Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq372 194 3e-44 seq966 161 2e-34 seq610 161 2e-34 seq122 161 2e-34 seq111 149 1e-30 seq673 141 2e-28 seq14 86.0 1e-11 >seq372 Length=50997 Score = 194 bits (214), Expect = 3e-44 Identities = 401/589 (68%), Gaps = 16/589 (3%) Strand=Plus/Minus Query 268211 CCAGTTGCAATCACAAAGTCCTCTGG---CTCAGGAGACTGGAGCATTTTCCACATTGCT 268267 || || ||||| |||||||| || || ||| | ||| | ||| |||||| || Sbjct 40104 CCGGTGGCAATGACAAAGTCTTCCGGTTTCTCCTG---CTGCATCATCAGCCACATCGCC 40048 Query 268268 TCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGG 268327 || ||||||||| ||| || ||||| || ||||| | || | || || || | | Sbjct 40047 TCCACATAGTCCTTCGCGTGACCCCAGTCTCGCTTGGAATCGAGATTACCCAGCTCGACG 39988 Query 268328 CATTTCTGCTTGCCGAGCTTCACGCGTGCAAGACCG--CGAGTGATTTTTCGGGTCACGA 268385 |||| ||||| |||||| | || ||||| |||||||| || |||||||| | Sbjct 39987 CATTCCTGCTGCCCGAGCGATATCTTCGC--GACCGAACGAGTGATCTTACGGGTCACAA 39930 Query 268386 ACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGC 268445 | |||| || ||| | || || |||||||| || || |||||||| || ||||| Sbjct 39929 AATTCTCTCCGCGTCGGGGCGATTCATGGTTGAACAGAATCCCGTTGCAGGCAAACATAT 39870 Query 268446 CATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGTACG 268505 | || ||||| ||||| || | || |||||||| | ||||||| ||| ||| |||| Sbjct 39869 CGTACGCCTCGCGGTAATTGATCACGATCCAGTATCCGTACATCTTGGCACATGCATACG 39810 Query 268506 GAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATTTCTCGG--ACTTTGCCAAA 268563 | || || |||| |||||| || | || || || | ||||| |||||||| | Sbjct 39809 GCGAGCGGGGATAGAAGGGAGTTTTCTCGTTCTGGGG--TGTCTCGACCACTTTGCCGTA 39752 Query 268564 GAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCGAGACCGCAGATTCGGAT 268623 ||||||||||| |||||||||||||| | | ||| || || || |||| || Sbjct 39751 CAGCTCGGAGGTGGATGCTTGGTAGAAGCGTACCGCTTTCTCCAGCCCCACCGTTCGAAT 39692 Query 268624 TGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGCTGTATACTCCGGCATCTC 268683 || || |||| || | || || | | ||||||| ||||| || ||||| | || Sbjct 39691 GGCATCCAGCAGCCGCAACGTACCGACGGCATCCACTTCCGCCGTGTACTCGCTGAGATC 39632 Query 268684 GAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAACCTCATCCGGTTTGACCTG 268743 ||| || | || || |||||||| ||| ||| || || | || || | ||| Sbjct 39631 GAAAGAAATCTTCACGTGGCTCTGTGCGGCCAAATTGTAGATTTC-CGTGGGCCGCACTG 39573 Query 268744 CTGC-ACGATCTTCACGAGGTTCGTTGAGTCGGTGAGGTCTCCGTAGTG 268791 |||| | ||||||||| ||| | |||||| | ||| |||||||| Sbjct 39572 CTGCGATGATCTTCACCAGGGCGCTACTGTCGGTCATGTCCCCGTAGTG 39524 >seq966 Length=353950 Score = 161 bits (178), Expect = 2e-34 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293 ||| || ||||| || | || | || || || || || ||||||||||| || ||||| Sbjct 451 TCCCCCACGAAGACGGAGCACTAGATGGAGAGTCGATTCCTTTTGGATGTTGTAGTCGGA 392 Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353 || || | ||||| || | |||||| || ||||| || || | || || || || || Sbjct 391 CAGCGTACGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGG 332 Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413 |||||||||||| || |||||||| ||||| ||| ||| || || || | || || || Sbjct 331 AATGCCTTCCTTATCCTGAATCTTAGCCTTCACGTTCTCAATTGTATCGGATGGCTCGAC 272 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 |||| ||||||||| ||||| || |||||||| ||||| ||||||||| Sbjct 271 CTCCAGGGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCATT 223 Score = 143 bits (158), Expect = 5e-29 Identities = 166/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| ||||| || | |||| || || || || || || || ||||| || |||| Sbjct 224 TTCCTCCACGAAGACGGAGCACCAGATGGAGAGTCGATTCCTTCTGAATGTTGTAGTCGG 165 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || | ||||| || | |||||| || ||||| || || | || || || || | Sbjct 164 ACAGAGTACGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAG 105 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | ||||||||||| || |||||||| ||||| ||| ||| || || || | || || | Sbjct 104 GGATGCCTTCCTTATCCTGAATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGA 45 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATC 68456 | |||| |||||||| ||||| || |||||||| ||||| ||| Sbjct 44 CCTCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATC 1 >seq610 Length=159711 Score = 161 bits (178), Expect = 2e-34 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293 ||| || ||||| |||| ||||| || || || || || || |||||||| || ||||| Sbjct 159572 TCCCCCACGAAGACGCAGTACCAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGA 159513 Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353 || || | ||||| || | |||||| || ||||| || || | || || || || || Sbjct 159512 CAGAGTACGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGG 159453 Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413 ||||||||||| || |||||||| ||||| ||| ||| || || || | || || || Sbjct 159452 GATGCCTTCCTTATCCTGAATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGAC 159393 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 |||| |||||||| ||||| || |||||||| ||||| ||||||||| Sbjct 159392 CTCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCATT 159344 Score = 152 bits (168), Expect = 9e-32 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| || || || | |||| || || || || || || |||||||| || |||| Sbjct 159345 TTCCTCCACGGAGACGGAGCACCAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGG 159286 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || | ||||| || | |||||| || ||||| || || | || || || || | Sbjct 159285 ACAGAGTACGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAG 159226 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | ||||||||||| || |||||||| ||||| ||| ||| || || || | || || | Sbjct 159225 GGATGCCTTCCTTATCCTGAATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGA 159166 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | |||| |||||||| ||||| || |||||||| ||||| |||||||| Sbjct 159165 CCTCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCAT 159117 >seq122 Length=254344 Score = 161 bits (178), Expect = 2e-34 Identities = 176/234 (75%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287 ||| ||||| || || || || | |||||||| || || ||||| || ||||||||||| Sbjct 68445 TTAGTTTCCACCACGCAGACGGAGGACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATA 68504 Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347 ||||| || || | || ||||| | |||||| |||||||| || | | || || || Sbjct 68505 GTCGGACAGGGTACGTCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATC 68564 Query 68348 GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA 68407 || |||||||| |||||||| || ||||| ||||||||| ||||||||| || | | Sbjct 68565 TGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTATCCGAAGG 68624 Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || |||| ||||| || || || || | ||||| ||||| |||||||| Sbjct 68625 CTCCACCTCCAGAGTGATCGTCTTGCCAGTCAACGTCTTCACGAAGATCTGCAT 68678 >seq111 Length=461598 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||||| |||| || ||||| || || || || || || || ||||| Sbjct 359652 CCACCACGCAGGCGCAGCACCAGATGAAGCGTCGATTCCTTCTGAATATTGTAGTCGGAC 359711 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| | |||||| || ||||| || || | || || || || ||| Sbjct 359712 AGAGTACGTCCGTCTTCCAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCCGGCGGA 359771 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| ||||| || |||||| || || | | || || Sbjct 359772 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 359831 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || ||||||||||| |||||||| |||||||| Sbjct 359832 TCAAGGGTGATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 359878 >seq673 Length=25255 Score = 141 bits (156), Expect = 2e-28 Identities = 171/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| |||| || | || || || ||||| || |||||||| || || || Sbjct 24413 CCACCACGAAGTCGCAGCACAAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 24472 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | || || || || || Sbjct 24473 AGGGTACGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGG 24532 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| ||||| || |||||||||||| | || || || Sbjct 24533 ATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATGGTGTCCGATGGCTCGACC 24592 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGCT 68467 || | |||||||| || || ||||| || || ||||| ||||||||| |||| Sbjct 24593 TCGAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATTTTGCT 24645 >seq14 Length=264275 Score = 86.0 bits (94), Expect = 1e-11 Identities = 105/141 (74%), Gaps = 3/141 (2%) Strand=Plus/Plus Query 9892 TTTAGAAGTCTGCGTCAATTGCAAACACGTTGTC--GTCGGCATTC-ATGACGCCCGCCT 9948 ||||||||||||| |||| | ||||| ||||| | ||| | | || |||||| || Sbjct 131870 TTTAGAAGTCTGCATCAAGGGTGAACACATTGTCCAGGCGGTTTGCCATCACGCCCCACT 131929 Query 9949 TCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGGGAAATGAGCT 10008 |||||||||| |||| |||||| ||||| | |||||||||||| || |||| || Sbjct 131930 TCTGGTACTCGCCTACCTTCTTCTCGAAAAAGTTCGTCTTGCCCTCGAGCGAGATGAACT 131989 Query 10009 CCATGAAGTCAAAGGGGTTCT 10029 |||| ||| || || |||| Sbjct 131990 CCATAAAGCTGAACGGATTCT 132010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921596824978400