Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq50 105 3e-17 seq811 102 3e-16 seq1543 96.9 1e-14 seq1457 96.9 1e-14 seq1004 96.9 1e-14 seq966 91.5 6e-13 seq610 89.7 2e-12 >seq50 Length=143579 Score = 105 bits (116), Expect = 3e-17 Identities = 337/517 (65%), Gaps = 37/517 (7%) Strand=Plus/Minus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCA 452050 || || ||||||||||| ||||| ||||||||||| ||||| || || || || | Sbjct 56685 AACCCCGATGAAGCTGTCGCATACGGTGCTGCAGTACAAGCGGCAAT-CTTGCA-----A 56632 Query 452051 GATGATGAAAAATTAGGAG----------ATATTCTGTTAGTAGATGTAACACCTCTATC 452100 | |||| | || |||| || | || || | ||||| || || || || Sbjct 56631 GGTGAT----ACTTCGGAGGCGGTCCAGGATTTACTTTTGTTGGATGTCACGCCACTGTC 56576 Query 452101 TCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTAT 452160 | ||| | ||||| ||||| ||| | ||||| | | || || ||| || | || Sbjct 56575 ATTAGGAATCGAAACGGCTGGAGGAGTAATGACCGTTCTGATCAAGCGAAATACCACGAT 56516 Query 452161 TCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAAGT--GATAACCAACCAGGTGTAACT 452218 || || | | |||||||| | ||| | | | || || ||||| || || Sbjct 56515 ACCGACGAAGCAAACCCAAACATTCACTAC--CTACTCGGACAATCAACCTGGCGTTCTG 56458 Query 452219 ATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTT 452278 |||||||| |||||||||||||| || ||||| ||| || ||| || ||| ||||| Sbjct 56457 ATTCAAGTCTTTGAAGGAGAACGGGCCATGACGAAAGACAACAATCTTCTTGGAAAATTT 56398 Query 452279 --ACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATG 452336 |||| | ||||| ||| || | ||| || || |||||| | || | | Sbjct 56397 GAACTCAGT--GGTATTCCACCTGCTCCGCGCGGAGTGCCACAGATTGAAGTCACATTCG 56340 Query 452337 ATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAG 452396 || ||||||| || ||||| | ||||| ||| |||| ||||| || || || Sbjct 56339 ATATTGATGCCAACGGTATCATGAATGTATCTGCTATTGAGAAATCGACT---AACAAAG 56283 Query 452397 AAAA---AATTACAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAA 452453 |||| || ||||| ||||| ||||| ||| || |||||| || || || | Sbjct 56282 AAAATCGTATCACAATCACTAACGATAAGGGACGTCTAAGTAAAGAGGACATAGATCGTA 56223 Query 452454 TGGTAGATGAAGCAGAAAAATT---CAAGGATGATGA 452487 |||| |||| || ||||| || ||| || ||||| Sbjct 56222 TGGTGAATGAGGCGGAAAAGTTCCGCAACGAGGATGA 56186 >seq811 Length=33849 Score = 102 bits (112), Expect = 3e-16 Identities = 160/228 (70%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 451232 AAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCA 451291 ||||| |||||||| || ||||| || ||||| | || || ||||||||||| || Sbjct 359 AAAACCTTTGCTCCCGAGGAAATCAGTTCGATGGTGTTGACGAAGATGAAAGAAACCGCC 418 Query 451292 GAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAAT 451351 ||| || | ||| |||| | | ||||| || || || || || |||||||| Sbjct 419 GAAGCCTACTTAGGTCAGTCAGTGAAGAACGCAGTCATCACGGTACCAGCCTATTTCAAC 478 Query 451352 GATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGA 451411 || ||||| || || || || ||||| ||| || |||||||| ||||| | || Sbjct 479 GACAGTCAACGACAGGCCACAAAGGATGCTGGAGCCATCGCTGGTTTGAATGTGATGCGC 538 Query 451412 ATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGaaaa 451459 ||||| || ||||| || || || ||||| || || || || ||| || Sbjct 539 ATTATCAACGAACCAACGGCTGCAGCTCTGGCGTACGG-CTTGGATAA 585 >seq1543 Length=21404 Score = 96.9 bits (106), Expect = 1e-14 Identities = 159/228 (70%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 451232 AAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCA 451291 ||||| |||||||| || ||||| || ||||| | || || ||||||||||| || Sbjct 21046 AAAACCTTTGCTCCCGAGGAAATCAGTTCGATGGTGTTGACGAAGATGAAAGAAACCGCC 20987 Query 451292 GAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAAT 451351 ||| || | ||| |||| | | ||||| || || || || || || ||||| Sbjct 20986 GAAGCCTACTTGGGTCAGTCAGTGAAGAACGCAGTCATCACGGTGCCAGCCTACTTCAAC 20927 Query 451352 GATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGA 451411 || ||||| || || || || ||||| ||| || |||||||| ||||| | || Sbjct 20926 GACAGTCAACGACAGGCCACAAAGGATGCTGGAGCCATCGCTGGTTTGAATGTGATGCGC 20867 Query 451412 ATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGaaaa 451459 ||||| || ||||| || || || ||||| || || || || ||| || Sbjct 20866 ATTATCAACGAACCAACGGCTGCAGCTCTGGCGTACGG-CTTGGATAA 20820 >seq1457 Length=10361 Score = 96.9 bits (106), Expect = 1e-14 Identities = 159/228 (70%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 451232 AAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCA 451291 ||||| |||||||| || ||||| || ||||| | || || ||||||||||| || Sbjct 9628 AAAACCTTTGCTCCGGAGGAAATCAGTTCGATGGTGTTGACGAAGATGAAAGAAACCGCC 9569 Query 451292 GAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAAT 451351 ||| || | ||| |||| | | ||||| || || || || || || ||||| Sbjct 9568 GAAGCCTACTTAGGTCAGTCAGTGAAGAACGCAGTCATCACGGTGCCAGCCTACTTCAAC 9509 Query 451352 GATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGA 451411 || ||||| || || || || ||||| ||| || |||||||| ||||| | || Sbjct 9508 GACAGTCAACGACAGGCCACAAAGGATGCTGGAGCCATCGCTGGTTTGAATGTGATGCGC 9449 Query 451412 ATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGaaaa 451459 ||||| || ||||| || || || ||||| || || || || ||| || Sbjct 9448 ATTATCAACGAACCAACGGCTGCAGCTCTGGCGTACGG-CTTGGATAA 9402 >seq1004 Length=88306 Score = 96.9 bits (106), Expect = 1e-14 Identities = 159/228 (70%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 451232 AAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCA 451291 ||||| |||||||| || ||||| || ||||| | || || ||||||||||| || Sbjct 900 AAAACCTTTGCTCCCGAGGAAATCAGTTCGATGGTGTTGACGAAGATGAAAGAAACCGCC 959 Query 451292 GAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAAT 451351 ||| || | ||| |||| | | ||||| || || || || || || ||||| Sbjct 960 GAAGCCTACTTGGGTCAGTCAGTGAAGAACGCAGTCATCACGGTGCCAGCCTACTTCAAC 1019 Query 451352 GATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGA 451411 || ||||| || || || || ||||| ||| || |||||||| ||||| | || Sbjct 1020 GACAGTCAACGACAGGCCACAAAGGATGCTGGAGCCATCGCTGGTTTGAATGTGATGCGC 1079 Query 451412 ATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGaaaa 451459 ||||| || ||||| || || || ||||| || || || || ||| || Sbjct 1080 ATTATCAACGAACCAACGGCTGCAGCTCTGGCGTACGG-CTTGGATAA 1126 >seq966 Length=353950 Score = 91.5 bits (100), Expect = 6e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 391056 ATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAAC 391115 |||||||| || || ||||| || || || || ||||| || || || |||| |||| Sbjct 2 ATTTTCGTGAAGACCCTGACAGGAAAGACCATCACTCTGGAGGTCGAGCCATCCGATACG 61 Query 391116 ATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGT 391175 ||||| | || || ||||| ||||||||||| || ||||| ||||| || ||| Sbjct 62 ATTGAGAACGTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCCAGATCAGCAGCGT 121 Query 391176 TTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGAT 391235 | || ||| | || || || || || ||||| | ||| || | || || || ||| | Sbjct 122 CTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGTACTCTGTCCGACTACAACATTCAG 181 Query 391236 AAGGA 391240 ||||| Sbjct 182 AAGGA 186 Score = 86.0 bits (94), Expect = 2e-11 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| || || ||||| || || || || || || || || || |||| Sbjct 223 AATGCAGATTTTCGTGAAGACCCTGACAGGAAAGACCATCACCCTGGAGGTCGAGCCATC 282 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| ||||| | || || ||||| ||||||||||| |||||||| ||||| Sbjct 283 CGATACAATTGAGAACGTGAAGGCTAAGATTCAGGATAAGGAAGGCATTCCTCCAGATCA 342 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || ||| | || ||| | || || || || || ||||| | || || | || || || Sbjct 343 GCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGTACGCTGTCCGACTACAA 402 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || || || |||| Sbjct 403 CATCCAAAAGGAATCGACTCTCCATCTAGT 432 >seq610 Length=159711 Score = 89.7 bits (98), Expect = 2e-12 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| || || ||||| || || || || ||||| || || || |||| Sbjct 159344 AATGCAGATTTTCGTGAAGACCCTGACAGGAAAGACCATCACTCTGGAGGTCGAGCCATC 159403 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| ||||| | || || ||||| ||||||||||| || ||||| ||||| Sbjct 159404 CGATACGATTGAGAACGTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCCAGATCA 159463 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || ||| | || ||| | || || || || || ||||| | ||| || | || || || Sbjct 159464 GCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGTACTCTGTCCGACTACAA 159523 Query 391229 TATTGATAAGGA 391240 || | ||||| Sbjct 159524 CATCCAGAAGGA 159535 Score = 87.8 bits (96), Expect = 7e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || ||||| || || || || ||||| || || || |||| Sbjct 159117 ATGCAGATTTTCGTGAAGACCCTGACAGGAAAGACCATCACTCTGGAGGTCGAGCCATCC 159176 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | || || ||||| ||||||||||| || ||||| ||||| Sbjct 159177 GATACGATTGAGAACGTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCCAGATCAG 159236 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || || || || || ||||| | ||| || | || || || Sbjct 159237 CAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGTACTCTGTCCGACTACAAC 159296 Query 391230 ATTGATAAGGA 391240 || | ||||| Sbjct 159297 ATCCAGAAGGA 159307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975662203159760