Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq372 147 3e-30
seq1047 131 2e-25
seq1693 86.0 7e-12
>seq372
Length=50997
Score = 147 bits (162), Expect = 3e-30
Identities = 286/412 (69%), Gaps = 8/412 (2%)
Strand=Plus/Plus
Query 8526 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCTCAAAATGAGGAG 8585
|| |||||||| |||| ||| ||| || ||||| || | || || || ||| |
Sbjct 39728 TACCAAGCATCCACCTCCGAGCTGTACGGCAAAGTGGTCGAGACACCCCAGAACGAGAAA 39787
Query 8586 ACACCCTTCTATCCACGATCCGTCTATGGCGTCT-CAAAGGT-TGCGGCACATTGGCTCG 8643
|| ||||||||||| || || |||| | | | | ||| | | ||| | | ||| |||
Sbjct 39788 ACTCCCTTCTATCCCCGCTCGCCGTATG-CATGTGCCAAGATGTACGG-ATACTGGATCG 39845
Query 8644 TGAAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTCAACCACG 8703
||| |||||||| || | || | | | ||||| ||| ||| ||||| |||||||| |
Sbjct 39846 TGATCAATTACCGCGAGGCGTACGATATGTTTGCCTGCAACGGGATTCTGTTCAACCATG 39905
Query 8704 AGTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCAC-CGAT-GGTATCAAACA 8761
| || ||||| || || | |||| ||||| |||||||| || | ||| | || |
Sbjct 39906 AATCGCCCCGACGCGGAGAGAATTTTGTGACCCGTAAGATCACTCGTTCGGTCGCGAAGA 39965
Query 8762 AATCGTCGCGGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACTG 8821
|||| | |||| || ||| | | | || |||| || ||| | || || | |||||
Sbjct 39966 TATCG-CTCGGGC-AGCAGGAATGCGTCGAGCTGGGTAATCTCGATTCCAAGCGAGACTG 40023
Query 8822 GGGACACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTTCAACAAGAAGAGGCGGA 8881
||| ||||| ||||||||||| || || |||||||| | | || || || | ||||
Sbjct 40024 GGGTCACGCGAAGGACTATGTGGAGGCGATGTGGCTGATGATGCAGCAGGAGAAACCGGA 40083
Query 8882 CGAATATGTCGTCGCGACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAG 8933
|| | |||| | || || || |||||||| || || | |||||||| |||
Sbjct 40084 AGACTTTGTCATTGCCACCGGCGAGACACATTCGGTGCGCGAGTTCGTGGAG 40135
>seq1047
Length=31309
Score = 131 bits (144), Expect = 2e-25
Identities = 435/675 (64%), Gaps = 9/675 (1%)
Strand=Plus/Plus
Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001
|||| ||| | |||||||| ||||| | || |||||||| | ||||| || || ||
Sbjct 17117 TAGACATTTGAAGTGTATGGTTCAAAAGATTCGTTGTTACCGAGTATTTGCGCAGTCGAC 17176
Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061
|| || ||||| || || | || ||| || || | || | | | ||| |
Sbjct 17177 GCGGTCGGCATAGGCGCTAAAAGCAGGGAATTGCGCACGCCATGTGTCACAATATTTCTT 17236
Query 114062 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGG 114121
|| || | |||| || | | | | || | || |||||| || |||| |||
Sbjct 17237 TTAAGCTCAGCCCAATCCCACAATTCCGTAGGCTTCTTCTCCCACATGTCGTACTGAAGG 17296
Query 114122 ATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAAT 114181
|| |||| | |||| ||| ||| ||| |||||||| || || | ||||||
Sbjct 17297 ATTCCTTTGCTAACTGGACTTCCATCATATGATTCGTATGGACCATCCTGTGCGGCCAAT 17356
Query 114182 TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCC 114241
||| ||||||| || |||||| || || || || ||||| || | ||||| |
Sbjct 17357 TCGCAGCTCGCTTCAAGGGCTCCGAAGTAAATGGTTTCAAACATTTGTTGATTCAACAGC 17416
Query 114242 TTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGG 114301
| ||| || || || | | | | || ||| || || |||| || | |||||
Sbjct 17417 TGGGCTTCTTCACTTTCGTAAGGGTGGCGCATCAAGATGAAAGCATCTGCCATGCCTTGC 17476
Query 114302 ACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGGA 114358
|| |||| || || || || || | |||||| || ||| | ||| || |||
Sbjct 17477 ACTCCGATCCCTATCGGACGGTGGCGCATATTGGA---TCGCTTTGCTTCCGGAACAGGA 17533
Query 114359 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 114418
||| |||| ||||||| | | || ||||| || || ||| || | | ||| |
Sbjct 17534 TAATAATTTATATCGATGATTTTGTTAAGATTCTTAGTAACAGTTTTGGCTACTTCCTTT 17593
Query 114419 AGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGAC 114478
|||||| || ||||| | | ||| || || ||| || | | ||| || ||
Sbjct 17594 AGCTTTGCGAAATCATATGTACGA---TCGGGTTTCACAAACATGTTTAAGGCAATCGAG 17650
Query 114479 GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAA 114538
||||| |||||||||| | ||||| || || ||| |||| |||||| || ||||
Sbjct 17651 GCCAGGTTACACACAGCAATTTCATCTTTTGAAGAGTATTCTACAATTTCGGTGCACAGG 17710
Query 114539 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 114598
||||||| ||| || || || | || | || || ||| || |||||||| |||
Sbjct 17711 TTTGAACACTTGATCGTTCCGATATTTTGCTGGTTACTCTTACGATTGCACGCATCTTTG 17770
Query 114599 TAAAGCATGTATGGC 114613
||||||||||| |||
Sbjct 17771 TAAAGCATGTAAGGC 17785
>seq1693
Length=148903
Score = 86.0 bits (94), Expect = 7e-12
Identities = 147/208 (71%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 10947 CACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGT-TGATTT 11005
||| ||||| | |||||||| || || ||||||||||| | ||| |||||| | | |
Sbjct 53102 CACCGCGTTTTCTTCCGACGGCATCGATCTCATCGATGAACAGGATGCACGGTGCGCTCT 53161
Query 11006 TCACGGGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCC 11065
|| | ||| | | |||| || || || || | | ||| ||||| ||||||||||||
Sbjct 53162 TC-CTGGCCATTGCAAACATGTCACGCACACGGGACGGACCAACACCGACAAACATTTCC 53220
Query 11066 ACAAAATTGGCGGCGGA-ACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCG 11124
| ||| | || | || || | |||||| || ||||||| |||||| || | ||
Sbjct 53221 AAAAACTCGGAACCCGACACCGT-GATGAACGGTACGTTGGCTTCACCGGCAGTCGCCTT 53279
Query 11125 GGCGAGGAGGGTCTTCCCCGTCCCAGGT 11152
||| || || || || ||||| || |||
Sbjct 53280 GGCCAGTAGCGTTTTACCCGTTCCCGGT 53307
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597337023437600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |