Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_011335.1
Length=119343
Score E
Sequences producing significant alignments: (Bits) Value
seq78 109 4e-19
>seq78
Length=241554
Score = 109 bits (120), Expect = 4e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399
||||| || || ||||| |||||||| || ||| ||||| |||| | |||||||||
Sbjct 62536 GCCGGCTTTGGCGTGACTGCCGGCGTTCACCGGCTGTGGTGCCACCGCTCATACAAGGCC 62595
Query 108400 ACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATC 108459
| ||||| | | ||||| | |||| |||| | || || || ||||| |||
Sbjct 62596 AAGCTGCCGTTGCGCATCATCCTGATGTGCTGCTACTCGATCGCGGGCCAAAACACGATC 62655
Query 108460 CCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACAC-GACGGCCGACCC 108518
| ||||| | ||||| | | |||||||||||||| || || ||||| || ||
Sbjct 62656 TACGACTGGGTCCGGGATCATCGCATCCACCACAAGTACTCGGAAACGGACGG-TGATCC 62714
Query 108519 ACACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATG 108567
||||||||| ||| |||| ||| || | ||||||| || ||||| |||
Sbjct 62715 ACACAACGCGAACCGGGGCTTCCTGTACGCGCACGTCGGTTGGCTGATG 62763
Score = 93.3 bits (102), Expect = 3e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 108883 GCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCC 108942
||| | ||||| ||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct 65105 GCTATGGGCGAAGGATGGCACAACTACCACCACGTGTTCCCGTGGGACTACAAGGCCGCC 65164
Query 108943 GAGTTGGGGAACGACT 108958
|| |||| ||| |||
Sbjct 65165 GAACTGGGCAACTACT 65180
Score = 84.2 bits (92), Expect = 2e-11
Identities = 90/116 (78%), Gaps = 5/116 (4%)
Strand=Plus/Plus
Query 108858 AGAAAACAAATTGGTGGCGG-CGTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACG 108916
||||||||| ||| || ||||| | | || || ||||||||||||||||||||||
Sbjct 71835 AGAAAACAAGGCCGTGTCGATCGTTGCCA-TGGGTGAAGGATGGCACAACTACCACCACG 71893
Query 108917 TGTTCCCCTACGACTACAAGGCCGCCGAGTTGGGGAACGACT---TTAATTTCACC 108969
||||||| | ||||||||||| |||||| || | ||| ||| | ||| |||||
Sbjct 71894 TGTTCCCGTGGGACTACAAGGCGGCCGAGCTGAGCAACTACTCCGTCAATCTCACC 71949
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381762470659680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |