Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq372 194 3e-44
seq966 161 2e-34
seq610 161 2e-34
seq122 161 2e-34
seq111 149 1e-30
seq673 141 2e-28
seq14 86.0 1e-11
>seq372
Length=50997
Score = 194 bits (214), Expect = 3e-44
Identities = 401/589 (68%), Gaps = 16/589 (3%)
Strand=Plus/Minus
Query 268211 CCAGTTGCAATCACAAAGTCCTCTGG---CTCAGGAGACTGGAGCATTTTCCACATTGCT 268267
|| || ||||| |||||||| || || ||| | ||| | ||| |||||| ||
Sbjct 40104 CCGGTGGCAATGACAAAGTCTTCCGGTTTCTCCTG---CTGCATCATCAGCCACATCGCC 40048
Query 268268 TCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGG 268327
|| ||||||||| ||| || ||||| || ||||| | || | || || || | |
Sbjct 40047 TCCACATAGTCCTTCGCGTGACCCCAGTCTCGCTTGGAATCGAGATTACCCAGCTCGACG 39988
Query 268328 CATTTCTGCTTGCCGAGCTTCACGCGTGCAAGACCG--CGAGTGATTTTTCGGGTCACGA 268385
|||| ||||| |||||| | || ||||| |||||||| || |||||||| |
Sbjct 39987 CATTCCTGCTGCCCGAGCGATATCTTCGC--GACCGAACGAGTGATCTTACGGGTCACAA 39930
Query 268386 ACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGC 268445
| |||| || ||| | || || |||||||| || || |||||||| || |||||
Sbjct 39929 AATTCTCTCCGCGTCGGGGCGATTCATGGTTGAACAGAATCCCGTTGCAGGCAAACATAT 39870
Query 268446 CATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGTACG 268505
| || ||||| ||||| || | || |||||||| | ||||||| ||| ||| ||||
Sbjct 39869 CGTACGCCTCGCGGTAATTGATCACGATCCAGTATCCGTACATCTTGGCACATGCATACG 39810
Query 268506 GAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATTTCTCGG--ACTTTGCCAAA 268563
| || || |||| |||||| || | || || || | ||||| |||||||| |
Sbjct 39809 GCGAGCGGGGATAGAAGGGAGTTTTCTCGTTCTGGGG--TGTCTCGACCACTTTGCCGTA 39752
Query 268564 GAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCGAGACCGCAGATTCGGAT 268623
||||||||||| |||||||||||||| | | ||| || || || |||| ||
Sbjct 39751 CAGCTCGGAGGTGGATGCTTGGTAGAAGCGTACCGCTTTCTCCAGCCCCACCGTTCGAAT 39692
Query 268624 TGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGCTGTATACTCCGGCATCTC 268683
|| || |||| || | || || | | ||||||| ||||| || ||||| | ||
Sbjct 39691 GGCATCCAGCAGCCGCAACGTACCGACGGCATCCACTTCCGCCGTGTACTCGCTGAGATC 39632
Query 268684 GAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAACCTCATCCGGTTTGACCTG 268743
||| || | || || |||||||| ||| ||| || || | || || | |||
Sbjct 39631 GAAAGAAATCTTCACGTGGCTCTGTGCGGCCAAATTGTAGATTTC-CGTGGGCCGCACTG 39573
Query 268744 CTGC-ACGATCTTCACGAGGTTCGTTGAGTCGGTGAGGTCTCCGTAGTG 268791
|||| | ||||||||| ||| | |||||| | ||| ||||||||
Sbjct 39572 CTGCGATGATCTTCACCAGGGCGCTACTGTCGGTCATGTCCCCGTAGTG 39524
>seq966
Length=353950
Score = 161 bits (178), Expect = 2e-34
Identities = 173/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293
||| || ||||| || | || | || || || || || ||||||||||| || |||||
Sbjct 451 TCCCCCACGAAGACGGAGCACTAGATGGAGAGTCGATTCCTTTTGGATGTTGTAGTCGGA 392
Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353
|| || | ||||| || | |||||| || ||||| || || | || || || || ||
Sbjct 391 CAGCGTACGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGG 332
Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413
|||||||||||| || |||||||| ||||| ||| ||| || || || | || || ||
Sbjct 331 AATGCCTTCCTTATCCTGAATCTTAGCCTTCACGTTCTCAATTGTATCGGATGGCTCGAC 272
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|||| ||||||||| ||||| || |||||||| ||||| |||||||||
Sbjct 271 CTCCAGGGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCATT 223
Score = 143 bits (158), Expect = 5e-29
Identities = 166/224 (74%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
||||||| ||||| || | |||| || || || || || || || ||||| || ||||
Sbjct 224 TTCCTCCACGAAGACGGAGCACCAGATGGAGAGTCGATTCCTTCTGAATGTTGTAGTCGG 165
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
| || || | ||||| || | |||||| || ||||| || || | || || || || |
Sbjct 164 ACAGAGTACGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAG 105
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412
| ||||||||||| || |||||||| ||||| ||| ||| || || || | || || |
Sbjct 104 GGATGCCTTCCTTATCCTGAATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGA 45
Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATC 68456
| |||| |||||||| ||||| || |||||||| ||||| |||
Sbjct 44 CCTCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATC 1
>seq610
Length=159711
Score = 161 bits (178), Expect = 2e-34
Identities = 173/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293
||| || ||||| |||| ||||| || || || || || || |||||||| || |||||
Sbjct 159572 TCCCCCACGAAGACGCAGTACCAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGA 159513
Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353
|| || | ||||| || | |||||| || ||||| || || | || || || || ||
Sbjct 159512 CAGAGTACGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGG 159453
Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413
||||||||||| || |||||||| ||||| ||| ||| || || || | || || ||
Sbjct 159452 GATGCCTTCCTTATCCTGAATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGAC 159393
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|||| |||||||| ||||| || |||||||| ||||| |||||||||
Sbjct 159392 CTCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCATT 159344
Score = 152 bits (168), Expect = 9e-32
Identities = 171/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
||||||| || || || | |||| || || || || || || |||||||| || ||||
Sbjct 159345 TTCCTCCACGGAGACGGAGCACCAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGG 159286
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
| || || | ||||| || | |||||| || ||||| || || | || || || || |
Sbjct 159285 ACAGAGTACGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAG 159226
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412
| ||||||||||| || |||||||| ||||| ||| ||| || || || | || || |
Sbjct 159225 GGATGCCTTCCTTATCCTGAATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGA 159166
Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| |||| |||||||| ||||| || |||||||| ||||| ||||||||
Sbjct 159165 CCTCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCAT 159117
>seq122
Length=254344
Score = 161 bits (178), Expect = 2e-34
Identities = 176/234 (75%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287
||| ||||| || || || || | |||||||| || || ||||| || |||||||||||
Sbjct 68445 TTAGTTTCCACCACGCAGACGGAGGACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATA 68504
Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347
||||| || || | || ||||| | |||||| |||||||| || | | || || ||
Sbjct 68505 GTCGGACAGGGTACGTCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATC 68564
Query 68348 GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA 68407
|| |||||||| |||||||| || ||||| ||||||||| ||||||||| || | |
Sbjct 68565 TGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTATCCGAAGG 68624
Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || |||| ||||| || || || || | ||||| ||||| ||||||||
Sbjct 68625 CTCCACCTCCAGAGTGATCGTCTTGCCAGTCAACGTCTTCACGAAGATCTGCAT 68678
>seq111
Length=461598
Score = 149 bits (164), Expect = 1e-30
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||||| |||| || ||||| || || || || || || || |||||
Sbjct 359652 CCACCACGCAGGCGCAGCACCAGATGAAGCGTCGATTCCTTCTGAATATTGTAGTCGGAC 359711
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || ||||| | |||||| || ||||| || || | || || || || |||
Sbjct 359712 AGAGTACGTCCGTCTTCCAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCCGGCGGA 359771
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| ||||| || |||||| || || | | || ||
Sbjct 359772 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 359831
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||||||| || ||||||||||| |||||||| ||||||||
Sbjct 359832 TCAAGGGTGATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 359878
>seq673
Length=25255
Score = 141 bits (156), Expect = 2e-28
Identities = 171/233 (73%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| |||| || | || || || ||||| || |||||||| || || ||
Sbjct 24413 CCACCACGAAGTCGCAGCACAAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 24472
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| |||||||| || || | || || || || ||
Sbjct 24473 AGGGTACGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGG 24532
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| ||||| || |||||||||||| | || || ||
Sbjct 24533 ATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATGGTGTCCGATGGCTCGACC 24592
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGCT 68467
|| | |||||||| || || ||||| || || ||||| ||||||||| ||||
Sbjct 24593 TCGAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATTTTGCT 24645
>seq14
Length=264275
Score = 86.0 bits (94), Expect = 1e-11
Identities = 105/141 (74%), Gaps = 3/141 (2%)
Strand=Plus/Plus
Query 9892 TTTAGAAGTCTGCGTCAATTGCAAACACGTTGTC--GTCGGCATTC-ATGACGCCCGCCT 9948
||||||||||||| |||| | ||||| ||||| | ||| | | || |||||| ||
Sbjct 131870 TTTAGAAGTCTGCATCAAGGGTGAACACATTGTCCAGGCGGTTTGCCATCACGCCCCACT 131929
Query 9949 TCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGGGAAATGAGCT 10008
|||||||||| |||| |||||| ||||| | |||||||||||| || |||| ||
Sbjct 131930 TCTGGTACTCGCCTACCTTCTTCTCGAAAAAGTTCGTCTTGCCCTCGAGCGAGATGAACT 131989
Query 10009 CCATGAAGTCAAAGGGGTTCT 10029
|||| ||| || || ||||
Sbjct 131990 CCATAAAGCTGAACGGATTCT 132010
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921596824978400
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