| Sbjct 17728 TCCGATATTTTGCTGGTTACTCTTACGATTGCACGCATCTTTGTAAAGCATGTAAGGCAC 17787 Query 129840 GCCCGTTTCGACTTGCGTTTCGACAATGGTCCTGAAC---AAGTCTCGAGCCTTGATCTG 129896 || ||||| || || | ||| | ||| | |||| || ||| | ||||| | || Sbjct 17788 TCCAGTTTCAACCTGTGATTCTATAATTG---CGAACCATAAATCTTGTGCCTTTACTTG 17844 Query 129897 TCTTACAAATTTGCCACATTTCTCGTATGCCA-CATACAGTTGTTC-AAATTCTGA-GCC 129953 | || || |||||| |||| || |||| ||| || | || | || Sbjct 17845 ACGGGTGAAACGACCCTCGCGCTCGTA-GCCAGTGTAGAGTTTTTCGAACTCCTCACCCC 17903 Query 129954 GTGTACGGTGTCGAGCAACGGCGATTCACGCGGACACATCAAACTCCACATTCCATCCGC 130013 ||| | | | | | | || | || | || ||||| | |||||||||| | | || Sbjct 17904 ATGT-CTCCGACAATCCA-GGACAGTCGTGAGGGCACATTAGACTCCACATTTCGTTGGC 17961 Query 130014 TTCGACTCGTTTCATAAACAAATCGGGTACCCACAGGGCGTACAACAAAT--CTCGCGCT 130071 ||| || || | ||| |||||||| || | |||||| ||||| |||| | || |||| Sbjct 17962 TTCCACACGCTGCATGAACAAATCAGGAATCCACAGCGCGTAGAACATGTCCCTTGCGCG 18021 Query 130072 TTTCTATCCTCGGCACCCATGTTACGTTTCAGTTCAAGGAAATCGTAAATGTCGGCGTGC 130131 || | || | || |||| ||| || || | || || | | || | ||| Sbjct 18022 GACCTCTTCTTTG--CCAGTGTTCTTTTTTAGATCCAAAAACTCAAATACATCCCCATGC 18079 Query 130132 CACGGTTCAACATAAATTGCCATTGCGCCCTTCCGTTTG---CCCCCTTGGTCAACGTGG 130188 || || || | ||| || || | || || || ||| || ||||||||||| | Sbjct 18080 CATGGCTCCAGATAGATAGCAAAGGCTCCGGGTCGCTTGTTACCTCCTTGGTCAACATAA 18139 Query 130189 CGCACGGCATTGTTGTAGACTCGCAACATTGCCTCCAATCCGTTGGCCGTGCCGTTTGTG 130248 || | | ||| |||||||| |||| ||| | | || ||||| | | || || || Sbjct 18140 CGTGCAGTATTATTGTAGACGCGCAGCATCGGTACTAAACCGTTCGAAATACCATTCGTT 18199 Query 130249 CTCTCAATGAAACTGCCACGAGCCCGAACGTTATGAACGCTTAGACCTATGCCGCCGCCA 130308 | |||| | | || |||| || | || || | || |||||||| || | Sbjct 18200 CCTGCAATATATGTTCCTTTCGCCCTAATGCAGTGTACATTCAGGCCTATGCCACCAGCC 18259 Query 130309 AATTTTGATATCAACGCGCAATCGCGTAGCGTTTCATAAATGCCAACGATACTGTCTTCT 130368 |||| || ||||| || || | || || || ||||| || |||| || || || Sbjct 18260 GATTTAGAGATCAAGGCACACTGTTTAAGAGTATCGTAAATTCCCTCGATGCTATCGTCC 18319 Query 130369 TTAATGTTTAGGAGGAAACACGAGGCCAATT--GGGCGTAACATGATCCGCTG--GCAAA 130424 || | || ||||| || || | || || || ||| ||| |||| ||||| Sbjct 18320 GACATTGTGAGCAGGAAGCAGGACGACAGTTGCGGCCGT----TGAGTTGCTGCAGCAAA 18375 Query 130425 CAAAGTTGGACTTGCATGTGTATACATTTTGTGTGCCATCAAATTGTACGTTTCAAAAAC 130484 || ||||| || || ||| | | | || || |||||||||||| || | | Sbjct 18376 CATGGTTGGCGAAGCGTGCGTAAAGTATCGCTCTGACAGCAAATTGTACGTCTCGATGGC 18435 Query 130485 GTTTTCAATGCAATCGTCGGTGTCGTTGCCGTGTATGGTTAGAGCCACACGCATGTACAT 130544 ||||| ||| || || |||||| | ||| ||||||||| ||| Sbjct 18436 AGAATCAAT---ATCTTC---------ACCATGTATGCCGATAGCAACACGCATGAGCAT 18483 Query 130545 ATGTTGAATGCGCTCCGCCACTTTCCCCTCAATCGTTTTCA-AGTAACCAT-TTTCGAGA 130602 ||||| | |||| | | ||||||| ||| |||| | || | || |||| | Sbjct 18484 GTGTTGCGGCCTCTCCACAATCTTCCCCTTAAT--TTTTAACAGATATGATCTTTCCAAT 18541 Query 130603 GTTTTAAATCCAAAATATTTGTAA 130626 ||||| || ||||| || |||||| Sbjct 18542 GTTTTGAAACCAAAGTAATTGTAA 18565 >seq111 Length=461598 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || || || ||||| | || ||||| || |||| ||||| || || || | Sbjct 359879 GATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATCACCCTTGAGGTCGAGCCCTC 359820 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||||| | || || | || || || || ||||||||||| ||||| || ||||| Sbjct 359819 GGATACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCGCCGGATCA 359760 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || |||||||| || || ||||| ||| | || || || || | ||||| ||||| Sbjct 359759 GCAGCGTCTTATCTTCGCTGGCAAGCAGCTGGAAGACGGACGTACTCTGTCCGACTACAA 359700 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || ||||| || | ||| | || |||| |||| || ||| Sbjct 359699 TATTCAGAAGGAATCGACGCTTCATCTGGTGCTGCGCCTGCGTGGTGGT 359651 >seq673 Length=25255 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| ||||| || ||||| | ||||| || || |||| || || || || | Sbjct 24642 AAAATGCAGATTTTCGTGAAAACGCTCACCGGCAAGACCATCACACTCGAGGTCGAGCCA 24583 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || ||| | || || | || || || || ||||||||||| || || || ||| Sbjct 24582 TCGGACACCATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCCCCAGAT 24523 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || ||||| || || |||||||| ||| | ||||| ||| ||| | || || ||| Sbjct 24522 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGTACCCTTTCGGACTAC 24463 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || || || ||| | ||| | || ||||| | || || ||| Sbjct 24462 AACATCCAGAAGGAGTCGACCCTGCATCTTGTGCTGCGACTTCGTGGTGGT 24412 >seq122 Length=254344 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || || || || ||| ||||||| || ||||| | | Sbjct 68678 ATGCAGATCTTCGTGAAGACGTTGACTGGCAAGACGATCACTCTGGAGGTGGAGCCTTCG 68619 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || | |||| || || || ||||||||||| ||||| || ||||| Sbjct 68618 GATACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 68559 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || || |||||||| ||| | || || || ||| | ||||| || ||| Sbjct 68558 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAAGACGGACGTACCCTGTCCGACTATAAC 68499 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || || ||| | || || || | || |||| || || Sbjct 68498 ATCCAGAAGGAGTCGACCCTGCACTTGGTCCTCCGTCTGCGTGGTGG 68452 >seq966 Length=353950 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22225 ATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACC 22284 ||||| || || || | || || || || ||||||| || || || | ||||||| Sbjct 2 ATTTTCGTGAAGACCCTGACAGGAAAGACCATCACTCTGGAGGTCGAGCCATCCGATACG 61 Query 22285 GTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGT 22344 | || | | || || ||||| || ||||| || || || || ||||| || ||| Sbjct 62 ATTGAGAACGTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCCAGATCAGCAGCGT 121 Query 22345 CTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAA 22404 ||||| || || || || ||| | |||||| || || | ||||| ||||||||||| Sbjct 122 CTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGTACTCTGTCCGACTACAACATTCAG 181 Query 22405 AAAGAATCCAC 22415 || ||||| || Sbjct 182 AAGGAATCGAC 192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419716643734300