Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq14 161 2e-34 seq1047 125 1e-23 >seq14 Length=264275 Score = 161 bits (178), Expect = 2e-34 Identities = 290/421 (69%), Gaps = 7/421 (2%) Strand=Plus/Minus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 |||||||| ||||| |||||| |||| ||| | ||| ||||||||||||||| | ||| Sbjct 132541 CTGTTCAATGCCATCGAGACGCTGCCGTGCGTGAAGCGTAAGGCGGACTGGGCGATGAAC 132482 Query 42669 TGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAG 42728 |||||| ||| | || | | ||||||| | | || || || | ||||||||| Sbjct 132481 TGGATCTCGAGCAAGAAGGCTAACTACGGCGAGCGTATCGTGGCGTTCGCAGCCGTCGAG 132422 Query 42729 GGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC--GA 42786 || ||||||||| ||| ||| || ||||||||||||| ||| || ||| | || Sbjct 132421 GGTATCTTCTTCAGTGGCAGCTTTGCTGCCATCTTCTGGCTAAAGAAGC--GTGGCCTGA 132364 Query 42787 TGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACT 42846 |||| || || || ||||| ||||| || ||| | || || || | ||| | |||| Sbjct 132363 TGCCGGGTCTGACGTTCTCCAACGAGCTGATCTCGCGCGATGAAGGTTTACATTGCGACT 132304 Query 42847 TTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGG 42906 ||||||| ||| ||||| | | || || || || ||| | || || || Sbjct 132303 TTGCCTGTCTCATGTTC---AAGTATCTGGTACAGAAACCATCGCGCAAACGCGTAACGG 132247 Query 42907 CCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGT 42966 |||||| || || || ||||||| |||||||||| ||| | | ||||| || Sbjct 132246 ATATCATCCGTGATGCAGTCATGATCGAGCAGGAGTTCCTGACGAAAGCACTGCCTGTCG 132187 Query 42967 CCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATC 43026 || | || ||||| ||| ||||||| |||||||| ||| ||| || || | || Sbjct 132186 ATATGTTGGGTATGAATTGCGAGCTCATGTCGCAGTACATCGAGTTCGTGGCGGATCGTC 132127 Query 43027 T 43027 | Sbjct 132126 T 132126 >seq1047 Length=31309 Score = 125 bits (138), Expect = 1e-23 Identities = 768/1204 (64%), Gaps = 71/1204 (6%) Strand=Plus/Plus Query 244299 CCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGG 244358 |||||||||| |||| || | || ||||| || || || || || || | ||| | Sbjct 17277 CCCACATGTCGTACTGAAGGATTCCTTTGCTAACTGGACTTCCATCATATGATTCGTATG 17336 Query 244359 GACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGA 244418 |||| || | ||||| | |||||| | || ||||| || |||| ||||| || | Sbjct 17337 GACCATCCTGTGCGGCCAATTCGCAGCTCGCTTCAAGGGCTCCGAAGTAAATGGTTTCAA 17396 Query 244419 AGATCATCTTGTTCATGTC----GCGGGCCTTGCCGCAGGT--GAAGGGGATGCCCATCA 244472 | || ||||| || || || || ||| | || | | | ||| || ||||| Sbjct 17397 ACAT----TTGTTGAT-TCAACAGCTGGGCTT-CTTCACTTTCGTAAGGGTGGCGCATCA 17450 Query 244473 TCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGG 244532 ||||| | || |||| || ||||| ||||| || || || | ||| ||| | |||| Sbjct 17451 AGATGAAAGCATCTGCCATGCCTTGCACTCCGATCCCTATCGGACGGTGGCGCATATTGG 17510 Query 244533 AGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGG 244592 | ||| | ||||| || || || ||| | || ||||| | ||||| || || | Sbjct 17511 ATCGCTTTGCTTCCGGAACAGGATAATAATTTATATCGATGATTTTGTTAAGATTCTTAG 17570 Query 244593 TGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGA 244652 | | | | | || || ||| || || | || || | | ||| Sbjct 17571 TAACAGTTTTGGCTACTTCCTTTAGCTT-TG-----CGAAATCATATGTA-------CGA 17617 Query 244653 TGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCT 244712 | | | | |||||||| ||| | ||| | ||||||||| || || || | || | Sbjct 17618 TCGGGTT--TCACAAACATGTTTAAGGCAATCGAGGCCAGGTTACACACAGCAATTTCAT 17675 Query 244713 CCGAGTTG--GTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAG 244770 | ||| | ||| | ||||| |||||||| ||||| |||||||| || || | Sbjct 17676 CTT--TTGAAGAGTATTCTACAATTTCGGTGCACAGGTTTGAACACTTGATCGTTCCGAT 17733 Query 244771 GTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGT 244830 | || || || ||| ||||| || || ||||| |||||| | ||| | || || Sbjct 17734 ATTTTGCTGGTTACTCTTACGATTGCACGCATCTTTGTAAAGCATGTAAGGCACTCCAGT 17793 Query 244831 CTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACC-GTCCTGCGAG 244889 || | ||| | | | | | ||| | || ||||| || | | | || Sbjct 17794 TTCAACCTGTGATTCTATAATTGCGAACCATAAATCTTGTGCCTTTACTTGACGGGTGAA 17853 Query 244890 CCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGT 244949 | ||||| |||||||| ||||| || |||||||| ||||| ||| Sbjct 17854 ACGA-CCCTCGCGCTCGTAGCCAGTGTAGAGTTTTTCGAACTCCTCACCCCATGTCTCCG 17912 Query 244950 CTAGGCCGGGGCACGACGCC-GGGCACATGAGACTCCAC---TCGCCGCCGTCCTTGACC 245005 | || || || | || |||||||| ||||||||| ||| | | ||| || Sbjct 17913 ACAATCCAGGACA-GTCGTGAGGGCACATTAGACTCCACATTTCGTTGGCTTCC---ACA 17968 Query 245006 CTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCG 245065 | ||||||||| | || || ||||| || || | ||| | |||||| | | ||| Sbjct 17969 CGCTGCATGAACAAATCAGGAATCCACAGCGCGTAGAACATGTCCCTTGCGCGGACCTCT 18028 Query 245066 TCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCC 245125 || |||||||||||| | || |||||||| ||||| || || | ||||| |||||| Sbjct 18029 TCTTTGCCAGTGTTCTTTTTTAGATCCAAAAACTCAAATACATCCCCATGCCATGGCTCC 18088 Query 245126 ATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAG- 245184 | |||| ||| | ||| ||||| |||||||| ||||| |||| || ||| | || Sbjct 18089 AGATAGATAGCAAAGGCTCCGGGTCGCTTGTTACCTCCTTGGT-CAACATAACGTGCAGT 18147 Query 245185 CGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGAT 245244 ||| ||| |||||| | || |||| ||||| || || || || || || Sbjct 18148 ATTATTGTAGACGCGCAGCATCGGTACTAAACCGTTCGAAATACCATTCGTTCCTGCAAT 18207 Query 245245 GTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT----GCCTAGTCCGCCGGCGTGCT 245300 || | || || |||| | ||| | || |||| ||||| || || || | Sbjct 18208 ATATGTTCCTTTCGCCCTAA---TGCAG-TGTACATTCAGGCCTATGCCACCAGCCGATT 18263 Query 245301 TGGAGATGAGGGCGCAGCTCTTGATG-GTGTCTGCTATGCCCTCCATGCT---GTCCGAC 245356 | ||||| | ||| || || || | | || || || ||||| ||||| |||||| Sbjct 18264 TAGAGATCAAGGCACA-CTGTTTAAGAGTATCGTAAATTCCCTCGATGCTATCGTCCGA- 18321 Query 245357 TTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGC--TTGGG--GCTGCACGAGTTGAA 245412 ||| ||||||| |||||||| ||||| || ||| ||| | |||||| | || Sbjct 18322 --CATTGTGAGCAGGAAGCAGGACGACAGTTGCGGCCGTTGAGTTGCTGCAGCA----AA 18375 Query 245413 CAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTC-GAGAGGAACCCGTACGTCTGGA--G 245469 || || || ||||| |||||||| | |||| || || || |||||||| || | Sbjct 18376 CATGGTTGGCGAAGCGTGCGTAAAGTATC-GCTCTGACAGCAAATTGTACGTCTCGATGG 18434 Query 245470 CAGA 245473 |||| Sbjct 18435 CAGA 18438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944312994587200