Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_009542.2
Length=33985
Score E
Sequences producing significant alignments: (Bits) Value
seq730 143 6e-30
>seq730
Length=89331
Score = 143 bits (158), Expect = 6e-30
Identities = 535/819 (65%), Gaps = 30/819 (4%)
Strand=Plus/Plus
Query 29307 CAACGAAAACCTGAATACCATCATCAGCCCCGGCATCTATCGGCAGGACTGGAACGGCAA 29366
||| ||| ||||||| | ||| | | ||| ||| | ||| |||| || |||| ||
Sbjct 79027 CAAGGAAGACCTGAACGCGATCGTTACCCCGGGCGTGTATGCGCAGAACGCCAACGCGAA 79086
Query 29367 TGCGACAGCCGAGCTCAATTACCCAGAGACAAATGCGGGCTCCCTTATCGTGACAGTTGG 29426
| | |||| | || |||||||||| || || || | || | || || || |
Sbjct 79087 CACATCTGCCGCTCAGAACTACCCAGAGAACAACGCTGGAACACTGACTGTCACGGTCGC 79146
Query 29427 CGCCGGGGTGCAGCAGCGTTACCACGTATATAACTCGAGTCGGGTCTATAGTCGCGCCCA 29486
|| || || || || |||||||| || ||| | || |||||||||| | |||||
Sbjct 79147 GGCAGGCCCCCAACAACGCTACCACGTCTACAACACCAGCCGGGTCTATACCAGAGCCCA 79206
Query 29487 GTACCACACGGGGGCTTTCACTGCCTGGGCCAGGGATTACAACAGCCAGAACAAACCGAG 29546
||| ||| || | ||||| | ||||| | || ||||||| |||||||||||| |
Sbjct 79207 ATACTCCACAGGTGGGTTCACACCTTGGGCTCGAGACTACAACACCCAGAACAAACCAAC 79266
Query 29547 CGCCGCCGATGTGGGGCTAGGGAACCTTGTGAATAAGGGTTGGAATTATGGCGCCA-TAG 29605
||| || ||||| ||||| || | | || || || ||||| || |||| |||
Sbjct 79267 CGCTGCAGATGTTGGGCTCGGATTGGTAGCCAACAAAGGGTGGAA-CCCGGGGCCAGTAG 79325
Query 29606 CAGACACGTATGCCGTTCGCGATACTTCCGGCGACCTTAATGCTCGCCTGTTCAGGGCGA 29665
| ||||| ||||| || || ||| || | | |||||| ||| | |||| |
Sbjct 79326 CTGACACTTATGCAGTGCGGGATGCTGCAGCTGACCTTGCAGCTAGAACACTCAG---AA 79382
Query 29666 CTTACCCCGACGA-----GGCAAATTGCTCTGGAGCCTTGGCCTTCCGGGTCAACAA--- 29717
| ||| || || ||| |||| | ||||| | || || || | |||||
Sbjct 79383 CCAACCTCGTTGATGAGGGGCGGATTG--CCGGAGCAATTGCATTTCGCATTAACAATGG 79440
Query 29718 CGACAATAACTCTTACACCCGATACTGCAACAACCCGGCAGCGGTGCGAGCTTGGCTGAA 29777
|| | ||||| || || || |||| |||| || || || | ||||||||
Sbjct 79441 CGCCGATAAC---TATCTGCGCTATTGCAGCAACATCAGTGCAGTTCGCGACTGGCTGAA 79497
Query 29778 TCAACATAGAACATCGTGGGATATGGGGTGGCGAGCATAC-ATCGAGGATCCCAACAACC 29836
| | ||| ||| || | |||| || || | || || || || | ||||
Sbjct 79498 TGCGGCCAAAACGAAATGGAATGTTGGGTATCG-GCTGGCTATAGAAGACCCGACAAACC 79556
Query 29837 CGATGACCGAATACCACAT-TCCAGGTAAGTACGCGGTAATTACCTAC-CTGAC-CGGCG 29893
| ||||| || ||||| || || || ||||| ||||| || |||||| |||| || |
Sbjct 79557 CCATGACTGAGTACCATATCCCCGGGAAAGTA-GCGGTCATCACCTACATTGACTCGTC- 79614
Query 29894 ACGGTGCCTATTTGATTGCCTCATCCAACGGCGGGGGTGGTGCAACAGCACAGC-GTCTG 29952
|| | ||| | || | ||||| || || || || | ||| ||| ||| | ||
Sbjct 79615 -TGGCGTATATCGGGTTTCGTCATCAAATGGGTCTGGCGGGGAAACGGCA-AGCAGGCTT 79672
Query 29953 CGCCTCGATACAAGCGGCAACCTCTATGCCACCGGCGGGGTGCATGATATGGGGCATCGG 30012
|| | || | |||||||| | ||| || || || || |||| || || ||
Sbjct 79673 CGAGTTGACCCCAGCGGCAATGTGCTTGCAACAGGTGGAGTATTTGATTCTGGCCAGAGG 79732
Query 30013 GTATACAGCCCGGTCAACCCGCCACACAACTCTCATAATCACACGGCCGCCCAAGGCAAC 30072
|| |||||||| ||||| || ||||||||||| || ||||| || |||||||||||
Sbjct 79733 GTCTACAGCCCCAATAACCCACCTCACAACTCTCACAACCACACCGCAGCCCAAGGCAA- 79791
Query 30073 TCA-GACATTGTCGCCGGTGGCTGGGGGCAGGTCGGCAC 30110
||| |||||||| || || || | || ||| | |||||
Sbjct 79792 TCAGGACATTGTGGCGGGAGGGTTCGGTCAGATTGGCAC 79830
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 108627536231080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |