Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq372 138 1e-27 >seq372 Length=50997 Score = 138 bits (152), Expect = 1e-27 Identities = 284/412 (69%), Gaps = 8/412 (2%) Strand=Plus/Plus Query 10441 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCACAAAATGAGGAG 10500 || |||||||| |||| ||| ||| || ||||| || | || || || ||| | Sbjct 39728 TACCAAGCATCCACCTCCGAGCTGTACGGCAAAGTGGTCGAGACACCCCAGAACGAGAAA 39787 Query 10501 ACGCCCTTCTATCCACGATCCGTCTATGGCGTCT-CAAAGGT-TGCGGCACATTGGCTCG 10558 || ||||||||||| || || |||| | | | | ||| | | ||| | | ||| ||| Sbjct 39788 ACTCCCTTCTATCCCCGCTCGCCGTATG-CATGTGCCAAGATGTACGG-ATACTGGATCG 39845 Query 10559 TGAAGAATTATCGCGAATCCTATGGTCTCTTTGTGTGCTCCGGTATTCTCTTCAACCACG 10618 ||| ||||| ||||| | || | | | |||| ||| ||| ||||| |||||||| | Sbjct 39846 TGATCAATTACCGCGAGGCGTACGATATGTTTGCCTGCAACGGGATTCTGTTCAACCATG 39905 Query 10619 AGTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCAC-CGAT-GGTATCAAACA 10676 | || ||||| || || | |||| ||||| |||||||| || | ||| | || | Sbjct 39906 AATCGCCCCGACGCGGAGAGAATTTTGTGACCCGTAAGATCACTCGTTCGGTCGCGAAGA 39965 Query 10677 AATCGTGGCGGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACTG 10736 |||| |||| || ||| | | | || |||| || ||| | || || | ||||| Sbjct 39966 TATCGCT-CGGGC-AGCAGGAATGCGTCGAGCTGGGTAATCTCGATTCCAAGCGAGACTG 40023 Query 10737 GGGACACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTCCAACAAGAAGAGGCGGA 10796 ||| ||||| ||||||||||| || || |||||||| | | || || || | |||| Sbjct 40024 GGGTCACGCGAAGGACTATGTGGAGGCGATGTGGCTGATGATGCAGCAGGAGAAACCGGA 40083 Query 10797 CGAATATGTCGTCGCGACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAG 10848 || | |||| | || || || |||||||| || || | |||||||| ||| Sbjct 40084 AGACTTTGTCATTGCCACCGGCGAGACACATTCGGTGCGCGAGTTCGTGGAG 40135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613490175175200