Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1047 179 4e-40 seq372 145 9e-30 >seq1047 Length=31309 Score = 179 bits (198), Expect = 4e-40 Identities = 737/1157 (64%), Gaps = 14/1157 (1%) Strand=Plus/Plus Query 106169 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 106228 |||||||| |||||||| || |||| | || || ||||||||||| || | |||| Sbjct 17351 GCCAATTCGCAGCTCGCTTCAAGGGCTCCGAAGTAAATGGTTTCAAACATTTGTTGATTC 17410 Query 106229 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 106288 | | || |||||| || || | | || ||| ||| || || |||| || | Sbjct 17411 AACAGCTGGGCTTCTTCACTTTCGTAAGGGTGGCGCATCAAGATGAAAGCATCTGCCATG 17470 Query 106289 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC---A 106345 ||||| || || | || || || | ||| |||||||| || |||| | || | Sbjct 17471 CCTTGCACTCCGATCCCTATCGGACGGTGGCGCATATTGGA---TCGCTTTGCTTCCGGA 17527 Query 106346 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT 106405 || |||||| ||||| | || |||| | ||| ||||| || |||||| | || | | | Sbjct 17528 ACAGGATAATAATTTATATCGATGATTTTGTTAAGATTCTTAGTAACAGTTTTGGCTACT 17587 Query 106406 TCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCG 106465 || | || ||| | ||||| | || ||| || || ||| || | | ||| Sbjct 17588 TCCTTTAGCTTTGCGAAATCATATGTACGA---TCGGGTTTCACAAACATGTTTAAGGCA 17644 Query 106466 ATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTA 106525 || || |||| || || ||||| | ||||| || | ||| |||| |||||| || Sbjct 17645 ATCGAGGCCAGGTTACACACAGCAATTTCATCTTTTGAAGAGTATTCTACAATTTCGGTG 17704 Query 106526 CACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCA 106585 |||| ||| |||| ||| ||||| || | ||| | ||||||||||| ||||||||| Sbjct 17705 CACAGGTTTGAACACTTGATCGTTCCGATATTTTGCTGGTTACTCTTACGATTGCACGCA 17764 Query 106586 TCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCAC 106645 || ||||| |||||||| ||| || || || |||||| | | |||||| ||| Sbjct 17765 TCTTTGTAAAGCATGTAAGGCACTCCAGTTTCAACCTGTGATTCTATAATTGCGAACCAT 17824 Query 106646 ACATCGGCGGCTGGTACAATGGC-GTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAG 106704 | ||| || ||| || | | || || ||||| |||||| |||||||| Sbjct 17825 AAATCTTGTGCCTTTAC-TTGACGGGTGAAACGACCCTCGCGCTCGTAGCCAGTGTAGAG 17883 Query 106705 GGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAG 106764 ||| |||||||||||| | || || | || || | || || || | || Sbjct 17884 TTTTTCGAACTCCTCACCCCATGTCTCCGACAATCCAGGACAGTCGTGAGGGCACATTAG 17943 Query 106765 AGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGA 106824 | ||| | | || || |||| |||||| | || ||||||||||| | | Sbjct 17944 ACTCCACATTTCGTTGGCTTCCACACGCTGCATGAACAAATCAGGAATCCACAGCGCGTA 18003 Query 106825 AAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTC 106884 || | || || || ||||||| | || ||| | || || | ||||| Sbjct 18004 GAACATGTCCCTTGCGCGGACCTCTTCTTTGCCAGTGTTCTTTTTTAGATCCAAAAACTC 18063 Query 106885 CATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCC 106941 | | |||| | ||||||||||| ||||||| || | | ||| ||| || Sbjct 18064 AAATACATCCCCATGCCATGGCTCCAGATAGATAGCAAAGGCTCCGGGTCGCTTGTTACC 18123 Query 106942 AGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATC 107001 |||| | ||||| || || || || | ||||| ||||| || | | ||| | Sbjct 18124 TCCTTGGTCAACATAACGTGCAGTATTATTGTAGACGCGCAGCATCGGTACTAAACCGTT 18183 Query 107002 TGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCAT 107061 || |||||| || || |||| | | || || || | || | | || Sbjct 18184 CGAAATACCATTCGTTCCTGCAATATATGTTCCTTTCGCCCTAATGCAGTGTACATTCAG 18243 Query 107062 CCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACC 107121 || || || |||||| | || ||||| ||||||| ||||||| | || || || Sbjct 18244 GCCTATGCCACCAGCCGATTTAGAGATCAAGGCACACTGTTTAAGAGTATCGTAAATTCC 18303 Query 107122 GTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGT 107181 | ||| || ||| | | || |||||||| |||| ||||| | | | || Sbjct 18304 CTCGATGCTATCGTCCGACATTGTGAGCAGGAAGCAGGACGACAGTTGCGGCCGTTGAGT 18363 Query 107182 ACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTA 107241 | ||| || | |||||| | ||||| | || | | |||| | | ||| Sbjct 18364 TGCTGCAGCAAACATGGTTGGCGAAGCGTGCGTAAAGTATCGCTCTGACAGCAAATTGTA 18423 Query 107242 TGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACAT 107301 ||||| | | |||||||||| ||||| || || |||||||| || |||||||| | ||| Sbjct 18424 CGTCTCGATGGCAGAATCAATATCTTCACCATGTATGCCGATAGCAACACGCATGAGCAT 18483 Query 107302 GTATTGGGGTGTTTCCA 107318 || ||| || | |||| Sbjct 18484 GTGTTGCGGCCTCTCCA 18500 >seq372 Length=50997 Score = 145 bits (160), Expect = 9e-30 Identities = 277/402 (69%), Gaps = 6/402 (1%) Strand=Plus/Plus Query 6900 CGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAAC 6959 ||| |||| ||||| || |||| ||| ||| || || || ||| |||| || ||| Sbjct 39722 CGCTTCTACCAAGCATCCACCTCCGAGCTGTACGGCAAAGTGGTCGAGACACCCCAGAAC 39781 Query 6960 GAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGT-TGCGGCACATTG 7018 ||| | || |||||||| || |||||| || | | | ||| | | ||| | | || Sbjct 39782 GAGAAAACTCCCTTCTATCCCCGCTCGCCGTATGCATGTGCCAAGATGTACGG-ATACTG 39840 Query 7019 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 7078 | |||| | |||||||||||| | |||| ||||||| ||| ||| || || ||||| Sbjct 39841 GATCGTGATCAATTACCGCGAGGCGTACGATATGTTTGCCTGCAACGGGATTCTGTTCAA 39900 Query 7079 CCATGAATCACCGAGACGAGGTGCAGACTTTGTCACAAAGAAGATTAC-CG-AGGGTATC 7136 ||||||||| || |||| || | | ||||| || ||||| || || ||| | Sbjct 39901 CCATGAATCGCCCCGACGCGGAGAGAATTTTGTGACCCGTAAGATCACTCGTTCGGTCGC 39960 Query 7137 AAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGA 7196 || | ||| | || | |||| | | | || ||||||| | | | || || Sbjct 39961 GAAGATATC--GCTCGGGCAGCAGGAATGCGTCGAGCTGGGTAATCTCGATTCCAAGCGA 40018 Query 7197 GATTGGGGTCACGCGAAGGACTATGTTGAAGCCATGTGGCTCATGCTTCAACAAGAGGAA 7256 || ||||||||||||||||||||||| || || |||||||| ||| | || || ||| || Sbjct 40019 GACTGGGGTCACGCGAAGGACTATGTGGAGGCGATGTGGCTGATGATGCAGCAGGAGAAA 40078 Query 7257 GCCGACGAATATGTAGTAGCAACGGGTGAGACCCATTCAGTG 7298 | || || | ||| | || || || ||||| ||||| ||| Sbjct 40079 CCGGAAGACTTTGTCATTGCCACCGGCGAGACACATTCGGTG 40120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589964428032800