Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq372 149 8e-31 seq1047 145 9e-30 >seq372 Length=50997 Score = 149 bits (164), Expect = 8e-31 Identities = 278/402 (69%), Gaps = 6/402 (1%) Strand=Plus/Plus Query 13593 CGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAAC 13652 ||| |||| ||||| || | || ||| ||| || || || ||| |||| || ||| Sbjct 39722 CGCTTCTACCAAGCATCCACCTCCGAGCTGTACGGCAAAGTGGTCGAGACACCCCAGAAC 39781 Query 13653 GAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGT-TGCGGCACATTG 13711 ||| | || |||||||| || |||||| || | | | ||| | | ||| | | || Sbjct 39782 GAGAAAACTCCCTTCTATCCCCGCTCGCCGTATGCATGTGCCAAGATGTACGG-ATACTG 39840 Query 13712 GCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAA 13771 | |||| | |||||||||||| | |||| ||||||| ||| ||| || || ||||| Sbjct 39841 GATCGTGATCAATTACCGCGAGGCGTACGATATGTTTGCCTGCAACGGGATTCTGTTCAA 39900 Query 13772 CCATGAATCACCGAGACGAGGTGCAGACTTTGTGACCATGAAGATTAC-CG-AGGGTATC 13829 ||||||||| || |||| || | | ||||||||| ||||| || || ||| | Sbjct 39901 CCATGAATCGCCCCGACGCGGAGAGAATTTTGTGACCCGTAAGATCACTCGTTCGGTCGC 39960 Query 13830 AAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGA 13889 || | ||| | || | |||| | | | || ||||||| | | | || || Sbjct 39961 GAAGATATC--GCTCGGGCAGCAGGAATGCGTCGAGCTGGGTAATCTCGATTCCAAGCGA 40018 Query 13890 GATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAA 13949 || ||||||||||||||||||||||| || || |||||||| ||| | || || ||| || Sbjct 40019 GACTGGGGTCACGCGAAGGACTATGTGGAGGCGATGTGGCTGATGATGCAGCAGGAGAAA 40078 Query 13950 GCCGACGAATATGTAGTAGCAACGGGTGAGACCCATTCAGTG 13991 | || || | ||| | || || || ||||| ||||| ||| Sbjct 40079 CCGGAAGACTTTGTCATTGCCACCGGCGAGACACATTCGGTG 40120 >seq1047 Length=31309 Score = 145 bits (160), Expect = 9e-30 Identities = 769/1219 (63%), Gaps = 18/1219 (1%) Strand=Plus/Minus Query 111619 ACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGA 111678 ||||| ||||||| || || ||||| || ||||| |||||||||||||||| | |||| Sbjct 18485 ACATGCTCATGCGTGTTGCTATCGGCATACATGGTGAAGATATTGATTCTGCCATCGAGA 18426 Query 111679 CATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCT 111737 | ||| | | |||| | | || || | ||||| | |||||| | || || Sbjct 18425 CGTACAATTTGCTGTCAGAGCGATACTTT-ACGCACGCTTCGCCAACCATGTTTGCTGCA 18367 Query 111738 GGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATC 111797 | || | | | || ||| |||| || ||||| | ||| ||| ||| ||| Sbjct 18366 GCAACTCAACGGCCGCAACTGTCGTCCTGCTTCCTGCTCACAATGTCGGACGATAGCATC 18307 Query 111798 AATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATC 111857 | || ||||||| ||||| | | |||||| ||||| || | ||||||||| || Sbjct 18306 GAGGGAATTTACGATACTCTTAAACAGTGTGCCTTGATCTCTAAATCGGCTGGTGGCATA 18247 Query 111858 GGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAATGGTCAA 111917 || || | | || | || || || | |||| ||| || |||||| Sbjct 18246 GGCCTGAATGTACACTGCATTAGGGCGAAAGGAACATATATTGCAGGAACGAATGGTATT 18187 Query 111918 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAA 111977 || | ||| | | || ||||| ||||| | || || || || ||||| ||||| Sbjct 18186 TCGAACGGTTTAGTACCGATGCTGCGCGTCTACAATAATACTGCACGTTATGTTGACCAA 18127 Query 111978 GCTGGGCGTCGCAAG------GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGAT 112031 | || | |||| ||| | | || ||||||| ||||||||||| | |||| Sbjct 18126 GGAGG---TAACAAGCGACCCGGAGCCTTTGCTATCTATCTGGAGCCATGGCATGGGGAT 18070 Query 112032 ATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGAT 112091 | | ||||| | || | ||| || | || |||| || | || Sbjct 18069 GTATTTGAGTTTTTGGATCTAAAAAAGAACACTGGCAAAGAAGAGGTCCGCGCAAGGGAC 18010 Query 112092 CTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAAT 112151 | |||| ||| || |||||||| ||| | |||||| || | || || | | | | Sbjct 18009 ATGTTCTACGCGCTGTGGATTCCTGATTTGTTCATGCAGCGTGTGGAAGCCAACGAAATG 17950 Query 112152 TGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTT 112211 ||| ||| | || || || | || || | || || | |||||||||||| Sbjct 17949 TGGAGTCTAATGTGCCCTCACGACTGTCCTGGATTGTCGGAGACATGGGGTGAGGAGTTC 17890 Query 112212 GAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACG-GTGCCAGCTGC 112270 ||| |||||||| |||||| || |||| || || | || || Sbjct 17889 GAAAAACTCTACACTGGCTACGAGCGCGAGGGTCGTTTCACC-CGTCAAGTAAAGGCACA 17831 Query 112271 CGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTA 112330 ||| | ||| || ||| | | || || || ||||| || || |||||||| Sbjct 17830 AGATTTATGGTTCGCAATTATAGAATCACAGGTTGAAACTGGAGTGCCTTACATGCTTTA 17771 Query 112331 CAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAA 112390 |||||| || || || | |||||||| || | ||| | || ||||||| |||| || Sbjct 17770 CAAAGATGCGTGCAATCGTAAGAGTAACCAGCAAAATATCGGAACGATCAAGTGTTCAAA 17711 Query 112391 CCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGC 112450 ||| || || ||||| | |||| | |||||||| | |||||||||||||| || Sbjct 17710 CCTGTGCACCGAAATTGTAGAATACTCTTCAAAAGATGAAATTGCTGTGTGTAACCTGGC 17651 Query 112451 ATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACT 112510 || || || | || || |||| | || || |||| ||||| | ||| || Sbjct 17650 CTCGATTGCCTTAAACATGTTTGTGAAACCCGA---TCGTACATATGATTTCGCAAAGCT 17594 Query 112511 CCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTA 112570 | ||||| | |||||||| || || || || |||| | | || |||| ||||| ||| Sbjct 17593 AAAGGAAGTAGCCAAAACTGTTACTAAGAATCTTAACAAAATCATCGATATAAATTATTA 17534 Query 112571 CCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCA 112630 || ||| | || ||| |||||| | |||||||| || || |||| || || Sbjct 17533 TCCTGTTCCGGAAGCAAAGCGATCCAATATGCGCCACCGTCCGATAGGGATCGGAGTGCA 17474 Query 112631 AGGTCTCGCGGATGTATTCATTCTTTGT-CGCCACGCATTTGATTCCGACGAAGCGAAGG 112689 ||| | || |||| |||| |||| | |||||| | | || || ||||| || Sbjct 17473 AGGCATGGCAGATGCTTTCA-TCTTGATGCGCCACCCTTACGAAAGTGAAGAAGCCCAGC 17415 Query 112690 AAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGT 112749 | ||| | || ||||| || || || || || ||||| ||||| | || | Sbjct 17414 TGTTGAATCAACAAATGTTTGAAACCATTTACTTCGGAGCCCTTGAAGCGAGCTGCGAAT 17355 Query 112750 TGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGC 112809 |||| | ||||||||||| ||| | | ||| || ||||| | |||| | | Sbjct 17354 TGGCCGCACAGGATGGTCCATACGAATCATATGATGGAAGTCCAGTTAGCAAAGGAATCC 17295 Query 112810 TTCAATTTGATATGTGGGA 112828 |||| | || |||||||| Sbjct 17294 TTCAGTACGACATGTGGGA 17276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620725174398400