Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq111 104 3e-17
seq1638 98.7 1e-15
seq87 95.1 1e-14
seq892 91.5 2e-13
seq321 91.5 2e-13
seq1836 87.8 2e-12
seq1723 87.8 2e-12
seq1637 87.8 2e-12
seq833 87.8 2e-12
>seq111
Length=461598
Score = 104 bits (114), Expect = 3e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053
|||| ||||| ||| | || ||||| ||||||||||| || | |||||| || ||
Sbjct 359664 CGCAGCACCAGATGAAGCGTCGATTCCTTCTGAATATTGTAGTCGGACAGAGTACGTCCG 359723
Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113
|| || |||||||| |||||||| || || |||||||| || | || | || |||||||
Sbjct 359724 TCTTCCAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCCGGCGGAATGCCCTCCTTG 359783
Query 42114 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 42173
||| ||| || || | || | | ||| || | || || || | ||||||
Sbjct 359784 TCCTGGATCTTGGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTGATG 359843
Query 42174 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| || ||||| || || || || ||||| |||||
Sbjct 359844 GTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 359878
>seq1638
Length=53948
Score = 98.7 bits (108), Expect = 1e-15
Identities = 77/92 (84%), Gaps = 4/92 (4%)
Strand=Plus/Plus
Query 56991 GTTTATGAAAA----ATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACA 57046
||||| ||||| ||||||||| || | | |||||||||| ||||||||||||||||
Sbjct 4124 GTTTAAGAAAAGAGTATTTTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACA 4183
Query 57047 GGCGGACATACTCACCACTATACTACCGAGGA 57078
||||| ||||| |||||||||||| ||||||
Sbjct 4184 GGCGGGGATACTGACCACTATACTATCGAGGA 4215
>seq87
Length=924360
Score = 95.1 bits (104), Expect = 1e-14
Identities = 70/82 (85%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
|||||| | |||| || | | |||||||||| ||||||||||||||||||||| ||||
Sbjct 253184 AAAAATCTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 253125
Query 57058 TCACCACTATACTACCGAGGAT 57079
| |||||||||||| |||||||
Sbjct 253124 TGACCACTATACTATCGAGGAT 253103
Score = 89.7 bits (98), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064
|||||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||
Sbjct 253884 TTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 253825
Query 57065 TATACTACCGAGGA 57078
||||||| ||||||
Sbjct 253824 TATACTATCGAGGA 253811
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062
|| ||||| || | | |||||||||| ||||||||||||||||||||| ||||| |||
Sbjct 251773 TTGTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACC 251832
Query 57063 ACTATACTACCGAGGA 57078
||||||||| ||||||
Sbjct 251833 ACTATACTATCGAGGA 251848
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062
||| |||| || | | |||||||||| ||||||||||||||||||||| ||||| |||
Sbjct 254201 TTTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACC 254260
Query 57063 ACTATACTACCGAGGA 57078
||||||||| ||||||
Sbjct 254261 ACTATACTATCGAGGA 254276
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 252343 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 252284
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 252283 TACTATCGAGGA 252272
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 254612 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 254553
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 254552 TACTATCGAGGA 254541
>seq892
Length=19077
Score = 91.5 bits (100), Expect = 2e-13
Identities = 70/82 (85%), Gaps = 1/82 (1%)
Strand=Plus/Plus
Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056
|||||| ||| ||| || | | |||||||||| ||||||||||||||||||||| |||
Sbjct 926 AAAAATGTTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 985
Query 57057 CTCACCACTATACTACCGAGGA 57078
|| |||||||||||| ||||||
Sbjct 986 CTGACCACTATACTATCGAGGA 1007
>seq321
Length=53978
Score = 91.5 bits (100), Expect = 2e-13
Identities = 70/82 (85%), Gaps = 1/82 (1%)
Strand=Plus/Minus
Query 56998 AAAAATT-TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056
||| ||| |||||| || | | |||||||||| ||||||||||||||||||||| |||
Sbjct 1275 AAATATTCTTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 1216
Query 57057 CTCACCACTATACTACCGAGGA 57078
|| |||||||||||| ||||||
Sbjct 1215 CTGACCACTATACTATCGAGGA 1194
>seq1836
Length=23313
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063
|| |||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||
Sbjct 23107 TTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCA 23048
Query 57064 CTATACTACCGAGGAT 57079
|||||||| |||||||
Sbjct 23047 CTATACTATCGAGGAT 23032
>seq1723
Length=33783
Score = 87.8 bits (96), Expect = 2e-12
Identities = 73/87 (84%), Gaps = 3/87 (3%)
Strand=Plus/Minus
Query 57002 ATTTTC--TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTC 57059
|||||| ||| || | | |||||||||| ||||||||||||||||||||| |||||
Sbjct 32212 ATTTTCCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTT 32153
Query 57060 ACCACTATACTACCGAGGA-TTGAATA 57085
|||||||||||| |||||| ||| |||
Sbjct 32152 ACCACTATACTATCGAGGACTTGCATA 32126
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 29631 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 29690
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 29691 TACTATCGAGGA 29702
>seq1637
Length=183544
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062
||| |||| || | | |||||||||| ||||||||||||||||||||| ||||| |||
Sbjct 656 TTTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACC 597
Query 57063 ACTATACTACCGAGGA 57078
||||||||| ||||||
Sbjct 596 ACTATACTATCGAGGA 581
>seq833
Length=7226
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062
||| |||| || | | |||||||||| ||||||||||||||||||||| ||||| |||
Sbjct 574 TTTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACC 633
Query 57063 ACTATACTACCGAGGA 57078
||||||||| ||||||
Sbjct 634 ACTATACTATCGAGGA 649
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543197725844800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |