Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq1921 93.3 5e-14 >seq1921 Length=88845 Score = 93.3 bits (102), Expect = 5e-14 Identities = 167/244 (68%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 159536 AACTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCA 159595 ||||||| ||| | ||| |||| |||||||| || | ||| | || || ||| || Sbjct 40872 AACTGTCCTGTCTGATGCTTACCTATCCATCGACGAACGGTATCTTCGAGGATAACGTCG 40931 Query 159596 GACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATC 159655 || | ||| | | || || || | ||||| || || || |||||||||||||| Sbjct 40932 TGGAGGTGTGTGACCTGGTGCACAAGCACGGTGGCCAAGTGTACCTTGATGGTGCAAACA 40991 Query 159656 TAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAA 159715 | || |||||||| ||||| |||| | |||| || ||||||| ||| | | Sbjct 40992 TGAACGCACAGGTGGGTCTCTGCCGACCAGGCGACTTCGGAAGCGATGTATCGCATTTGA 41051 Query 159716 ACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTG 159775 || | |||||||| ||||| ||||| || || || || || || || | || || || | Sbjct 41052 ACCTGCATAAGACGTTCTGCATTCCCCACGGGGGCGGTGGCCCAGGAATGGGACCGATCG 41111 Query 159776 GTGT 159779 | || Sbjct 41112 GAGT 41115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588034881579200