Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1047 172 5e-38 seq14 136 4e-27 seq673 86.0 6e-12 >seq1047 Length=31309 Score = 172 bits (190), Expect = 5e-38 Identities = 1158/1837 (63%), Gaps = 46/1837 (3%) Strand=Plus/Plus Query 152712 GCAGGCTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCGCAGCG-CCACGAGTAATT 152770 || || || || || ||||||||||| || ||||| ||||| || | ||| ||| Sbjct 16760 GCTGGTTTGGTACGTAAATAATACATCCCGGTTTTAAGGCC-CATCTTCCAGCCGTAGAA 16818 Query 152771 GTGAATCGAAGTCATCACAGCGTACGTCGGTTGCGCCACGAACAGATTAAACGATTGGCT 152830 ||||| || || | | |||| | || | || ||| | ||| || || || Sbjct 16819 ATGAATTGATGTTAGTTTACCGTAGTTTGGCTCAGCTACGTGAATATTGAAAGACTGCGA 16878 Query 152831 CTGATCTATGAAAGCGTTACGGTCGGCCGCCATCTCAATCATGC--GTTTTGCCTTCA-T 152887 || || ||||| || |||||||||||||| | | |||| ||||| | | | Sbjct 16879 TTGGTCAATGAATGCTCCTCGGTCGGCCGCCATTT---TGATGCAAGTTTTCACAGAAAT 16935 Query 152888 CTCCCAGGCGGTTTTGTACAAATTTTTAACGCTATCCGGTATACCTTCAATGTTCTGAAT 152947 ||||||| | |||||||||| ||| | | | ||| || | || || || || || Sbjct 16936 CTCCCAGACCGTTTTGTACAGATTGCGGATGTGTTGCGGAATTTCCTCTATCTTTTGTAT 16995 Query 152948 AGAGCCCTTGTGTGCAAAAATAGCGTTTCGTATTTCGGGCGTGT-ACACGTTCAGTTTAA 153006 ||||| || || || | ||| ||| ||||| ||| ||| | || || | Sbjct 16996 TGAGCCATTTTGGGCCAGAATCTTGTTCTTCATTTCAT-CGTCCCACAGTTCCAATTCAG 17054 Query 153007 TGAGGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCA 153066 | || || | | ||| | || || || |||||||||||||| | | || | | Sbjct 17055 TTAGATCTTTTAGCAAATGATGATTCACTACTTGAAACTCGCCAGAAAGTACCCTACGAT 17114 Query 153067 AATATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGG 153126 || ||||| |||| | |||||||| |||||||| || || |||||||| || || | Sbjct 17115 TGTAGACATTTGAAGTGTATGGTTCAAAAGATTCGTTGTTACCGAGTATTTGCGCAGTCG 17174 Query 153127 TTGCGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGT 153186 ||||||||||| ||| | | || ||||| |||| ||| || | ||| | | Sbjct 17175 ACGCGGTCGGCATAGGCGCTAAAAGCAGGGAATTGCGCACGCCATGTGTCACAATAT-TT 17233 Query 153187 CCTTCAA-CGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGT 153245 | || || | | ||||||||||| ||| || || | ||||||||||||||| Sbjct 17234 CTTTTAAGCTCAGCCCAATCCCACAATTCCGTAGGCTTCTTCTCCCACATGTCGTACTGA 17293 Query 153246 AACACTCCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCC 153305 | | |||| || | ||||| || || | | ||| || || || |||| Sbjct 17294 AGGATTCCTTTGCTAACTGGACTTCCATCATATGATTCGTATGGACCATCCTGTGCGGCC 17353 Query 153306 AGTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGA 153365 | ||||||||| || || || || || |||| |||||||| ||||||| ||| | Sbjct 17354 AATTCGCAGCTCGCTTCAAGGGCTCCGAAGTAAATGGTTTCAAACATTTGTTGATT--CA 17411 Query 153366 ACGGC--CGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGAC 153423 || || |||||||| || ||||| || ||||| || | || || || |||| | Sbjct 17412 ACAGCTGGGCTTCTTCACTTTCGTAAGGGTGGCGCATCAAGATGAAAGCATCTGCCATGC 17471 Query 153424 CCTGGATACCGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGG 153483 | || | |||| || || || || || | ||| ||| | || || | | Sbjct 17472 CTTGCACTCCGATCCCTATCGGACGGTGGCGCATATTGGATCGCTTTGCTTCCGGAACAG 17531 Query 153484 GATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCA-CTTTAGTTATCGCC 153542 |||| | ||| |||||| |||||||| || || | | | || ||| | || || Sbjct 17532 GATAATAATTTATATCGATGATTTTGTTAAGATT-CTTAGTAACAGTTTTGGCTACTTCC 17590 Query 153543 TTAAGTTTCTCGAAATCATAGGTCATTTCGTCGACGCGTACGCATCGATTCACGGCAATA 153602 || || || |||||||||| || ||| | | | ||| || | |||||| Sbjct 17591 TTTAGCTTTGCGAAATCATATGTACGATCG-GGTTTCACAAACAT--GTTTAAGGCAATC 17647 Query 153603 GACGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAG 153662 || ||||| ||||| || || | || || ||| | || || |||| ||| Sbjct 17648 GAGGCCAGGTTACACACAGCAATTTCATCTTTTGAAGAGTATTCTACAATTTCGGTGCAC 17707 Query 153663 AGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCT 153722 ||||| || || || || | ||||||||| || || || ||||||||||| ||| Sbjct 17708 AGGTTTGAACACTTGATCGTTCCGATATTTTGCTGGTTACTCTTACGATTGCACGCATCT 17767 Query 153723 TTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT---AAACCTATGC 153779 ||| | |||||||| || | || || || || || | ||| | || |||| || Sbjct 17768 TTGTAAAGCATGTAAGGCACTCCAGTTTCAACCTGTGATTCTATAATTGCGAACC-AT-- 17824 Query 153780 AGGTCCTGCGCTCGCACCCG-CTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAG 153838 | || || || || | | | || | || ||||||| |||||| | ||| || Sbjct 17825 AAATCTTGTGCCTTTACTTGACGGGTGA-AACGACCCTCGCGCTCGTAGCCAGTGTAGAG 17883 Query 153839 TCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAG 153898 | || ||||| || || | || | | || ||||| | || || ||||| || Sbjct 17884 TTTTTCGAACTCCTCACCCCATGTCTCCGACAATCCAGGACAGTCGTGAGGGCACATTAG 17943 Query 153899 CGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTA 153958 |||||| |||| ||| | || || ||||||||| ||| || | ||| |||||||| Sbjct 17944 ACTCCACATTTCGTTGGCTTCCACACGCTGCATGAACAAATCAGGAATCCACAGCGCGTA 18003 Query 153959 CATGAGGTCGCGCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGAGCACGCT 154018 | | ||| | || | || || ||| |||| ||| |||| | | Sbjct 18004 GAACATGTCCCTTGCGCGGACCTCTTCTTTGCCAGTGTTCTTTTTTAGATCCAAAAACTC 18063 Query 154019 ATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCC 154075 | | | || | ||||| || || | |||| || | ||| || ||| || || Sbjct 18064 AAATACATCCCCATGCCATGGCTCCAGATAGATAGCAAAGGCTCCGGGTCGCTTGTTACC 18123 Query 154076 GCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCT 154135 || || || || | || | |||| ||| ||||||||| ||| ||| | | ||| | Sbjct 18124 TCCTTGGTCAACATAACGTGCAGTATTATTGTAGACGCGCAGCATCGGTACTAAACCGTT 18183 Query 154136 TGCGGTGC----CGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGT 154191 | | | |||| | ||| || || || ||| ||| || || | Sbjct 18184 CGAAATACCATTCGTTCCTGCAATATATGTTCCTTTCGCCCTAATGCA----GTGTACAT 18239 Query 154192 TAACGCCAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAG 154250 | | ||| ||||| || |||| | || || || || || | || || ||| Sbjct 18240 TCAGGCCTATGCCACCAGCCG-ATTTAGAGATCAAGGCACACTGTTTAAGAGTATCGTAA 18298 Query 154251 ATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATG 154310 || || |||||||||||||| | ||||| ||| || || ||| |||||| Sbjct 18299 ATTCCCTCGATGCTATCGTCCGACATTGTGAGCAGGAAGCAGGACGACAGTTGCGGCCGT 18358 Query 154311 CGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCT--CATCA 154368 | ||| | || | ||| | ||| || |||||||||| ||| | || || || Sbjct 18359 TGAGTTGCTGCAGCAAACATGGTTGGCGAAGCGTGCGTAA--AGTATCGCTCTGACAGCA 18416 Query 154369 TGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCA 154428 |||||| |||||||| || ||||| || || || ||||||| || || |||| Sbjct 18417 AATTGTACGTCTCGATGGCAGAATCAATATCTTCACCATGTATGCCGATAGCAACACGCA 18476 Query 154429 TGAGCATGTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATTTT 154488 |||||||||| ||||| | || | | | | ||| || || |||||| ||| Sbjct 18477 TGAGCATGTGTTGCGGCCTCTCCACAATCTTCCCCTTAATTTTTAACAGATATGATCTTT 18536 Query 154489 CGAGGGTTTTGTAACCGAAATACTTGTATTCAAAATC 154525 | | |||||| |||| || || ||||| |||| || Sbjct 18537 CCAATGTTTTGAAACCAAAGTAATTGTAACCAAAGTC 18573 >seq14 Length=264275 Score = 136 bits (150), Expect = 4e-27 Identities = 297/434 (68%), Gaps = 13/434 (3%) Strand=Plus/Minus Query 52305 CTGCTGAATGCGTTCGAGCACG-TGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAA 52363 ||| | ||||| ||||| ||| |||||||||| ||||| | ||||| ||||| Sbjct 132541 CTGTTCAATGCCATCGAG-ACGCTGCCGTGCGTGAAGCGTAAGGCGGACTGGGCGATGAA 132483 Query 52364 GTGGATCGAGAGCGACACCGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGA 52423 |||||| |||| | | || | | |||||| || ||||| ||||| ||||| Sbjct 132482 CTGGATCTCGAGCAAGAAGGCTAACTACGGCGAGCGTATCGTGGCGTTCGCAGCCGTCGA 132423 Query 52424 GGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAAT 52483 ||| | || || ||||||||||| |||||||| | | || | | ||| | || Sbjct 132422 GGGTATCTTCTTCAGTGGCAGCTTTGCTGCCATCTTCTGGCTAAAGAAGCGTGGCCTGAT 132363 Query 52484 GCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTT 52543 ||| || ||||||||| ||||||| |||| |||||||| ||||| | || ||||| Sbjct 132362 GCCGGGTCTGACGTTCTCCAACGAGCTGATCTCGCGCGATGAAGGTTTACATTGCGACTT 132303 Query 52544 TGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGA- 52602 ||| || ||| | |||| | || || |||| | | || | ||| | | | Sbjct 132302 TGCCTGTCTCATGTTCAAGTATCTGGT-ACAGAAACCATCG---CGCAAACG--CGTAAC 132249 Query 52603 GCATGT--TCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGT 52660 | || | || || || || ||||| ||||||| | ||| || ||||| || Sbjct 132248 GGATATCATCCGTGATGCAGTCATGATCGAGCAGGAGTTCCTGACGAAAGCACTGCCTGT 132189 Query 52661 CGAGCTGCTGGGCATGAA-CGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATC 52719 ||| || |||| ||||| ||| || ||||| ||||||||||||| |||||||||| Sbjct 132188 CGATATGTTGGGTATGAATTGCG-AGCTCATGTCGCAGTACATCGAGTTCGTGGCGGATC 132130 Query 52720 GTCTGTTGGTGCAG 52733 ||||||||||| || Sbjct 132129 GTCTGTTGGTGGAG 132116 >seq673 Length=25255 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459 |||| || | ||| | | | |||||||| || ||||||||||| | ||||| | Sbjct 24425 CGCAGCACAAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCG 24484 Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 ||||| || || || |||| |||| |||||||| || || || || || || || ||| Sbjct 24485 TCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATTCCCTCCTTG 24544 Query 138520 TCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGC 138579 || ||| || || | | || | |||||| | | ||| ||||||| || | Sbjct 24545 TCCTGGATCTTCGCCTTCACATTCTCGATGGTGTCCGATGGCTCGACCTCGAGTGTGATG 24604 Query 138580 GTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || || || || || ||||| || ||||||||||| Sbjct 24605 GTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 24639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496248628718400