Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_009542.2 Length=33985 Score E Sequences producing significant alignments: (Bits) Value seq730 143 6e-30 >seq730 Length=89331 Score = 143 bits (158), Expect = 6e-30 Identities = 535/819 (65%), Gaps = 30/819 (4%) Strand=Plus/Plus Query 29307 CAACGAAAACCTGAATACCATCATCAGCCCCGGCATCTATCGGCAGGACTGGAACGGCAA 29366 ||| ||| ||||||| | ||| | | ||| ||| | ||| |||| || |||| || Sbjct 79027 CAAGGAAGACCTGAACGCGATCGTTACCCCGGGCGTGTATGCGCAGAACGCCAACGCGAA 79086 Query 29367 TGCGACAGCCGAGCTCAATTACCCAGAGACAAATGCGGGCTCCCTTATCGTGACAGTTGG 29426 | | |||| | || |||||||||| || || || | || | || || || | Sbjct 79087 CACATCTGCCGCTCAGAACTACCCAGAGAACAACGCTGGAACACTGACTGTCACGGTCGC 79146 Query 29427 CGCCGGGGTGCAGCAGCGTTACCACGTATATAACTCGAGTCGGGTCTATAGTCGCGCCCA 29486 || || || || || |||||||| || ||| | || |||||||||| | ||||| Sbjct 79147 GGCAGGCCCCCAACAACGCTACCACGTCTACAACACCAGCCGGGTCTATACCAGAGCCCA 79206 Query 29487 GTACCACACGGGGGCTTTCACTGCCTGGGCCAGGGATTACAACAGCCAGAACAAACCGAG 29546 ||| ||| || | ||||| | ||||| | || ||||||| |||||||||||| | Sbjct 79207 ATACTCCACAGGTGGGTTCACACCTTGGGCTCGAGACTACAACACCCAGAACAAACCAAC 79266 Query 29547 CGCCGCCGATGTGGGGCTAGGGAACCTTGTGAATAAGGGTTGGAATTATGGCGCCA-TAG 29605 ||| || ||||| ||||| || | | || || || ||||| || |||| ||| Sbjct 79267 CGCTGCAGATGTTGGGCTCGGATTGGTAGCCAACAAAGGGTGGAA-CCCGGGGCCAGTAG 79325 Query 29606 CAGACACGTATGCCGTTCGCGATACTTCCGGCGACCTTAATGCTCGCCTGTTCAGGGCGA 29665 | ||||| ||||| || || ||| || | | |||||| ||| | |||| | Sbjct 79326 CTGACACTTATGCAGTGCGGGATGCTGCAGCTGACCTTGCAGCTAGAACACTCAG---AA 79382 Query 29666 CTTACCCCGACGA-----GGCAAATTGCTCTGGAGCCTTGGCCTTCCGGGTCAACAA--- 29717 | ||| || || ||| |||| | ||||| | || || || | ||||| Sbjct 79383 CCAACCTCGTTGATGAGGGGCGGATTG--CCGGAGCAATTGCATTTCGCATTAACAATGG 79440 Query 29718 CGACAATAACTCTTACACCCGATACTGCAACAACCCGGCAGCGGTGCGAGCTTGGCTGAA 29777 || | ||||| || || || |||| |||| || || || | |||||||| Sbjct 79441 CGCCGATAAC---TATCTGCGCTATTGCAGCAACATCAGTGCAGTTCGCGACTGGCTGAA 79497 Query 29778 TCAACATAGAACATCGTGGGATATGGGGTGGCGAGCATAC-ATCGAGGATCCCAACAACC 29836 | | ||| ||| || | |||| || || | || || || || | |||| Sbjct 79498 TGCGGCCAAAACGAAATGGAATGTTGGGTATCG-GCTGGCTATAGAAGACCCGACAAACC 79556 Query 29837 CGATGACCGAATACCACAT-TCCAGGTAAGTACGCGGTAATTACCTAC-CTGAC-CGGCG 29893 | ||||| || ||||| || || || ||||| ||||| || |||||| |||| || | Sbjct 79557 CCATGACTGAGTACCATATCCCCGGGAAAGTA-GCGGTCATCACCTACATTGACTCGTC- 79614 Query 29894 ACGGTGCCTATTTGATTGCCTCATCCAACGGCGGGGGTGGTGCAACAGCACAGC-GTCTG 29952 || | ||| | || | ||||| || || || || | ||| ||| ||| | || Sbjct 79615 -TGGCGTATATCGGGTTTCGTCATCAAATGGGTCTGGCGGGGAAACGGCA-AGCAGGCTT 79672 Query 29953 CGCCTCGATACAAGCGGCAACCTCTATGCCACCGGCGGGGTGCATGATATGGGGCATCGG 30012 || | || | |||||||| | ||| || || || || |||| || || || Sbjct 79673 CGAGTTGACCCCAGCGGCAATGTGCTTGCAACAGGTGGAGTATTTGATTCTGGCCAGAGG 79732 Query 30013 GTATACAGCCCGGTCAACCCGCCACACAACTCTCATAATCACACGGCCGCCCAAGGCAAC 30072 || |||||||| ||||| || ||||||||||| || ||||| || ||||||||||| Sbjct 79733 GTCTACAGCCCCAATAACCCACCTCACAACTCTCACAACCACACCGCAGCCCAAGGCAA- 79791 Query 30073 TCA-GACATTGTCGCCGGTGGCTGGGGGCAGGTCGGCAC 30110 ||| |||||||| || || || | || ||| | ||||| Sbjct 79792 TCAGGACATTGTGGCGGGAGGGTTCGGTCAGATTGGCAC 79830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108627536231080