Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq1047 179 4e-40
seq372 145 9e-30
>seq1047
Length=31309
Score = 179 bits (198), Expect = 4e-40
Identities = 737/1157 (64%), Gaps = 14/1157 (1%)
Strand=Plus/Plus
Query 106169 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 106228
|||||||| |||||||| || |||| | || || ||||||||||| || | ||||
Sbjct 17351 GCCAATTCGCAGCTCGCTTCAAGGGCTCCGAAGTAAATGGTTTCAAACATTTGTTGATTC 17410
Query 106229 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 106288
| | || |||||| || || | | || ||| ||| || || |||| || |
Sbjct 17411 AACAGCTGGGCTTCTTCACTTTCGTAAGGGTGGCGCATCAAGATGAAAGCATCTGCCATG 17470
Query 106289 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC---A 106345
||||| || || | || || || | ||| |||||||| || |||| | || |
Sbjct 17471 CCTTGCACTCCGATCCCTATCGGACGGTGGCGCATATTGGA---TCGCTTTGCTTCCGGA 17527
Query 106346 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT 106405
|| |||||| ||||| | || |||| | ||| ||||| || |||||| | || | | |
Sbjct 17528 ACAGGATAATAATTTATATCGATGATTTTGTTAAGATTCTTAGTAACAGTTTTGGCTACT 17587
Query 106406 TCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCG 106465
|| | || ||| | ||||| | || ||| || || ||| || | | |||
Sbjct 17588 TCCTTTAGCTTTGCGAAATCATATGTACGA---TCGGGTTTCACAAACATGTTTAAGGCA 17644
Query 106466 ATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTA 106525
|| || |||| || || ||||| | ||||| || | ||| |||| |||||| ||
Sbjct 17645 ATCGAGGCCAGGTTACACACAGCAATTTCATCTTTTGAAGAGTATTCTACAATTTCGGTG 17704
Query 106526 CACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCA 106585
|||| ||| |||| ||| ||||| || | ||| | ||||||||||| |||||||||
Sbjct 17705 CACAGGTTTGAACACTTGATCGTTCCGATATTTTGCTGGTTACTCTTACGATTGCACGCA 17764
Query 106586 TCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCAC 106645
|| ||||| |||||||| ||| || || || |||||| | | |||||| |||
Sbjct 17765 TCTTTGTAAAGCATGTAAGGCACTCCAGTTTCAACCTGTGATTCTATAATTGCGAACCAT 17824
Query 106646 ACATCGGCGGCTGGTACAATGGC-GTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAG 106704
| ||| || ||| || | | || || ||||| |||||| ||||||||
Sbjct 17825 AAATCTTGTGCCTTTAC-TTGACGGGTGAAACGACCCTCGCGCTCGTAGCCAGTGTAGAG 17883
Query 106705 GGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAG 106764
||| |||||||||||| | || || | || || | || || || | ||
Sbjct 17884 TTTTTCGAACTCCTCACCCCATGTCTCCGACAATCCAGGACAGTCGTGAGGGCACATTAG 17943
Query 106765 AGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGA 106824
| ||| | | || || |||| |||||| | || ||||||||||| | |
Sbjct 17944 ACTCCACATTTCGTTGGCTTCCACACGCTGCATGAACAAATCAGGAATCCACAGCGCGTA 18003
Query 106825 AAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTC 106884
|| | || || || ||||||| | || ||| | || || | |||||
Sbjct 18004 GAACATGTCCCTTGCGCGGACCTCTTCTTTGCCAGTGTTCTTTTTTAGATCCAAAAACTC 18063
Query 106885 CATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCC 106941
| | |||| | ||||||||||| ||||||| || | | ||| ||| ||
Sbjct 18064 AAATACATCCCCATGCCATGGCTCCAGATAGATAGCAAAGGCTCCGGGTCGCTTGTTACC 18123
Query 106942 AGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATC 107001
|||| | ||||| || || || || | ||||| ||||| || | | ||| |
Sbjct 18124 TCCTTGGTCAACATAACGTGCAGTATTATTGTAGACGCGCAGCATCGGTACTAAACCGTT 18183
Query 107002 TGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCAT 107061
|| |||||| || || |||| | | || || || | || | | ||
Sbjct 18184 CGAAATACCATTCGTTCCTGCAATATATGTTCCTTTCGCCCTAATGCAGTGTACATTCAG 18243
Query 107062 CCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACC 107121
|| || || |||||| | || ||||| ||||||| ||||||| | || || ||
Sbjct 18244 GCCTATGCCACCAGCCGATTTAGAGATCAAGGCACACTGTTTAAGAGTATCGTAAATTCC 18303
Query 107122 GTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGT 107181
| ||| || ||| | | || |||||||| |||| ||||| | | | ||
Sbjct 18304 CTCGATGCTATCGTCCGACATTGTGAGCAGGAAGCAGGACGACAGTTGCGGCCGTTGAGT 18363
Query 107182 ACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTA 107241
| ||| || | |||||| | ||||| | || | | |||| | | |||
Sbjct 18364 TGCTGCAGCAAACATGGTTGGCGAAGCGTGCGTAAAGTATCGCTCTGACAGCAAATTGTA 18423
Query 107242 TGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACAT 107301
||||| | | |||||||||| ||||| || || |||||||| || |||||||| | |||
Sbjct 18424 CGTCTCGATGGCAGAATCAATATCTTCACCATGTATGCCGATAGCAACACGCATGAGCAT 18483
Query 107302 GTATTGGGGTGTTTCCA 107318
|| ||| || | ||||
Sbjct 18484 GTGTTGCGGCCTCTCCA 18500
>seq372
Length=50997
Score = 145 bits (160), Expect = 9e-30
Identities = 277/402 (69%), Gaps = 6/402 (1%)
Strand=Plus/Plus
Query 6900 CGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAAC 6959
||| |||| ||||| || |||| ||| ||| || || || ||| |||| || |||
Sbjct 39722 CGCTTCTACCAAGCATCCACCTCCGAGCTGTACGGCAAAGTGGTCGAGACACCCCAGAAC 39781
Query 6960 GAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGT-TGCGGCACATTG 7018
||| | || |||||||| || |||||| || | | | ||| | | ||| | | ||
Sbjct 39782 GAGAAAACTCCCTTCTATCCCCGCTCGCCGTATGCATGTGCCAAGATGTACGG-ATACTG 39840
Query 7019 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 7078
| |||| | |||||||||||| | |||| ||||||| ||| ||| || || |||||
Sbjct 39841 GATCGTGATCAATTACCGCGAGGCGTACGATATGTTTGCCTGCAACGGGATTCTGTTCAA 39900
Query 7079 CCATGAATCACCGAGACGAGGTGCAGACTTTGTCACAAAGAAGATTAC-CG-AGGGTATC 7136
||||||||| || |||| || | | ||||| || ||||| || || ||| |
Sbjct 39901 CCATGAATCGCCCCGACGCGGAGAGAATTTTGTGACCCGTAAGATCACTCGTTCGGTCGC 39960
Query 7137 AAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGA 7196
|| | ||| | || | |||| | | | || ||||||| | | | || ||
Sbjct 39961 GAAGATATC--GCTCGGGCAGCAGGAATGCGTCGAGCTGGGTAATCTCGATTCCAAGCGA 40018
Query 7197 GATTGGGGTCACGCGAAGGACTATGTTGAAGCCATGTGGCTCATGCTTCAACAAGAGGAA 7256
|| ||||||||||||||||||||||| || || |||||||| ||| | || || ||| ||
Sbjct 40019 GACTGGGGTCACGCGAAGGACTATGTGGAGGCGATGTGGCTGATGATGCAGCAGGAGAAA 40078
Query 7257 GCCGACGAATATGTAGTAGCAACGGGTGAGACCCATTCAGTG 7298
| || || | ||| | || || || ||||| ||||| |||
Sbjct 40079 CCGGAAGACTTTGTCATTGCCACCGGCGAGACACATTCGGTG 40120
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589964428032800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |