Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq1047 132 5e-26
seq673 114 1e-20
seq111 114 1e-20
seq966 109 5e-19
seq122 95.1 1e-14
>seq1047
Length=31309
Score = 132 bits (146), Expect = 5e-26
Identities = 902/1449 (62%), Gaps = 36/1449 (2%)
Strand=Plus/Plus
Query 153998 TAAATCTTCAACCAAGTGCTGGTTAATTACTTGAAAATCGCCGGCCAATACGCGGCGCAC 154057
|| ||||| | ||| || || || | ||||||||| ||||| | | ||| | ||
Sbjct 17056 TAGATCTTTTAGCAAATGATGATTCACTACTTGAAACTCGCCAGAAAGTACCCTACGATT 17115
Query 154058 ATACAAATTGCTGGTGAACGGCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGT 154117
|| | ||| ||| | || || || ||||||||||| || | |||||| || || |
Sbjct 17116 GTAGACATTTGAAGTGTATGGTTCAAAAGATTCGTTGTTACCGAGTATTTGCGCAGTCGA 17175
Query 154118 TGCTGTGGGCATATACGCCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCAA 154177
|| || |||||| ||| | | || || || |||| || ||| | ||||
Sbjct 17176 CGCGGTCGGCATAGGCGCTAAAAGCAGGGAATTGCGCACGCCATGTGTCACAATATTTCT 17235
Query 154178 TTTTAAATCTGCCCAATTCCACAAGTTGGTAGGTTGCACGTTCCACATGTCGTATTGCAA 154237
||| | || ||||||| |||||| | ||||| | | | |||||||||||| || |
Sbjct 17236 TTTAAGCTCAGCCCAATCCCACAATTCCGTAGGCTTCTTCTCCCACATGTCGTACTGAAG 17295
Query 154238 AACACCCAAACTCGCCGGACTGTCACTATAACTAGAGTACGGCCCGTTCAGTTTTGCCAA 154297
| || || | ||||| || ||| ||| || || | | || |||||
Sbjct 17296 GATTCCTTTGCTAACTGGACTTCCATCATATGATTCGTATGGACCATCCTGTGCGGCCAA 17355
Query 154298 GTCGCAACTGGCTTCTAACGCCGCATAGTATACGGTTTCGGCAATTTGTTTGTTTAACAT 154357
||||| || ||||| | || | |||| | |||||| ||||||| || ||||
Sbjct 17356 TTCGCAGCTCGCTTCAAGGGCTCCGAAGTAAATGGTTTCAAACATTTGTTGATTCAACAG 17415
Query 154358 TTTGGCTTTGTCACTTTCGTACGGCAATCCCAATATACAAAAAGCATCGGCGAGCCCTTG 154417
| ||||| ||||||||||| || | || | |||||||| || | |||||
Sbjct 17416 CTGGGCTTCTTCACTTTCGTAAGGGTGGCGCATCAAGATGAAAGCATCTGCCATGCCTTG 17475
Query 154418 AATGCCCACTCCAACGGGTCTGTGTTTTAAATTCGATTCTTTGGCAGCCTCCAGAGGATA 154477
| || | || | || | ||| | ||| ||| || || || | ||||||
Sbjct 17476 CACTCCGATCCCTATCGGACGGTGGCGCATATTGGATCGCTTTGCTTCCGGAACAGGATA 17535
Query 154478 ATAATTGATATCGATAATTTTATTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA 154537
|||||| |||||||| ||||| || |
Sbjct 17536 ATAATTTATATCGATGATTTTGTTAAGATTCTTAGTAACAGTTTTGGCTACTTCCTTTAG 17595
Query 154538 ---TGCGACAAAATCAAAC--AC--TCCGCTTTTAATAAAACGATTTACACACACAGACG 154590
||||| ||||| | || || | ||| | || | | || | || | || |
Sbjct 17596 CTTTGCGA---AATCATATGTACGATCGGGTTTCACAAACATGTTTAAGGCAATC-GAGG 17651
Query 154591 CCAAGTTGCAAACGGCAATTTCTTCAGAACTACTGTATTGCACAATTTCTGCGCACAAAT 154650
||| ||| || || |||||||| || | ||||| |||||||| | ||||| |
Sbjct 17652 CCAGGTTACACACAGCAATTTCATCTTTTGAAGAGTATTCTACAATTTCGGTGCACAGGT 17711
Query 154651 TACTGCATCGAATGGTGCCCAGGTTTTTCTGATTCGATTTGATGTTGCATGCGTCTTTGT 154710
| || || || || | |||| ||| || || ||||| || |||||||
Sbjct 17712 TTGAACACTTGATCGTTCCGATATTTTGCTGGTTACTCTTACGATTGCACGCATCTTTGT 17771
Query 154711 ACAAAATGTACGGGGTGCCCGTTTCCACTTGGGTTTCAATAATTGTGCGAAACAGACTTC 154770
| | ||||| || || ||||| || || | ||| ||||||| |||| || | ||
Sbjct 17772 AAAGCATGTAAGGCACTCCAGTTTCAACCTGTGATTCTATAATTG--CGAACCATAAATC 17829
Query 154771 --GCGCCTCAACTTGACAAGTAAATCGATTTTCGCTCTCATATTGTTCGTACAGTTTTTC 154828
| |||| ||||||| || || ||| |||| ||| || ||| ||||||||
Sbjct 17830 TTGTGCCTTTACTTGACGGGTGAAACGACCCTCGCGCTCGTAGCCAGTGTAGAGTTTTTC 17889
Query 154829 AAACTCTAAACTGTACACGTCCGACAAACCGGGACAGCGGTCGGGACACATCAATGACCA 154888
||||| || | |||||||| || |||||| || || ||||| | |||
Sbjct 17890 GAACTCCTCACCCCATGTCTCCGACAATCCAGGACAGTCGTGAGGGCACATTAGACTCCA 17949
Query 154889 CATTTCGTTTTGTTGTACGCGTTTCATAAACAAATCCGGCACCCACAAAGCGTACAACAA 154948
||||||||| || || || | ||| |||||||| || | ||||| ||||| ||||
Sbjct 17950 CATTTCGTTGGCTTCCACACGCTGCATGAACAAATCAGGAATCCACAGCGCGTAGAACAT 18009
Query 154949 ATCACGCGCCTTTTTGTCTTCAGCGCCCATGTTTCGCTTTAAATTCAAAAAATCATATAT 155008
|| | || ||||| ||| |||| |||| || |||||| ||| |||
Sbjct 18010 GTCCCTTGCGCGGACCTCTTCTTTGCCAGTGTTCTTTTTTAGATCCAAAAACTCAAATAC 18069
Query 155009 GTCGGCGTGCCACGGCTCTAAATATACGGCCATCGCGCC--TTTGCGT-TTTCCTCCTTG 155065
|| | ||||| ||||| | ||| | || | || || | || | || ||||||||
Sbjct 18070 ATCCCCATGCCATGGCTCCAGATAGATAGCAAAGGCTCCGGGTCGCTTGTTACCTCCTTG 18129
Query 155066 ATCCACGTGACGCACACAATTATTGTACACGCGCAACAATGGTTCCACGCCGCTGGCCGT 155125
|| || | ||| || ||||||||| ||||||| || ||| | | ||| | | |
Sbjct 18130 GTCAACATAACGTGCAGTATTATTGTAGACGCGCAGCATCGGTACTAAACCGTTCGAAAT 18189
Query 155126 GC----CGTTGGTGCCACGTATCGCGCTGCCGCGAGCACGCGCTTTATGAACATTAACGC 155181
| |||| ||| | ||| || ||| | || || ||||| | ||
Sbjct 18190 ACCATTCGTTCCTGCAATATATGTTCCTTTCGCCCTAATGC----AGTGTACATTCAGGC 18245
Query 155182 CCAAACCTCC-GCCGTATTTAGATATTTGCGCACAGTCCGCCAAAGTTTCGTACATTCCT 155240
| | || || |||| ||||||| || ||||| | | ||| ||||| |||||
Sbjct 18246 CTATGCCACCAGCCG-ATTTAGAGATCAAGGCACACTGTTTAAGAGTATCGTAAATTCCC 18304
Query 155241 TTGATGCTGTCTTCTTTCAACGTCAACAAGAAACACGAAGATAATTGAG---GTTGAGGG 155297
| |||||| || || || || | || ||| || || || | ||| | ||||||
Sbjct 18305 TCGATGCTATCGTCCGACATTGTGAGCAGGAAGCAGGACGACAGTTGCGGCCGTTGAG-- 18362
Query 155298 CAGCCGGCCGCAAATAATGTAGGACTAGCGTGTGTAAA-CATTTTGTTGGCGGTTAAGTT 155356
| || ||||| | || || |||||| ||||| || || | | || ||
Sbjct 18363 -TTGCTGCAGCAAACATGGTTGGCGAAGCGTGCGTAAAGTATCGCTCTGACAG-CAAATT 18420
Query 155357 GTAAGTTTCGATGGCGGCGTCAATGTCACGACCGTGTATACCGATCGCCACGCGCATCAG 155416
||| || |||||||| | ||||| || ||| ||||| ||||| || || ||||| ||
Sbjct 18421 GTACGTCTCGATGGCAGAATCAATATCTTCACCATGTATGCCGATAGCAACACGCATGAG 18480
Query 155417 CATGTGTTG 155425
|||||||||
Sbjct 18481 CATGTGTTG 18489
>seq673
Length=25255
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | || ||||| ||||| | ||||| || || || |||||||| || |
Sbjct 24412 ACCACCACGAAGTCGCAGCACAAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 24471
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||| || |||| || |||||||||||||| | || || |||||||| || || ||
Sbjct 24472 AAGGGTACGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGG 24531
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||||| || || || || || || ||| ||| ||| | || || | || ||
Sbjct 24532 GATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATGGTGTCCGATGGCTCGAC 24591
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| | || | |||||||||||| | ||||| |||||||| ||||||||
Sbjct 24592 CTCGAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATTTT 24642
>seq111
Length=461598
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | ||||| ||||||| ||||||||| || ||||| ||||| || |
Sbjct 359651 ACCACCACGCAGGCGCAGCACCAGATGAAGCGTCGATTCCTTCTGAATATTGTAGTCGGA 359710
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || || ||||||| ||||||||||| || | || || |||||||| || || ||
Sbjct 359711 CAGAGTACGTCCGTCTTCCAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCCGGCGG 359770
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| || || || || || || || ||| ||| ||| | ||||| || || ||
Sbjct 359771 AATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTATCCGAGGGCTCGAC 359830
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | |||||| || || | ||||| ||||| || |||||
Sbjct 359831 CTCAAGGGTGATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 359878
>seq966
Length=353950
Score = 109 bits (120), Expect = 5e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||||||||| | |||||||| ||||| |||||||| || | | || || | ||
Sbjct 435 AGCACTAGATGGAGAGTCGATTCCTTTTGGATGTTGTAGTCGGACAGCGTACGACCATCC 376
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| |||||||| || || | || || |||||||| || |||||||| ||||| || ||
Sbjct 375 TCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGAATGCCTTCCTTATCC 316
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| || ||| | |||||| | || || || | || | ||||
Sbjct 315 TGAATCTTAGCCTTCACGTTCTCAATTGTATCGGATGGCTCGACCTCCAGGGTGATGGTC 256
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
|| || |||| || || |||||||| ||||||
Sbjct 255 TTTCCTGTCAGGGTCTTCACGAAAATCTGCATT 223
Score = 93.3 bits (102), Expect = 4e-14
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| ||||| | |||||||| || ||||||||||| || | | || || | ||
Sbjct 207 AGCACCAGATGGAGAGTCGATTCCTTCTGAATGTTGTAGTCGGACAGAGTACGACCATCC 148
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| |||||||| || || | || || |||||||| || ||||| || ||||| || ||
Sbjct 147 TCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGGATGCCTTCCTTATCC 88
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| || ||| | ||||| | || || || | ||| | ||||
Sbjct 87 TGAATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGACCTCCAGAGTGATGGTC 28
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAAT 64437
|| || |||| || || ||||||||
Sbjct 27 TTTCCTGTCAGGGTCTTCACGAAAAT 2
>seq122
Length=254344
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| || || || ||||| || || | | ||| || ||||||| ||||||||||||
Sbjct 68482 GTCGACTCCTTCTGGATGTTATAGTCGGACAGGGTACGTCCGTCTTCCAGCTGCTTGCCG 68541
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | || | |||||||| || || ||||| || || || || || || || |||
Sbjct 68542 GCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 68601
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| ||| | ||||| | ||||| || | ||| | |||||||| ||||| ||
Sbjct 68602 ACGTTCTCGATGGTATCCGAAGGCTCCACCTCCAGAGTGATCGTCTTGCCAGTCAACGTC 68661
Query 64427 TTTACGAAAATTTGCAT 64443
|| ||||| || |||||
Sbjct 68662 TTCACGAAGATCTGCAT 68678
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499630934856800
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