Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq14 228 8e-55 seq673 154 1e-32 seq966 107 2e-18 seq610 102 8e-17 >seq14 Length=264275 Score = 228 bits (252), Expect = 8e-55 Identities = 298/410 (73%), Gaps = 2/410 (0%) Strand=Plus/Plus Query 132730 TCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGCACC 132789 || ||||||||||||||||| ||||||||| |||||||| | |||| || | || Sbjct 132132 TCCGCCACGAACTCGATGTACTGCGACATGAGCTCGCAATTCATACCCAACATATCGACA 132191 Query 132790 GGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTA 132849 ||||| |||| || || || |||||||| ||| || || || ||| ||| | Sbjct 132192 GGCAGTGCTTTCGTCAGGAACTCCTGCTCGATCATGACTGCATCACGGATGATATCCGTT 132251 Query 132850 ACGCGCGC-CGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCA 132908 ||||| |||| | || || |||| || ||||||||| | || ||||||||||| Sbjct 132252 ACGCGTTTGCGCGAT-GGTTTCTGTACCAGATACTTGAACATGAGACAGGCAAAGTCGCA 132310 Query 132909 ATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCC 132968 ||| || || || || | || || || |||||| ||| |||| || ||||| ||||| Sbjct 132311 ATGTAAACCTTCATCGCGCGAGATCAGCTCGTTGGAGAACGTCAGACCCGGCATCAGGCC 132370 Query 132969 GCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGC 133028 || || || ||||| || ||||| || || ||||| ||||||| ||||||||||| Sbjct 132371 ACGCTTCTTTAGCCAGAAGATGGCAGCAAAGCTGCCACTGAAGAAGATACCCTCGACGGC 132430 Query 133029 CGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGC 133088 ||||| ||||| | ||||||||| | | || | ||||| | ||||||| || ||| Sbjct 132431 TGCGAACGCCACGATACGCTCGCCGTAGTTAGCCTTCTTGCTCGAGATCCAGTTCATCGC 132490 Query 133089 CCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACA 133138 ||| || ||||| || |||||||||| ||| |||||||| || |||| Sbjct 132491 CCAGTCCGCCTTACGCTTCACGCACGGCAGCGTCTCGATGGCATTGAACA 132540 Score = 165 bits (182), Expect = 8e-36 Identities = 196/265 (74%), Gaps = 8/265 (3%) Strand=Plus/Plus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 |||||||||||| || ||| |||||||| ||||||||| ||||| ||||| || || Sbjct 132641 GTAGGTGTCGATAAGAAGCGAGTACATTTCGCTGTGTACGTTTTCCATCGCGATCTGGAA 132700 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286 || || || || || ||||| |||||| || || || ||| || || |||||||| Sbjct 132701 ACCATAGAAACAGCGGGCCTCCGTCACCTGTACCTCCTGGCTGAACCGTTCAACCAGATT 132760 Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346 |||||| || || || || ||| ||||| ||||| ||||||||| ||||||||| || Sbjct 132761 TTCGTTCACAATACCATCCGAGGCAGCGAAGAAGGCGAGCACGTGCGAGATGAAATGACG 132820 Query 133347 ----CTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCT 133402 |||| | || | || |||||||| | ||||||| || || |||||||| | Sbjct 132821 TTCACTCGGTTTCAGTGAA----TCCCAGTCTTTCATGTCCTTTGAGAGATCCACCTCTT 132876 Query 133403 CGACGGTCCAAAACGACGCCTCGGC 133427 |||| ||||| || || || ||||| Sbjct 132877 CGACCGTCCAGAAAGAAGCTTCGGC 132901 >seq673 Length=25255 Score = 154 bits (170), Expect = 1e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 |||||||| || ||||| ||||||||||| ||||| |||||||| |||| |||||| | Sbjct 24642 AAAATGCAGATTTTCGTGAAAACGCTCACCGGCAAGACCATCACACTCGAGGTCGAGCCA 24583 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | | | | || | || |||| ||||| |||||||| ||| | || Sbjct 24582 TCGGACACCATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCCCCAGAT 24523 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| || || | ||| ||||| |||||||| |||| || ||||| |||||| Sbjct 24522 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGTACCCTTTCGGACTAC 24463 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||||| ||||| |||| |||||| | |||||||| Sbjct 24462 AACATCCAGAAGGAGTCGACCCTGCATCTTGTGCTGCG 24425 >seq966 Length=353950 Score = 107 bits (118), Expect = 2e-18 Identities = 156/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || || || || || || ||||||||| | || |||||| | | Sbjct 223 AATGCAGATTTTCGTGAAGACCCTGACAGGAAAGACCATCACCCTGGAGGTCGAGCCATC 282 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 ||| | | | |||| | || | || || | || || || || ||||| | || | Sbjct 283 CGATACAATTGAGAACG-TGAAGGCTAAGATTCAGGATAAGGAAGGCATTCCTCCAGATC 341 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | ||| || || |||||||| || | || || || |||||||| Sbjct 342 AGCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGTACGCTGTCCGACTACA 401 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||||||||| |||| || ||| | ||||| ||| Sbjct 402 ACATCCAAAAGGAATCGACTCTCCATCTAGTGCTCCGT 439 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 38250 ATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACA-G 38308 || ||||| || || || || || || |||||||| | || |||||| | |||| | | Sbjct 2 ATTTTCGTGAAGACCCTGACAGGAAAGACCATCACTCTGGAGGTCGAGCCATCCGATACG 61 Query 38309 CGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCG 38368 || |||| | || | || || | || || || || || || | || || ||||| Sbjct 62 ATTGAGAACG-TGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCCAGATCAGCAGCG 120 Query 38369 GCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCA 38428 || || | ||| || || |||||||| || | || || || |||||||||||| || Sbjct 121 TCTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGTACTCTGTCCGACTACAACATTCA 180 Query 38429 AAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| |||| || ||| ||||||| ||| Sbjct 181 GAAGGAATCGACTCTCCATCTGGTGCTCCGT 211 >seq610 Length=159711 Score = 102 bits (112), Expect = 8e-17 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || || || || || |||||||| | || |||||| | Sbjct 159114 AATATGCAGATTTTCGTGAAGACCCTGACAGGAAAGACCATCACTCTGGAGGTCGAGCCA 159173 Query 38301 ACCGACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 |||| | | || |||| | || | || || | || || || || || || | || Sbjct 159174 TCCGATACGATTGAGAACG-TGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCCAGA 159232 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 || ||||| || || | ||| || || |||||||| || | || || || |||||| Sbjct 159233 TCAGCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGTACTCTGTCCGACTA 159292 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||| |||||| |||| || ||| ||||||| ||| Sbjct 159293 CAACATCCAGAAGGAATCGACTCTCCATCTGGTGCTCCGT 159332 Score = 102 bits (112), Expect = 8e-17 Identities = 155/218 (71%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || || || || || || |||||||| | || |||||| | | Sbjct 159344 AATGCAGATTTTCGTGAAGACCCTGACAGGAAAGACCATCACTCTGGAGGTCGAGCCATC 159403 Query 38303 CGACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 ||| | | || |||| | || | || || | || || || || || || | || | Sbjct 159404 CGATACGATTGAGAACG-TGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCCAGATC 159462 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | ||| || || |||||||| || | || || || |||||||| Sbjct 159463 AGCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGTACTCTGTCCGACTACA 159522 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||| |||||| |||| || ||| |||| |||||| Sbjct 159523 ACATCCAGAAGGAATCGACTCTCCATCTGGTACTGCGT 159560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500158920204800