Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq966 149 1e-30
seq610 140 7e-28
seq122 134 3e-26
seq111 134 3e-26
seq673 118 2e-21
>seq966
Length=353950
Score = 149 bits (164), Expect = 1e-30
Identities = 159/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || ||||| || || ||||| || ||||| |||| || || | ||||| ||
Sbjct 432 ACTAGATGGAGAGTCGATTCCTTTTGGATGTTGTAGTCGGACAGCGTACGACCATCCTCC 373
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || ||||||||||| || || || ||||||||||||||||| || || |||
Sbjct 372 AGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGAATGCCTTCCTTATCCTGA 313
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| ||||||||||| || || || || || || ||||| | ||||||
Sbjct 312 ATCTTAGCCTTCACGTTCTCAATTGTATCGGATGGCTCGACCTCCAGGGTGATGGTCTTT 253
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141
||||||| || || ||||| | ||||||
Sbjct 252 CCTGTCAGGGTCTTCACGAAAATCTGCATT 223
Score = 140 bits (154), Expect = 7e-28
Identities = 151/200 (76%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || ||||| || || || ||||| ||||| |||| ||||| | ||||| ||
Sbjct 204 ACCAGATGGAGAGTCGATTCCTTCTGAATGTTGTAGTCGGACAGAGTACGACCATCCTCC 145
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || ||||||||||| || || || |||||||| |||||||| || || |||
Sbjct 144 AGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGGATGCCTTCCTTATCCTGA 85
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| ||||||||||| || || || || || || || || | ||||||
Sbjct 84 ATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGACCTCCAGAGTGATGGTCTTT 25
Query 195112 CCTGTCAAAGTTTTTACGAA 195131
||||||| || || |||||
Sbjct 24 CCTGTCAGGGTCTTCACGAA 5
>seq610
Length=159711
Score = 140 bits (154), Expect = 7e-28
Identities = 157/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || ||||| || || || || || ||||| |||| ||||| | ||||| ||
Sbjct 159553 ACCAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTCC 159494
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || ||||||||||| || || || |||||||| |||||||| || || |||
Sbjct 159493 AGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGGATGCCTTCCTTATCCTGA 159434
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| ||||||||||| || || || || || || || || | ||||||
Sbjct 159433 ATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGACCTCCAGAGTGATGGTCTTT 159374
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141
||||||| || || ||||| | ||||||
Sbjct 159373 CCTGTCAGGGTCTTCACGAAAATCTGCATT 159344
Score = 138 bits (152), Expect = 3e-27
Identities = 156/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || ||||| || || || || || ||||| |||| ||||| | ||||| ||
Sbjct 159325 ACCAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTCC 159266
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || ||||||||||| || || || |||||||| |||||||| || || |||
Sbjct 159265 AGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGGATGCCTTCCTTATCCTGA 159206
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| ||||||||||| || || || || || || || || | ||||||
Sbjct 159205 ATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGACCTCCAGAGTGATGGTCTTT 159146
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||||| || || ||||| | |||||
Sbjct 159145 CCTGTCAGGGTCTTCACGAAAATCTGCAT 159117
>seq122
Length=254344
Score = 134 bits (148), Expect = 3e-26
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || ||||| || || || || || |||| || || | || ||||| |||||
Sbjct 68475 GTGCAGGGTCGACTCCTTCTGGATGTTATAGTCGGACAGGGTACGTCCGTCTTCCAGCTG 68534
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| | || || || ||||| |||||||| || ||||| || || ||
Sbjct 68535 CTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGATCTT 68594
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
|||||||||||| ||||| |||||| ||||| || || || | |||||| || ||
Sbjct 68595 GGCCTTGACGTTCTCGATGGTATCCGAAGGCTCCACCTCCAGAGTGATCGTCTTGCCAGT 68654
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
||| || || ||||| | |||||
Sbjct 68655 CAACGTCTTCACGAAGATCTGCAT 68678
>seq111
Length=461598
Score = 134 bits (148), Expect = 3e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || ||||| || || || || ||||||||||| |||| ||||| | || |||||
Sbjct 359670 ACCAGATGAAGCGTCGATTCCTTCTGAATATTGTAGTCGGACAGAGTACGTCCGTCTTCC 359729
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || ||||||||||| || || || || || |||||||| || ||||| ||
Sbjct 359730 AGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCCGGCGGAATGCCCTCCTTGTCCTGG 359789
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| || ||||| || || ||||| || || |||||||| | |||||
Sbjct 359790 ATCTTGGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTGATGGTCTTA 359849
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | ||||| ||||| | |||||
Sbjct 359850 CCCGTGAGGGTTTTGACGAAGATCTGCAT 359878
>seq673
Length=25255
Score = 118 bits (130), Expect = 2e-21
Identities = 158/220 (72%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||| || ||||| || || || ||||| || || || ||||| || | ||| || |
Sbjct 24422 AGTCGCAGCACAAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGG 24481
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|| || || |||||||| || |||||||| || || || || ||||| || || || ||
Sbjct 24482 CCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATTCCCTCC 24541
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
||||| || || || ||| || ||||| ||||||||||| || || || || ||
Sbjct 24542 TTGTCCTGGATCTTCGCCTTCACATTCTCGATGGTGTCCGATGGCTCGACCTCGAGTGTG 24601
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142
| ||||| || || | ||||| ||||| | |||||||
Sbjct 24602 ATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATTT 24641
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109450042182740
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |